Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0504
(750 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 24 1.1
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 2.0
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 2.0
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 2.0
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 2.0
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 2.0
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 2.0
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 23 3.4
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 23 3.4
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 23 3.4
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 23 3.4
AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein p... 23 3.4
AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein p... 23 3.4
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 21 8.0
AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein. 21 8.0
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 21 8.0
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 21 8.0
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.2 bits (50), Expect = 1.1
Identities = 25/102 (24%), Positives = 43/102 (42%)
Frame = +1
Query: 304 PAKAAGTTQAKPLVAKVVVQAGHSNTDTSNQPAVLTKLLPSSNAGARYVMQQKTVPISIG 483
P K A +T ++ L + + S+T+ + +K SSN Y ++ + +G
Sbjct: 154 PGKPATSTTSQNLSSPASSTSSTSSTEKAGTNNNNSKSSQSSNPPQIYPWMKR---VHLG 210
Query: 484 NKVLLSSPTKQGVKKQQIIAVKSSSTKXFNEKSFHIGKFLTR 609
S+ G K+Q + T EK FH ++LTR
Sbjct: 211 Q----STVNANGETKRQRTSYTRYQTLEL-EKEFHFNRYLTR 247
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.4 bits (48), Expect = 2.0
Identities = 25/102 (24%), Positives = 43/102 (42%)
Frame = +1
Query: 304 PAKAAGTTQAKPLVAKVVVQAGHSNTDTSNQPAVLTKLLPSSNAGARYVMQQKTVPISIG 483
P K A +T ++ L + + S+T+ + +K SSN Y ++ + +G
Sbjct: 154 PGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKR---VHLG 210
Query: 484 NKVLLSSPTKQGVKKQQIIAVKSSSTKXFNEKSFHIGKFLTR 609
S+ G K+Q + T EK FH ++LTR
Sbjct: 211 Q----STVNANGETKRQRTSYTRYQTLEL-EKEFHFNRYLTR 247
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.4 bits (48), Expect = 2.0
Identities = 25/102 (24%), Positives = 43/102 (42%)
Frame = +1
Query: 304 PAKAAGTTQAKPLVAKVVVQAGHSNTDTSNQPAVLTKLLPSSNAGARYVMQQKTVPISIG 483
P K A +T ++ L + + S+T+ + +K SSN Y ++ + +G
Sbjct: 154 PGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKR---VHLG 210
Query: 484 NKVLLSSPTKQGVKKQQIIAVKSSSTKXFNEKSFHIGKFLTR 609
S+ G K+Q + T EK FH ++LTR
Sbjct: 211 Q----STVNANGETKRQRTSYTRYQTLEL-EKEFHFNRYLTR 247
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 23.4 bits (48), Expect = 2.0
Identities = 25/102 (24%), Positives = 43/102 (42%)
Frame = +1
Query: 304 PAKAAGTTQAKPLVAKVVVQAGHSNTDTSNQPAVLTKLLPSSNAGARYVMQQKTVPISIG 483
P K A +T ++ L + + S+T+ + +K SSN Y ++ + +G
Sbjct: 154 PGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKR---VHLG 210
Query: 484 NKVLLSSPTKQGVKKQQIIAVKSSSTKXFNEKSFHIGKFLTR 609
S+ G K+Q + T EK FH ++LTR
Sbjct: 211 Q----STVNANGETKRQRTSYTRYQTLEL-EKEFHFNRYLTR 247
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 23.4 bits (48), Expect = 2.0
Identities = 25/102 (24%), Positives = 43/102 (42%)
Frame = +1
Query: 304 PAKAAGTTQAKPLVAKVVVQAGHSNTDTSNQPAVLTKLLPSSNAGARYVMQQKTVPISIG 483
P K A +T ++ L + + S+T+ + +K SSN Y ++ + +G
Sbjct: 110 PGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKR---VHLG 166
Query: 484 NKVLLSSPTKQGVKKQQIIAVKSSSTKXFNEKSFHIGKFLTR 609
S+ G K+Q + T EK FH ++LTR
Sbjct: 167 Q----STVNANGETKRQRTSYTRYQTLEL-EKEFHFNRYLTR 203
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 23.4 bits (48), Expect = 2.0
Identities = 25/102 (24%), Positives = 43/102 (42%)
Frame = +1
Query: 304 PAKAAGTTQAKPLVAKVVVQAGHSNTDTSNQPAVLTKLLPSSNAGARYVMQQKTVPISIG 483
P K A +T ++ L + + S+T+ + +K SSN Y ++ + +G
Sbjct: 154 PGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKR---VHLG 210
Query: 484 NKVLLSSPTKQGVKKQQIIAVKSSSTKXFNEKSFHIGKFLTR 609
S+ G K+Q + T EK FH ++LTR
Sbjct: 211 Q----STVNANGETKRQRTSYTRYQTLEL-EKEFHFNRYLTR 247
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 23.4 bits (48), Expect = 2.0
Identities = 25/102 (24%), Positives = 43/102 (42%)
Frame = +1
Query: 304 PAKAAGTTQAKPLVAKVVVQAGHSNTDTSNQPAVLTKLLPSSNAGARYVMQQKTVPISIG 483
P K A +T ++ L + + S+T+ + +K SSN Y ++ + +G
Sbjct: 154 PGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKR---VHLG 210
Query: 484 NKVLLSSPTKQGVKKQQIIAVKSSSTKXFNEKSFHIGKFLTR 609
S+ G K+Q + T EK FH ++LTR
Sbjct: 211 Q----STVNANGETKRQRTSYTRYQTLEL-EKEFHFNRYLTR 247
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1
Query: 574 EKSFHIGKFLTR 609
EK FH K+LTR
Sbjct: 199 EKEFHFNKYLTR 210
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1
Query: 574 EKSFHIGKFLTR 609
EK FH K+LTR
Sbjct: 269 EKEFHFNKYLTR 280
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1
Query: 574 EKSFHIGKFLTR 609
EK FH K+LTR
Sbjct: 199 EKEFHFNKYLTR 210
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1
Query: 574 EKSFHIGKFLTR 609
EK FH K+LTR
Sbjct: 199 EKEFHFNKYLTR 210
>AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1
Query: 574 EKSFHIGKFLTR 609
EK FH K+LTR
Sbjct: 58 EKEFHFNKYLTR 69
>AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1
Query: 574 EKSFHIGKFLTR 609
EK FH K+LTR
Sbjct: 58 EKEFHFNKYLTR 69
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.4 bits (43), Expect = 8.0
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 574 EKSFHIGKFLTR 609
EK FH ++LTR
Sbjct: 258 EKEFHFNRYLTR 269
>AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein.
Length = 301
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 126 KSLSSRCTSKLKRQCCTSSNW 188
K LS + L R C T+S+W
Sbjct: 17 KLLSCKDFDTLYRDCTTASSW 37
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 21.4 bits (43), Expect = 8.0
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 574 EKSFHIGKFLTR 609
EK FH ++LTR
Sbjct: 24 EKEFHFNRYLTR 35
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 21.4 bits (43), Expect = 8.0
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 574 EKSFHIGKFLTR 609
EK FH ++LTR
Sbjct: 260 EKEFHFNRYLTR 271
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,294
Number of Sequences: 336
Number of extensions: 3141
Number of successful extensions: 26
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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