BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0509 (750 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 308 7e-84 AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 308 7e-84 AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 308 7e-84 AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 308 7e-84 AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 308 7e-84 AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi p... 64 3e-10 AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA... 64 3e-10 BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p pro... 48 2e-05 AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar pr... 48 2e-05 AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA... 48 2e-05 M89628-1|AAB00734.1| 661|Drosophila melanogaster retinal degene... 32 0.73 BT015959-1|AAV36844.1| 603|Drosophila melanogaster RH46370p pro... 32 0.73 AE014296-3312|AAF49044.2| 603|Drosophila melanogaster CG6571-PA... 32 0.73 AE014296-3311|AAO41219.1| 661|Drosophila melanogaster CG6571-PD... 32 0.73 AE014296-3310|AAO41218.1| 661|Drosophila melanogaster CG6571-PC... 32 0.73 AE014296-3309|AAO41217.1| 661|Drosophila melanogaster CG6571-PB... 32 0.73 >X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein L7a protein. Length = 271 Score = 308 bits (755), Expect = 7e-84 Identities = 144/212 (67%), Positives = 167/212 (78%) Frame = +3 Query: 99 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 278 N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93 Query: 279 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 458 KTTA LFK+LEKYRPE+ +P+ + +GTNTVTKL+E Sbjct: 94 KTTAVKLFKLLEKYRPESALAKNVRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153 Query: 459 KKXAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVE 638 +K AQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG LV RKTCT LALT V+ Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVD 213 Query: 639 SGDRAXXSKVVEAIKTNFNERYEELXKXWGXG 734 + D+A KV+EA+KTNFNER+EE+ + WG G Sbjct: 214 NNDKANFGKVLEAVKTNFNERHEEIRRHWGGG 245 >AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p protein. Length = 271 Score = 308 bits (755), Expect = 7e-84 Identities = 144/212 (67%), Positives = 167/212 (78%) Frame = +3 Query: 99 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 278 N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93 Query: 279 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 458 KTTA LFK+LEKYRPE+ +P+ + +GTNTVTKL+E Sbjct: 94 KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153 Query: 459 KKXAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVE 638 +K AQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG LV RKTCT LALT V+ Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVD 213 Query: 639 SGDRAXXSKVVEAIKTNFNERYEELXKXWGXG 734 + D+A KV+EA+KTNFNER+EE+ + WG G Sbjct: 214 NNDKANFGKVLEAVKTNFNERHEEIRRHWGGG 245 >AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD, isoform D protein. Length = 271 Score = 308 bits (755), Expect = 7e-84 Identities = 144/212 (67%), Positives = 167/212 (78%) Frame = +3 Query: 99 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 278 N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93 Query: 279 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 458 KTTA LFK+LEKYRPE+ +P+ + +GTNTVTKL+E Sbjct: 94 KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153 Query: 459 KKXAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVE 638 +K AQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG LV RKTCT LALT V+ Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVD 213 Query: 639 SGDRAXXSKVVEAIKTNFNERYEELXKXWGXG 734 + D+A KV+EA+KTNFNER+EE+ + WG G Sbjct: 214 NNDKANFGKVLEAVKTNFNERHEEIRRHWGGG 245 >AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC, isoform C protein. Length = 271 Score = 308 bits (755), Expect = 7e-84 Identities = 144/212 (67%), Positives = 167/212 (78%) Frame = +3 Query: 99 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 278 N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93 Query: 279 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 458 KTTA LFK+LEKYRPE+ +P+ + +GTNTVTKL+E Sbjct: 94 KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153 Query: 459 KKXAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVE 638 +K AQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG LV RKTCT LALT V+ Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVD 213 Query: 639 SGDRAXXSKVVEAIKTNFNERYEELXKXWGXG 734 + D+A KV+EA+KTNFNER+EE+ + WG G Sbjct: 214 NNDKANFGKVLEAVKTNFNERHEEIRRHWGGG 245 >AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA, isoform A protein. Length = 271 Score = 308 bits (755), Expect = 7e-84 Identities = 144/212 (67%), Positives = 167/212 (78%) Frame = +3 Query: 99 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 278 N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93 Query: 279 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 458 KTTA LFK+LEKYRPE+ +P+ + +GTNTVTKL+E Sbjct: 94 KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153 Query: 459 KKXAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVE 638 +K AQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG LV RKTCT LALT V+ Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVD 213 Query: 639 SGDRAXXSKVVEAIKTNFNERYEELXKXWGXG 734 + D+A KV+EA+KTNFNER+EE+ + WG G Sbjct: 214 NNDKANFGKVLEAVKTNFNERHEEIRRHWGGG 245 >AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi protein. Length = 127 Score = 63.7 bits (148), Expect = 3e-10 Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 2/92 (2%) Frame = +3 Query: 414 NTIRSGTNTVTKLVEKKXAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGAL 593 N +R G N TK + + A +VV+A D +PIE++L LP LC VPY V+ K LG Sbjct: 32 NQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALGRA 91 Query: 594 --VHRKTCTCLALTNVESGDRAXXSKVVEAIK 683 V R C TN S ++ + + + I+ Sbjct: 92 CGVSRPIVACSVTTNEGSQLKSQITSIQQEIE 123 >AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA protein. Length = 127 Score = 63.7 bits (148), Expect = 3e-10 Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 2/92 (2%) Frame = +3 Query: 414 NTIRSGTNTVTKLVEKKXAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGAL 593 N +R G N TK + + A +VV+A D +PIE++L LP LC VPY V+ K LG Sbjct: 32 NQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALGRA 91 Query: 594 --VHRKTCTCLALTNVESGDRAXXSKVVEAIK 683 V R C TN S ++ + + + I+ Sbjct: 92 CGVSRPIVACSVTTNEGSQLKSQITSIQQEIE 123 >BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p protein. Length = 160 Score = 47.6 bits (108), Expect = 2e-05 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%) Frame = +3 Query: 420 IRSGTNTVTKLVEKKXAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGAL-- 593 +R+G V + K + + A DV P++++ LPA+C + G+PY ++ LGA Sbjct: 67 LRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMG 126 Query: 594 VHRKTCTCLALTNVESGD 647 V R T L N E D Sbjct: 127 VKRGTVALLVRQNEEYKD 144 >AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar protein NHP2 protein. Length = 160 Score = 47.6 bits (108), Expect = 2e-05 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%) Frame = +3 Query: 420 IRSGTNTVTKLVEKKXAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGAL-- 593 +R+G V + K + + A DV P++++ LPA+C + G+PY ++ LGA Sbjct: 67 LRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMG 126 Query: 594 VHRKTCTCLALTNVESGD 647 V R T L N E D Sbjct: 127 VKRGTVALLVRQNEEYKD 144 >AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA protein. Length = 160 Score = 47.6 bits (108), Expect = 2e-05 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%) Frame = +3 Query: 420 IRSGTNTVTKLVEKKXAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGAL-- 593 +R+G V + K + + A DV P++++ LPA+C + G+PY ++ LGA Sbjct: 67 LRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMG 126 Query: 594 VHRKTCTCLALTNVESGD 647 V R T L N E D Sbjct: 127 VKRGTVALLVRQNEEYKD 144 >M89628-1|AAB00734.1| 661|Drosophila melanogaster retinal degeneration C protein protein. Length = 661 Score = 32.3 bits (70), Expect = 0.73 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = +3 Query: 408 RPNTIRSGTNTVTKLVEKKXAQLVVIAHDVDPIE 509 RP+ ++ T+ VT L +K +V+ HD+DP + Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650 >BT015959-1|AAV36844.1| 603|Drosophila melanogaster RH46370p protein. Length = 603 Score = 32.3 bits (70), Expect = 0.73 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = +3 Query: 408 RPNTIRSGTNTVTKLVEKKXAQLVVIAHDVDPIE 509 RP+ ++ T+ VT L +K +V+ HD+DP + Sbjct: 559 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 592 >AE014296-3312|AAF49044.2| 603|Drosophila melanogaster CG6571-PA, isoform A protein. Length = 603 Score = 32.3 bits (70), Expect = 0.73 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = +3 Query: 408 RPNTIRSGTNTVTKLVEKKXAQLVVIAHDVDPIE 509 RP+ ++ T+ VT L +K +V+ HD+DP + Sbjct: 559 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 592 >AE014296-3311|AAO41219.1| 661|Drosophila melanogaster CG6571-PD, isoform D protein. Length = 661 Score = 32.3 bits (70), Expect = 0.73 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = +3 Query: 408 RPNTIRSGTNTVTKLVEKKXAQLVVIAHDVDPIE 509 RP+ ++ T+ VT L +K +V+ HD+DP + Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650 >AE014296-3310|AAO41218.1| 661|Drosophila melanogaster CG6571-PC, isoform C protein. Length = 661 Score = 32.3 bits (70), Expect = 0.73 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = +3 Query: 408 RPNTIRSGTNTVTKLVEKKXAQLVVIAHDVDPIE 509 RP+ ++ T+ VT L +K +V+ HD+DP + Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650 >AE014296-3309|AAO41217.1| 661|Drosophila melanogaster CG6571-PB, isoform B protein. Length = 661 Score = 32.3 bits (70), Expect = 0.73 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = +3 Query: 408 RPNTIRSGTNTVTKLVEKKXAQLVVIAHDVDPIE 509 RP+ ++ T+ VT L +K +V+ HD+DP + Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 32,206,019 Number of Sequences: 53049 Number of extensions: 665498 Number of successful extensions: 2251 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 2109 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2246 length of database: 24,988,368 effective HSP length: 83 effective length of database: 20,585,301 effective search space used: 3417159966 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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