Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0506
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          31   0.046
Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    25   2.3  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    24   5.3  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   7.0  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   7.0  
AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14...    23   7.0  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   9.2  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   9.2  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   9.2  

>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 30.7 bits (66), Expect = 0.046
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +3

Query: 219 GMDSDDHRRTREHLRGYGQLLRSA*RRHSSVQASQQHPPEHDQKDQ 356
           G D DD+RRT +  RG G+  +    RHS   +S +H     ++D+
Sbjct: 606 GYDRDDYRRTEKDYRGNGKHDKYGSSRHS--DSSSRHRSSKHERDR 649


>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 548 DRKKLRRTCETSPRSSSRLVR 610
           + +KLRRT E + +SS+ LVR
Sbjct: 337 ETEKLRRTVEQTGKSSAELVR 357


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 228 SDDHRRTREHL-RGYGQLLRSA*RRHSSVQASQQH 329
           ++  RR RE   +   + L+SA + HS  QA Q+H
Sbjct: 204 NEQARREREEQDKMKNESLKSAQQHHSQKQAQQEH 238


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +3

Query: 231  DDHRRTREHLRGYGQLLRSA*RRHSSVQASQQHPPEHDQKDQHIVDG 371
            +D RRT E  + + +  R+  +R+   Q +   PP   ++   + DG
Sbjct: 1103 EDERRTEERRQLHNEANRAYRQRNRRSQPTPPAPPPTPREAARLEDG 1149


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = -2

Query: 504 LQADHDGVEILS---LPQVDSLKSFLRRYTQLSCGFEESVDILHALE 373
           LQ DH+ +  L+      +DSLK    +Y +++     + D LH L+
Sbjct: 845 LQLDHNLLTALNGFEFEGLDSLKELFLQYNRIASIANHTFDHLHGLK 891


>AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14D2
           protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 8/25 (32%), Positives = 10/25 (40%)
 Frame = -3

Query: 605 PAGSCSSEKFRTFFSASFGPIDGFP 531
           P G C   +          PIDG+P
Sbjct: 103 PPGECGKMQMDRIVGGEVAPIDGYP 127


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 17/66 (25%), Positives = 23/66 (34%)
 Frame = +3

Query: 303 SSVQASQQHPPEHDQKDQHIVDGLQVHGEYQRFPRSRKTVGCTGAGNFSNCRPVGETESQ 482
           S  Q SQQHP    Q+  H       H ++          G  G G   +  PV +    
Sbjct: 262 SHQQQSQQHPSSQHQQPTHQTHHHHHHHQHGGGVGGGGGGGGGGGGGGGSAGPVQQPSRS 321

Query: 483 LRRDLL 500
              DL+
Sbjct: 322 ASIDLM 327


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 17/66 (25%), Positives = 23/66 (34%)
 Frame = +3

Query: 303 SSVQASQQHPPEHDQKDQHIVDGLQVHGEYQRFPRSRKTVGCTGAGNFSNCRPVGETESQ 482
           S  Q SQQHP    Q+  H       H ++          G  G G   +  PV +    
Sbjct: 262 SHQQQSQQHPSSQHQQPTHQTHHHHHHHQHGGGVGGGGGGGGGGGGGGGSAGPVQQPSRS 321

Query: 483 LRRDLL 500
              DL+
Sbjct: 322 ASIDLM 327


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 17/66 (25%), Positives = 23/66 (34%)
 Frame = +3

Query: 303 SSVQASQQHPPEHDQKDQHIVDGLQVHGEYQRFPRSRKTVGCTGAGNFSNCRPVGETESQ 482
           S  Q SQQHP    Q+  H       H ++          G  G G   +  PV +    
Sbjct: 214 SHQQQSQQHPSSQHQQPTHQTHHHHHHHQHGGGVGGGGGGGGGGGGGGGSAGPVQQPSRS 273

Query: 483 LRRDLL 500
              DL+
Sbjct: 274 ASIDLM 279


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 797,085
Number of Sequences: 2352
Number of extensions: 16559
Number of successful extensions: 32
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)