Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0513
(749 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 369 e-103
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 36 0.031
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 34 0.094
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 34 0.094
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 34 0.094
Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical p... 31 0.66
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 31 1.2
AC006762-5|AAF60553.2| 684|Caenorhabditis elegans Hypothetical ... 31 1.2
U97407-4|AAB52482.3| 1272|Caenorhabditis elegans P-glycoprotein ... 30 1.5
EF205592-1|ABM92304.1| 1272|Caenorhabditis elegans ABC transport... 30 1.5
AL032656-3|CAD12890.1| 731|Caenorhabditis elegans Hypothetical ... 30 2.0
AF416781-1|AAL38510.1| 731|Caenorhabditis elegans PH domain pro... 30 2.0
AF324505-1|AAL49495.1| 731|Caenorhabditis elegans CED-12 protein. 30 2.0
Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical pr... 29 4.7
L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein ( Caeno... 29 4.7
Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical pr... 28 8.1
X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein ... 28 8.1
AF490975-1|AAQ06433.1| 703|Caenorhabditis elegans ABC7 protein ... 28 8.1
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 369 bits (909), Expect = e-103
Identities = 168/230 (73%), Positives = 198/230 (86%), Gaps = 1/230 (0%)
Frame = +1
Query: 13 IIRLEGDMATIQVYEETSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELT 192
IIRLEGD ATIQVYEETSGVT+GDPVLRTGKPLSVELGPGI+GSIFDGIQRPLKDI ++T
Sbjct: 43 IIRLEGDYATIQVYEETSGVTIGDPVLRTGKPLSVELGPGIMGSIFDGIQRPLKDIADIT 102
Query: 193 QSIYIPKGINVPSLAREVDWEFN-PLNVKVGSHITGGDLYGIVHENTLVKHRMLVPPKAK 369
QSIYIPKG++ +L+RE W+F +++VG H+TGGD+ G V EN L+KH++L+PP A
Sbjct: 103 QSIYIPKGVSTNALSREARWDFVVSKDLRVGGHVTGGDIIGTVDENLLIKHKILLPPSAC 162
Query: 370 GTVTYIAPAGNYKVTDVVLETEFDGERQKYSMLQVWPVRQPRPVTEKLPANHPLLTGQRV 549
GT+T++AP+G Y V D +LE EF G +QK+SMLQ+WPVR PRPVTEKL AN+PLL GQRV
Sbjct: 163 GTITFVAPSGQYTVEDTLLELEFAGRKQKFSMLQIWPVRSPRPVTEKLAANNPLLCGQRV 222
Query: 550 LDSLFPCVQGGTTAIPGAFGCGKTVISQALSKYXNFDVIIYXGCGERXNQ 699
LD+LFPCVQGGTTAIPGAFGCGKTVISQ+LSKY N D IIY GCGER N+
Sbjct: 223 LDALFPCVQGGTTAIPGAFGCGKTVISQSLSKYSNSDAIIYVGCGERGNE 272
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2
Query: 698 KMSEVLRDFPXLTXE 742
+MSEVLRDFP LT E
Sbjct: 272 EMSEVLRDFPELTME 286
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 35.9 bits (79), Expect = 0.031
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +1
Query: 61 TSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYIPKGINVPSLAR 240
T G+ G PV TG P+ + +GP LG I + I P+ + + + P
Sbjct: 125 TEGLVRGQPVADTGDPIKIPVGPETLGRIMNVIGEPIDERGPIASKNFAAIHAEAPEFVE 184
Query: 241 -EVDWEFNPLNVKV 279
V+ E +KV
Sbjct: 185 MSVEQEILVTGIKV 198
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +1
Query: 529 LLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQALSK---YXNFDVIIYXGCGERXNQ 699
L+TG +V+D L P +GG + G G GKTV+ L + ++ G GER +
Sbjct: 192 LVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTRE 251
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 34.3 bits (75), Expect = 0.094
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 13 IIRLEGDMATIQVYEETSGVTVGDPVLR-TGKPLSVELGPGILGSIFDGIQRPL 171
++ + + A +QV+E TSG+ + + TG L + +LG IF+G +P+
Sbjct: 68 VLEISKNKAVVQVFEGTSGIDAKNTICEFTGDILRTPVSEDMLGRIFNGSGKPI 121
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 34.3 bits (75), Expect = 0.094
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +1
Query: 16 IRLEGDMATIQVYEETSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPL 171
+ L+ D + V+ + GD V RTG + V +G G+LG + D + P+
Sbjct: 65 MNLDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPI 116
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 499 VTEKLPANHPLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVIS 630
+ +L P++TG + +DSL P +G I G GKT I+
Sbjct: 137 IIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIA 180
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 34.3 bits (75), Expect = 0.094
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +1
Query: 16 IRLEGDMATIQVYEETSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPL 171
+ L+ D + V+ + GD V RTG + V +G G+LG + D + P+
Sbjct: 92 MNLDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPI 143
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 499 VTEKLPANHPLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVIS 630
+ +L P++TG + +DSL P +G I G GKT I+
Sbjct: 164 IIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIA 207
>Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 31.5 bits (68), Expect = 0.66
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 508 KLPANHPLLTGQRVLDSLFPCVQGG-TTAIPGAFGCGKTVISQALSKYXNFD 660
K+ +P ++L + Q G T A+ G+ GCGK+ I Q L ++ N D
Sbjct: 387 KVEFTYPTRADVKILKGVSLDAQPGQTVALVGSSGCGKSTIIQLLQRFYNPD 438
>Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 31.5 bits (68), Expect = 0.66
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 508 KLPANHPLLTGQRVLDSLFPCVQGG-TTAIPGAFGCGKTVISQALSKYXNFD 660
K+ +P ++L + Q G T A+ G+ GCGK+ I Q L ++ N D
Sbjct: 387 KVEFTYPTRADVKILKGVSLDAQPGQTVALVGSSGCGKSTIIQLLQRFYNPD 438
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 499 VTEKLPANHPLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVIS 630
+ +L P++TG + +DSL P +G I G GKT I+
Sbjct: 129 IIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIA 172
>AC006762-5|AAF60553.2| 684|Caenorhabditis elegans Hypothetical
protein Y42G9A.6a protein.
Length = 684
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 541 QRVLDSLFPCVQGG-TTAIPGAFGCGKTVISQALSK 645
+R+LDS+F + G TAI G G GKT + L+K
Sbjct: 79 KRILDSVFGVARPGEVTAIIGPSGAGKTTLLNVLTK 114
>U97407-4|AAB52482.3| 1272|Caenorhabditis elegans P-glycoprotein
related protein 2 protein.
Length = 1272
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 520 NHPLLTGQRVLDSLFPCVQGG-TTAIPGAFGCGKTVISQALSKYXNFD 660
N+P +VL ++ G T A+ G GCGK+ I L ++ N D
Sbjct: 1036 NYPTRKDTKVLQGFTLDIKAGKTVALVGHSGCGKSTIMGLLERFYNQD 1083
>EF205592-1|ABM92304.1| 1272|Caenorhabditis elegans ABC transporter
PGP-2 protein.
Length = 1272
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 520 NHPLLTGQRVLDSLFPCVQGG-TTAIPGAFGCGKTVISQALSKYXNFD 660
N+P +VL ++ G T A+ G GCGK+ I L ++ N D
Sbjct: 1036 NYPTRKDTKVLQGFTLDIKAGKTVALVGHSGCGKSTIMGLLERFYNQD 1083
>AL032656-3|CAD12890.1| 731|Caenorhabditis elegans Hypothetical
protein Y106G6E.5 protein.
Length = 731
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +1
Query: 253 EFNPLNVKVGSHITGGDLYGIVHENTLVKHRMLVPPKAKGTVTYIAPAGNYKVTDVV 423
E P++ + H+ G + I E T+ HR ++P A TV K+TDVV
Sbjct: 9 ELQPVDTSLPEHVVKGAVV-IDKEFTIWNHRAVIPSNALHTVFITINLLEQKLTDVV 64
>AF416781-1|AAL38510.1| 731|Caenorhabditis elegans PH domain
protein CED-12 protein.
Length = 731
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +1
Query: 253 EFNPLNVKVGSHITGGDLYGIVHENTLVKHRMLVPPKAKGTVTYIAPAGNYKVTDVV 423
E P++ + H+ G + I E T+ HR ++P A TV K+TDVV
Sbjct: 9 ELQPVDTSLPEHVVKGAVV-IDKEFTIWNHRAVIPSNALHTVFITINLLEQKLTDVV 64
>AF324505-1|AAL49495.1| 731|Caenorhabditis elegans CED-12 protein.
Length = 731
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +1
Query: 253 EFNPLNVKVGSHITGGDLYGIVHENTLVKHRMLVPPKAKGTVTYIAPAGNYKVTDVV 423
E P++ + H+ G + I E T+ HR ++P A TV K+TDVV
Sbjct: 9 ELQPVDTSLPEHVVKGAVV-IDKEFTIWNHRAVIPSNALHTVFITINLLEQKLTDVV 64
>Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical
protein C05A9.1 protein.
Length = 1283
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 520 NHPLLTGQRVLDSLFPCVQGGTT-AIPGAFGCGKTVISQALSKYXNFD 660
++P VL + VQGG A+ GA G GK+ + Q L Y N D
Sbjct: 413 SYPTRPDVPVLKEISFNVQGGECIALVGASGSGKSTVIQLLLHYYNID 460
>Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical
protein K11D2.3a protein.
Length = 422
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -1
Query: 152 SKMEPKIPGPSSTDKGFPVRSTGSPTVTPEVSSYTWMVAMSP 27
+ +E IP PS D S GS TPE S++ W + P
Sbjct: 307 NNVEIIIPVPSDADSPKFKTSIGSVKYTPEQSAFVWTIKNFP 348
>L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein (
Caenorhabditis elegans(unc-101) mRNA, complete cds. ).
Length = 422
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -1
Query: 152 SKMEPKIPGPSSTDKGFPVRSTGSPTVTPEVSSYTWMVAMSP 27
+ +E IP PS D S GS TPE S++ W + P
Sbjct: 307 NNVEIIIPVPSDADSPKFKTSIGSVKYTPEQSAFVWTIKNFP 348
>Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical
protein T21E8.1b protein.
Length = 1204
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 520 NHPLLTGQRVLDSLFPCVQGGTT-AIPGAFGCGKTVISQALSKYXNFD 660
++P +VL + VQ G A+ GA G GK+ + Q L Y N D
Sbjct: 330 SYPTRPDAQVLKGISFDVQNGECIALVGASGSGKSTVVQLLLHYYNID 377
>Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.1a protein.
Length = 1263
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 520 NHPLLTGQRVLDSLFPCVQGGTT-AIPGAFGCGKTVISQALSKYXNFD 660
++P +VL + VQ G A+ GA G GK+ + Q L Y N D
Sbjct: 389 SYPTRPDAQVLKGISFDVQNGECIALVGASGSGKSTVVQLLLHYYNID 436
>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.2 protein.
Length = 1263
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 520 NHPLLTGQRVLDSLFPCVQGGTT-AIPGAFGCGKTVISQALSKYXNFD 660
++P +VL + VQ G A+ GA G GK+ + Q L Y N D
Sbjct: 389 SYPTRPDAQVLKGISFDVQNGECIALVGASGSGKSTVVQLLLHYYNID 436
>Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical
protein K08E7.9 protein.
Length = 1321
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 577 GGTTAIPGAFGCGKTVISQALSKYXNFDVI 666
G T A+ G+ GCGK+ I L +Y +DV+
Sbjct: 444 GQTVALVGSSGCGKSTIISLLLRY--YDVL 471
>X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein A
protein.
Length = 1321
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 577 GGTTAIPGAFGCGKTVISQALSKYXNFDVI 666
G T A+ G+ GCGK+ I L +Y +DV+
Sbjct: 444 GQTVALVGSSGCGKSTIISLLLRY--YDVL 471
>AF490975-1|AAQ06433.1| 703|Caenorhabditis elegans ABC7 protein
protein.
Length = 703
Score = 27.9 bits (59), Expect = 8.1
Identities = 27/120 (22%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Frame = +1
Query: 70 VTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYIPKGINVPSLAREVD 249
+T+GD +L + + LGS++ +++ L D+N++ + + I + A+ ++
Sbjct: 367 LTIGDLILANTLLFQLSIPLNFLGSVYREVRQGLVDMNQMFSLLTLKPKIVEAADAKRLE 426
Query: 250 WEFNPLNVKVGS-HITGGDLYGIVHENTLVKHRMLVPPKAKGTVTYIAPAGNYKVTDVVL 426
N +++K + H +G + E ++K L P K V + +G+ K T V L
Sbjct: 427 IVDNDISLKFENVH------FGYLPEKPILKGLDLEIPVGK-KVAIVGGSGSGKSTIVRL 479
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.140 0.421
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,181,642
Number of Sequences: 27780
Number of extensions: 396037
Number of successful extensions: 1329
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1328
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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