Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0506
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.4  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    23   2.4  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   3.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   5.5  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = +1

Query: 118 FDMANNRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGE---PENTSGDMDNFYEV 288
           FD+  N+  K+      +R       EEL  E L +I+ +      P N S +M    ++
Sbjct: 338 FDLFENKKRKNNIKLYVRRVFIMDNCEELIPEYLNFIKGVVDSEDLPLNISREMLQQNKI 397

Query: 289 LK 294
           LK
Sbjct: 398 LK 399


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 520 AGTYGKPSIGPKEAEKNVRNFSE 588
           AGTYG    GP   E  V  ++E
Sbjct: 280 AGTYGGSDAGPYTREMGVIGYNE 302


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -2

Query: 468 LPQVDSLKSFLRRYTQLS 415
           +PQ++ + +FL+R+T  S
Sbjct: 299 IPQLEEMSNFLKRHTGFS 316


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = +2

Query: 368 WPSSAWRISTLSSKPQDSWVYRR 436
           W   A   S L  +P D W Y +
Sbjct: 220 WAGFADSHSPLYKRPHDQWAYEK 242


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,482
Number of Sequences: 336
Number of extensions: 3971
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)