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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0509
         (750 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal prot...   308   7e-84
AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p pro...   308   7e-84
AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,...   308   7e-84
AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,...   308   7e-84
AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,...   308   7e-84
AF208396-1|AAF20209.1|  127|Drosophila melanogaster Hoi-polloi p...    64   3e-10
AE014134-1677|AAF52798.2|  127|Drosophila melanogaster CG3949-PA...    64   3e-10
BT023752-1|AAZ41760.1|  160|Drosophila melanogaster RH66170p pro...    48   2e-05
AF217228-1|AAF27630.1|  160|Drosophila melanogaster nucleolar pr...    48   2e-05
AE014296-2434|AAF49701.1|  160|Drosophila melanogaster CG5258-PA...    48   2e-05
M89628-1|AAB00734.1|  661|Drosophila melanogaster retinal degene...    32   0.73 
BT015959-1|AAV36844.1|  603|Drosophila melanogaster RH46370p pro...    32   0.73 
AE014296-3312|AAF49044.2|  603|Drosophila melanogaster CG6571-PA...    32   0.73 
AE014296-3311|AAO41219.1|  661|Drosophila melanogaster CG6571-PD...    32   0.73 
AE014296-3310|AAO41218.1|  661|Drosophila melanogaster CG6571-PC...    32   0.73 
AE014296-3309|AAO41217.1|  661|Drosophila melanogaster CG6571-PB...    32   0.73 

>X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal protein
           L7a protein.
          Length = 271

 Score =  308 bits (755), Expect = 7e-84
 Identities = 144/212 (67%), Positives = 167/212 (78%)
 Frame = +3

Query: 99  NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 278
           N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34  NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93

Query: 279 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 458
           KTTA  LFK+LEKYRPE+                         +P+ + +GTNTVTKL+E
Sbjct: 94  KTTAVKLFKLLEKYRPESALAKNVRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153

Query: 459 KKXAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVE 638
           +K AQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG LV RKTCT LALT V+
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVD 213

Query: 639 SGDRAXXSKVVEAIKTNFNERYEELXKXWGXG 734
           + D+A   KV+EA+KTNFNER+EE+ + WG G
Sbjct: 214 NNDKANFGKVLEAVKTNFNERHEEIRRHWGGG 245


>AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p
           protein.
          Length = 271

 Score =  308 bits (755), Expect = 7e-84
 Identities = 144/212 (67%), Positives = 167/212 (78%)
 Frame = +3

Query: 99  NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 278
           N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34  NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93

Query: 279 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 458
           KTTA  LFK+LEKYRPE+                         +P+ + +GTNTVTKL+E
Sbjct: 94  KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153

Query: 459 KKXAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVE 638
           +K AQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG LV RKTCT LALT V+
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVD 213

Query: 639 SGDRAXXSKVVEAIKTNFNERYEELXKXWGXG 734
           + D+A   KV+EA+KTNFNER+EE+ + WG G
Sbjct: 214 NNDKANFGKVLEAVKTNFNERHEEIRRHWGGG 245


>AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,
           isoform D protein.
          Length = 271

 Score =  308 bits (755), Expect = 7e-84
 Identities = 144/212 (67%), Positives = 167/212 (78%)
 Frame = +3

Query: 99  NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 278
           N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34  NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93

Query: 279 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 458
           KTTA  LFK+LEKYRPE+                         +P+ + +GTNTVTKL+E
Sbjct: 94  KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153

Query: 459 KKXAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVE 638
           +K AQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG LV RKTCT LALT V+
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVD 213

Query: 639 SGDRAXXSKVVEAIKTNFNERYEELXKXWGXG 734
           + D+A   KV+EA+KTNFNER+EE+ + WG G
Sbjct: 214 NNDKANFGKVLEAVKTNFNERHEEIRRHWGGG 245


>AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,
           isoform C protein.
          Length = 271

 Score =  308 bits (755), Expect = 7e-84
 Identities = 144/212 (67%), Positives = 167/212 (78%)
 Frame = +3

Query: 99  NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 278
           N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34  NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93

Query: 279 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 458
           KTTA  LFK+LEKYRPE+                         +P+ + +GTNTVTKL+E
Sbjct: 94  KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153

Query: 459 KKXAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVE 638
           +K AQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG LV RKTCT LALT V+
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVD 213

Query: 639 SGDRAXXSKVVEAIKTNFNERYEELXKXWGXG 734
           + D+A   KV+EA+KTNFNER+EE+ + WG G
Sbjct: 214 NNDKANFGKVLEAVKTNFNERHEEIRRHWGGG 245


>AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,
           isoform A protein.
          Length = 271

 Score =  308 bits (755), Expect = 7e-84
 Identities = 144/212 (67%), Positives = 167/212 (78%)
 Frame = +3

Query: 99  NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 278
           N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34  NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93

Query: 279 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 458
           KTTA  LFK+LEKYRPE+                         +P+ + +GTNTVTKL+E
Sbjct: 94  KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153

Query: 459 KKXAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVE 638
           +K AQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG LV RKTCT LALT V+
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVD 213

Query: 639 SGDRAXXSKVVEAIKTNFNERYEELXKXWGXG 734
           + D+A   KV+EA+KTNFNER+EE+ + WG G
Sbjct: 214 NNDKANFGKVLEAVKTNFNERHEEIRRHWGGG 245


>AF208396-1|AAF20209.1|  127|Drosophila melanogaster Hoi-polloi
           protein.
          Length = 127

 Score = 63.7 bits (148), Expect = 3e-10
 Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
 Frame = +3

Query: 414 NTIRSGTNTVTKLVEKKXAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGAL 593
           N +R G N  TK + +  A +VV+A D +PIE++L LP LC    VPY  V+ K  LG  
Sbjct: 32  NQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALGRA 91

Query: 594 --VHRKTCTCLALTNVESGDRAXXSKVVEAIK 683
             V R    C   TN  S  ++  + + + I+
Sbjct: 92  CGVSRPIVACSVTTNEGSQLKSQITSIQQEIE 123


>AE014134-1677|AAF52798.2|  127|Drosophila melanogaster CG3949-PA
           protein.
          Length = 127

 Score = 63.7 bits (148), Expect = 3e-10
 Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
 Frame = +3

Query: 414 NTIRSGTNTVTKLVEKKXAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGAL 593
           N +R G N  TK + +  A +VV+A D +PIE++L LP LC    VPY  V+ K  LG  
Sbjct: 32  NQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALGRA 91

Query: 594 --VHRKTCTCLALTNVESGDRAXXSKVVEAIK 683
             V R    C   TN  S  ++  + + + I+
Sbjct: 92  CGVSRPIVACSVTTNEGSQLKSQITSIQQEIE 123


>BT023752-1|AAZ41760.1|  160|Drosophila melanogaster RH66170p
           protein.
          Length = 160

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
 Frame = +3

Query: 420 IRSGTNTVTKLVEKKXAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGAL-- 593
           +R+G   V   + K    + + A DV P++++  LPA+C + G+PY     ++ LGA   
Sbjct: 67  LRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMG 126

Query: 594 VHRKTCTCLALTNVESGD 647
           V R T   L   N E  D
Sbjct: 127 VKRGTVALLVRQNEEYKD 144


>AF217228-1|AAF27630.1|  160|Drosophila melanogaster nucleolar
           protein NHP2 protein.
          Length = 160

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
 Frame = +3

Query: 420 IRSGTNTVTKLVEKKXAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGAL-- 593
           +R+G   V   + K    + + A DV P++++  LPA+C + G+PY     ++ LGA   
Sbjct: 67  LRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMG 126

Query: 594 VHRKTCTCLALTNVESGD 647
           V R T   L   N E  D
Sbjct: 127 VKRGTVALLVRQNEEYKD 144


>AE014296-2434|AAF49701.1|  160|Drosophila melanogaster CG5258-PA
           protein.
          Length = 160

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
 Frame = +3

Query: 420 IRSGTNTVTKLVEKKXAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGAL-- 593
           +R+G   V   + K    + + A DV P++++  LPA+C + G+PY     ++ LGA   
Sbjct: 67  LRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMG 126

Query: 594 VHRKTCTCLALTNVESGD 647
           V R T   L   N E  D
Sbjct: 127 VKRGTVALLVRQNEEYKD 144


>M89628-1|AAB00734.1|  661|Drosophila melanogaster retinal
           degeneration C protein protein.
          Length = 661

 Score = 32.3 bits (70), Expect = 0.73
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +3

Query: 408 RPNTIRSGTNTVTKLVEKKXAQLVVIAHDVDPIE 509
           RP+  ++ T+ VT L +K     +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650


>BT015959-1|AAV36844.1|  603|Drosophila melanogaster RH46370p
           protein.
          Length = 603

 Score = 32.3 bits (70), Expect = 0.73
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +3

Query: 408 RPNTIRSGTNTVTKLVEKKXAQLVVIAHDVDPIE 509
           RP+  ++ T+ VT L +K     +V+ HD+DP +
Sbjct: 559 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 592


>AE014296-3312|AAF49044.2|  603|Drosophila melanogaster CG6571-PA,
           isoform A protein.
          Length = 603

 Score = 32.3 bits (70), Expect = 0.73
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +3

Query: 408 RPNTIRSGTNTVTKLVEKKXAQLVVIAHDVDPIE 509
           RP+  ++ T+ VT L +K     +V+ HD+DP +
Sbjct: 559 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 592


>AE014296-3311|AAO41219.1|  661|Drosophila melanogaster CG6571-PD,
           isoform D protein.
          Length = 661

 Score = 32.3 bits (70), Expect = 0.73
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +3

Query: 408 RPNTIRSGTNTVTKLVEKKXAQLVVIAHDVDPIE 509
           RP+  ++ T+ VT L +K     +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650


>AE014296-3310|AAO41218.1|  661|Drosophila melanogaster CG6571-PC,
           isoform C protein.
          Length = 661

 Score = 32.3 bits (70), Expect = 0.73
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +3

Query: 408 RPNTIRSGTNTVTKLVEKKXAQLVVIAHDVDPIE 509
           RP+  ++ T+ VT L +K     +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650


>AE014296-3309|AAO41217.1|  661|Drosophila melanogaster CG6571-PB,
           isoform B protein.
          Length = 661

 Score = 32.3 bits (70), Expect = 0.73
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +3

Query: 408 RPNTIRSGTNTVTKLVEKKXAQLVVIAHDVDPIE 509
           RP+  ++ T+ VT L +K     +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,206,019
Number of Sequences: 53049
Number of extensions: 665498
Number of successful extensions: 2251
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2246
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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