Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0506
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical pr... 202 2e-52
AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein. 202 2e-52
U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protei... 131 4e-31
AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin prot... 111 6e-25
AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin prot... 106 2e-23
U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav (... 46 2e-05
U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav (... 46 2e-05
DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein. 46 2e-05
U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical pr... 32 0.34
U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical pr... 29 2.4
U42844-6|AAB53814.1| 344|Caenorhabditis elegans Hypothetical pr... 29 4.2
AC084153-10|AAK84591.1| 184|Caenorhabditis elegans Hypothetical... 28 5.6
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 28 7.4
AF024502-7|AAB70377.3| 352|Caenorhabditis elegans Hypothetical ... 28 7.4
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 28 7.4
Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical p... 27 9.8
AF039041-2|AAP46270.1| 587|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical
protein F43G9.9 protein.
Length = 192
Score = 202 bits (493), Expect = 2e-52
Identities = 99/188 (52%), Positives = 135/188 (71%), Gaps = 1/188 (0%)
Frame = +1
Query: 127 ANNRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGEPENTSGDMDNFYEVLKDGTL 306
+++RA KSG A EAQ+KI KY + LA E L+W++ +TG+ +T GD DN +V +DG+L
Sbjct: 6 SSDRAEKSGIALEAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVFQDGSL 65
Query: 307 LCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNS 486
LC LAN++ P +KK+NTS+MAFK MENI+ FL+ A + V E FQTVDL+E Q+ N+
Sbjct: 66 LCTLANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNA 124
Query: 487 VVICLQSLGRKA-GTYGKPSIGPKEAEKNVRNFSEEQLPAGQGVISLQYGSNXGANQSGI 663
V+ICL SL RK+ +G+ +GPKEA+ + R +++EQL AG VI LQ GSN GA SG+
Sbjct: 125 VLICLASLARKSEKNFGRSGLGPKEAQGDRREWTDEQLKAGHNVIGLQMGSNKGATASGL 184
Query: 664 NFGXTRHM 687
N G TRHM
Sbjct: 185 NMGNTRHM 192
>AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein.
Length = 192
Score = 202 bits (493), Expect = 2e-52
Identities = 99/188 (52%), Positives = 135/188 (71%), Gaps = 1/188 (0%)
Frame = +1
Query: 127 ANNRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGEPENTSGDMDNFYEVLKDGTL 306
+++RA KSG A EAQ+KI KY + LA E L+W++ +TG+ +T GD DN +V +DG+L
Sbjct: 6 SSDRAEKSGIALEAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVFQDGSL 65
Query: 307 LCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNS 486
LC LAN++ P +KK+NTS+MAFK MENI+ FL+ A + V E FQTVDL+E Q+ N+
Sbjct: 66 LCTLANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNA 124
Query: 487 VVICLQSLGRKA-GTYGKPSIGPKEAEKNVRNFSEEQLPAGQGVISLQYGSNXGANQSGI 663
V+ICL SL RK+ +G+ +GPKEA+ + R +++EQL AG VI LQ GSN GA SG+
Sbjct: 125 VLICLASLARKSEKNFGRSGLGPKEAQGDRREWTDEQLKAGHNVIGLQMGSNKGATASGL 184
Query: 664 NFGXTRHM 687
N G TRHM
Sbjct: 185 NMGNTRHM 192
>U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protein 3
protein.
Length = 142
Score = 131 bits (317), Expect = 4e-31
Identities = 66/135 (48%), Positives = 89/135 (65%)
Frame = +1
Query: 133 NRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGEPENTSGDMDNFYEVLKDGTLLC 312
NR T G ++K +SK+ ++ A LEWI+ ++GE +TSG+ DNF+ +LKDGTLLC
Sbjct: 3 NRTTAGGIGFAVRQKQDSKFIDKEATLLLEWIKKLSGENISTSGERDNFHNLLKDGTLLC 62
Query: 313 KLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVV 492
K AN I IKK+ F CMENINAF+E A++ GVP +ETFQ+V+L E ++L SV
Sbjct: 63 KAANGIEAGSIKKVQKPISTFACMENINAFVEFAKKQGVPNEETFQSVELVEGRDLFSVC 122
Query: 493 ICLQSLGRKAGTYGK 537
+ L SLGR GK
Sbjct: 123 VTLLSLGRVLQKAGK 137
>AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin protein
4 protein.
Length = 154
Score = 111 bits (266), Expect = 6e-25
Identities = 64/146 (43%), Positives = 82/146 (56%)
Frame = +1
Query: 133 NRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGEPENTSGDMDNFYEVLKDGTLLC 312
+R +G A K SK+++ A LEWIR +T E + DNF E LKDG LC
Sbjct: 6 HRPRPAGMAGAILDKQASKFNDVEAGYLLEWIRDLTKEDFDCEASRDNFREQLKDGQRLC 65
Query: 313 KLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVV 492
KL N I +KKI F C+ENIN F AAR LGV +ETFQ+VDL++ ++L SV
Sbjct: 66 KLVNAIKAGSVKKIMKPISNFNCLENINQFSTAARSLGVKDEETFQSVDLFDGRDLFSVT 125
Query: 493 ICLQSLGRKAGTYGKPSIGPKEAEKN 570
+ LQSL RK G PK+ K+
Sbjct: 126 VTLQSLARKVEKLG--ITPPKQVSKD 149
>AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin protein
2 protein.
Length = 203
Score = 106 bits (254), Expect = 2e-23
Identities = 70/195 (35%), Positives = 101/195 (51%), Gaps = 10/195 (5%)
Frame = +1
Query: 133 NRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGE----PENTSGDMDNFYEVLKDG 300
N G + E Q+K ++++ E A E L+WI +TGE T + +LKDG
Sbjct: 3 NHGPSYGLSRELQKKNDARFVLEEAIEVLKWIENVTGERFSFDVTTCESSTDVSNLLKDG 62
Query: 301 TLLCKLANNIHPNMIKKINTS-SMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQN 477
+LCKL + P+ N MAF MENI+ FL AA+Q GV FQTVDL+E +
Sbjct: 63 VMLCKLIEKLDPSCRVVYNKKPKMAFPMMENISNFLAAAKQFGVMEISCFQTVDLYENKQ 122
Query: 478 LNSVVICLQSLGRKAGTYGK----PSIGPKEAEKNVRNFSEEQLPAGQGVISLQYGSNXG 645
V+ CL+ L A + P+ K A+ + R F E + G+ VI LQYG+N
Sbjct: 123 CYKVIECLRLLAAVAQSRSSHLEHPAWVVKLAQSSPRQFPEAVMRRGEMVIPLQYGTNKC 182
Query: 646 ANQSGIN-FGXTRHM 687
A+Q G++ +G R +
Sbjct: 183 ASQKGMSPYGLPRQI 197
>U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform a protein.
Length = 975
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Frame = +1
Query: 223 WIRMITGEPENTSGDMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMEN 390
W+R + + +G M F VL+DG LLC+LAN + PN I KKI ++ F C N
Sbjct: 14 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNN 73
Query: 391 INAF-LEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSL 510
IN F + + + F DL+ V+ L L
Sbjct: 74 INYFAMFCKTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFL 114
>U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform b protein.
Length = 1007
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Frame = +1
Query: 223 WIRMITGEPENTSGDMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMEN 390
W+R + + +G M F VL+DG LLC+LAN + PN I KKI ++ F C N
Sbjct: 46 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNN 105
Query: 391 INAF-LEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSL 510
IN F + + + F DL+ V+ L L
Sbjct: 106 INYFAMFCKTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFL 146
>DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein.
Length = 1007
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Frame = +1
Query: 223 WIRMITGEPENTSGDMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMEN 390
W+R + + +G M F VL+DG LLC+LAN + PN I KKI ++ F C N
Sbjct: 46 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNN 105
Query: 391 INAF-LEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSL 510
IN F + + + F DL+ V+ L L
Sbjct: 106 INYFAMFCKTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFL 146
>U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical
protein C14F11.2 protein.
Length = 638
Score = 41.9 bits (94), Expect = 4e-04
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +1
Query: 262 GDMDNFYEVLKDGTLLCKLANNIHPNMIKKINT--SSMA-FKCMENINAFLEAARQLGVP 432
GD+ +F L DG LCK N +HP I ++ SS+A + N++ FL+ R++GVP
Sbjct: 540 GDI-SFSLQLSDGQELCKFINKLHPESISLASSTDSSIATTRSKMNVDRFLQYCRKIGVP 598
Query: 433 AQETFQTVDLWERQNLNSV 489
+D+ ++N V
Sbjct: 599 ETTLCSQMDIISKRNPQKV 617
>U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical
protein T25F10.6a protein.
Length = 406
Score = 32.3 bits (70), Expect = 0.34
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +1
Query: 466 ERQNLNSVVICLQSLGRK-AGTYGKPSIGPKEAEKNVRNFSEEQLPAGQGVISLQYGSNX 642
E+ + ++ LQS K A G IG +VR +++ + QG I LQ G+N
Sbjct: 192 EKARASDGIVPLQSGTNKLASQAGMTGIGMPRIV-DVRRTNDQDRDS-QGFIHLQMGTNK 249
Query: 643 GANQSGI-NFGXTRH 684
ANQ+G+ FG RH
Sbjct: 250 FANQAGMTGFGMPRH 264
Score = 29.5 bits (63), Expect = 2.4
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +1
Query: 469 RQNLNSVVICLQSLGRKAGTY--GKPSIGPKEAEKNVRNFSEEQLPAGQGVISLQYGSNX 642
RQ +N QS+ RK Y GKPS ++E+L +G+I +Q GSN
Sbjct: 62 RQQVNFTPSIPQSVLRKQQNYSSGKPST----------IHTKEKLMRSEGIIPIQAGSNK 111
Query: 643 GANQSGI-NFGXTR 681
A+Q G+ FG R
Sbjct: 112 YASQKGMTGFGVPR 125
>U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical
protein T25F10.6b protein.
Length = 301
Score = 29.5 bits (63), Expect = 2.4
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +1
Query: 469 RQNLNSVVICLQSLGRKAGTY--GKPSIGPKEAEKNVRNFSEEQLPAGQGVISLQYGSNX 642
RQ +N QS+ RK Y GKPS ++E+L +G+I +Q GSN
Sbjct: 62 RQQVNFTPSIPQSVLRKQQNYSSGKPST----------IHTKEKLMRSEGIIPIQAGSNK 111
Query: 643 GANQSGI-NFGXTR 681
A+Q G+ FG R
Sbjct: 112 YASQKGMTGFGVPR 125
>U42844-6|AAB53814.1| 344|Caenorhabditis elegans Hypothetical
protein C08A9.6 protein.
Length = 344
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +3
Query: 252 EHLRGYGQLLRSA*RRHSSVQASQQHPPEHDQKDQHIVDGLQVHGEYQRFPRSRK 416
EHL + S + +S PP+ D QHI G QVH + ++P K
Sbjct: 244 EHLPDSSAKIYSTNIKSASCAPESTEPPKSDNSAQHI--GEQVHRLFAQYPERSK 296
>AC084153-10|AAK84591.1| 184|Caenorhabditis elegans Hypothetical
protein Y22D7AL.2 protein.
Length = 184
Score = 28.3 bits (60), Expect = 5.6
Identities = 24/66 (36%), Positives = 34/66 (51%)
Frame = -3
Query: 575 RTFFSASFGPIDGFP*VPAFLPSDCKQITTELRFCLSHRSTV*KVSCAGTPNCLAASRKA 396
RT + SF G P V A S + T LR +H++T +C GTPN AAS+
Sbjct: 88 RTHQTTSFTSNCGTPNVSA--ASKQPPLHTSLR---THQTTSFTSNC-GTPNVSAASKNN 141
Query: 395 LIFSMH 378
+F++H
Sbjct: 142 HLFTLH 147
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 244 EPENTSGDMDNFYEVLKDGTLLCKL 318
E ++SG +++ +E ++DG LLC L
Sbjct: 38 EEHSSSGRIEDLFEDIRDGVLLCHL 62
>AF024502-7|AAB70377.3| 352|Caenorhabditis elegans Hypothetical
protein M151.6 protein.
Length = 352
Score = 27.9 bits (59), Expect = 7.4
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = -3
Query: 221 SKDSWASSSLYLLLIFLWASAANPDL--VARLFAMSN**QFNK--LFK*ITDTVEGEVTV 54
+KDS SS + LL+ W +NP L + LF+ +N + + +F ITD + EV
Sbjct: 262 TKDSQFSSKDFNLLLKNWLRGSNPYLLNIVMLFSEANENRLVETIIFDGITDCIALEVQG 321
Query: 53 YRM*TGRRVNGTR 15
+ T + +GT+
Sbjct: 322 MKQFTVEKHDGTK 334
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 244 EPENTSGDMDNFYEVLKDGTLLCKL 318
E ++SG +++ +E ++DG LLC L
Sbjct: 38 EEHSSSGRIEDLFEDIRDGVLLCHL 62
>Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +3
Query: 282 RSA*RRHSSVQASQQHPPEHDQKDQHIVDGLQVHGEYQRFPRSRKTVGCTGAGNFSNCRP 461
R A R+ + + + PP + D GE+Q P SR T + + + P
Sbjct: 473 RPADRQSAVIPTLRGKPPAVPDSQRSGYDSSGNVGEHQSRPSSRTTSSSQRSSDAHSEEP 532
Query: 462 VGETESQLRR--DLLAVTG 512
+G S RR + +TG
Sbjct: 533 IGRNSSGARRAPEAFTITG 551
>Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +3
Query: 282 RSA*RRHSSVQASQQHPPEHDQKDQHIVDGLQVHGEYQRFPRSRKTVGCTGAGNFSNCRP 461
R A R+ + + + PP + D GE+Q P SR T + + + P
Sbjct: 473 RPADRQSAVIPTLRGKPPAVPDSQRSGYDSSGNVGEHQSRPSSRTTSSSQRSSDAHSEEP 532
Query: 462 VGETESQLRR--DLLAVTG 512
+G S RR + +TG
Sbjct: 533 IGRNSSGARRAPEAFTITG 551
>AF039041-2|AAP46270.1| 587|Caenorhabditis elegans Hypothetical
protein W03F8.10 protein.
Length = 587
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/80 (21%), Positives = 34/80 (42%)
Frame = +1
Query: 235 ITGEPENTSGDMDNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAA 414
+TG+ + + ++N E+L + +A N+ +K + + K ME I L+ A
Sbjct: 347 LTGKIKESLAKINNIDEILNETRGNKSIAANLESRAVKANKEAELLQKAMEEIREALQLA 406
Query: 415 RQLGVPAQETFQTVDLWERQ 474
Q + +D + Q
Sbjct: 407 DQAYNNVTSVLEEIDTMQVQ 426
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,418,593
Number of Sequences: 27780
Number of extensions: 391415
Number of successful extensions: 1136
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1128
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -