Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0507
         (720 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    67   6e-13
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    26   1.4  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      24   5.4  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 66.9 bits (156), Expect = 6e-13
 Identities = 31/76 (40%), Positives = 47/76 (61%)
 Frame = +3

Query: 360 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQT 539
           +V VSG    + ++ FE +   + V   V+   Y +PTPIQ    PI ++G++L+  AQT
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQT 220

Query: 540 GSGKTLAYILPAIVHI 587
           GSGKT A++LP I H+
Sbjct: 221 GSGKTAAFMLPMIHHL 236


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +3

Query: 495 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRXGDG 620
           P+A + K L   AQ  + ++   I  A+V +  Q  +R  DG
Sbjct: 451 PVASNYKTLNYKAQKAAARSHVKIFKALVRLRKQRTLRRNDG 492


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
 Frame = -1

Query: 249 GVACFARQRIIFSHQSIQILXXYCHRC-QXETNXRXICCLLQIWNXRFHG 103
           G +CF     +   ++ Q++  Y H C   E     + C +   + + HG
Sbjct: 94  GGSCFVSVEAVLDEETKQLVPEYSHGCMSPEQGGGLLQCKVGTVSPQLHG 143


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,770
Number of Sequences: 2352
Number of extensions: 14385
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)