Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0507
         (720 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       76   4e-16
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    25   0.54 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   5.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   5.1  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   8.9  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   8.9  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   8.9  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 75.8 bits (178), Expect = 4e-16
 Identities = 35/73 (47%), Positives = 47/73 (64%)
 Frame = +3

Query: 360 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQT 539
           +V VSG  V  PI+ FE A   + V   +K  GYK+PTP+Q    PI M+G++L+  AQT
Sbjct: 183 QVNVSGDNVPQPIESFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDLMACAQT 242

Query: 540 GSGKTLAYILPAI 578
           GSGKT A+ +P I
Sbjct: 243 GSGKTAAFAVPII 255


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 25.4 bits (53), Expect = 0.54
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +2

Query: 467 TDAHSSSRLADSYVWKEFSWRSPNGF 544
           +D+ +  +L + Y WK   +  PNG+
Sbjct: 16  SDSQAQEKLKNIYSWKALEFAFPNGY 41


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -2

Query: 257 PIWASHVLPARELFFP 210
           P+W  H+   R + FP
Sbjct: 634 PVWGRHIYDGRAMGFP 649


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -2

Query: 257 PIWASHVLPARELFFP 210
           P+W  H+   R + FP
Sbjct: 634 PVWGRHIYDGRAMGFP 649


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 260 IPIWASHVLPARELFFPT 207
           +P W +++ P  ELF  T
Sbjct: 191 LPSWTNNIFPRGELFDAT 208


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 260 IPIWASHVLPARELFFPT 207
           +P W +++ P  ELF  T
Sbjct: 206 LPSWTNNIFPRGELFDAT 223


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 260 IPIWASHVLPARELFFPT 207
           +P W +++ P  ELF  T
Sbjct: 94  LPSWTNNIFPKGELFDAT 111


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,348
Number of Sequences: 438
Number of extensions: 3855
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)