Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0504
         (750 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC113529-1|AAI13530.1|  123|Homo sapiens hypothetical protein FL...    30   7.7  
BC113527-1|AAI13528.1|  123|Homo sapiens hypothetical protein FL...    30   7.7  
BC029041-1|AAH29041.1|  668|Homo sapiens ZBTB20 protein protein.       30   7.7  
AK093527-1|BAC04193.1|  123|Homo sapiens protein ( Homo sapiens ...    30   7.7  
AE006464-2|AAK61234.1|  871|Homo sapiens unknown protein.              30   7.7  

>BC113529-1|AAI13530.1|  123|Homo sapiens hypothetical protein
           FLJ36208 protein.
          Length = 123

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +1

Query: 139 AGVQANSKGNAVLAQIGKQLVMVPAEGAQKIKLVSAGSGATLQYVRANSDQAQLTPAK 312
           AG+ +NS+GN ++A   ++ V +       I LVS G G  L    A   Q  +  AK
Sbjct: 52  AGICSNSEGNVIVADEQRRQVTLFPRAGPPICLVSEGLGQPLGVACAPQGQLLVADAK 109


>BC113527-1|AAI13528.1|  123|Homo sapiens hypothetical protein
           FLJ36208 protein.
          Length = 123

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +1

Query: 139 AGVQANSKGNAVLAQIGKQLVMVPAEGAQKIKLVSAGSGATLQYVRANSDQAQLTPAK 312
           AG+ +NS+GN ++A   ++ V +       I LVS G G  L    A   Q  +  AK
Sbjct: 52  AGICSNSEGNVIVADEQRRQVTLFPRAGPPICLVSEGLGQPLGVACAPQGQLLVADAK 109


>BC029041-1|AAH29041.1|  668|Homo sapiens ZBTB20 protein protein.
          Length = 668

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 19/69 (27%), Positives = 35/69 (50%)
 Frame = +1

Query: 277 ANSDQAQLTPAKAAGTTQAKPLVAKVVVQAGHSNTDTSNQPAVLTKLLPSSNAGARYVMQ 456
           A   QA+ T  + A    A+       ++ G S+ + SN+  + + ++  SN+  + V+Q
Sbjct: 326 ARDSQAEPTQPEQAAEAPAEGGPQTNQLETGASSPERSNEVEMDSTVITVSNSSDKSVLQ 385

Query: 457 QKTVPISIG 483
           Q +V  SIG
Sbjct: 386 QPSVNTSIG 394


>AK093527-1|BAC04193.1|  123|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36208 fis, clone THYMU1000428, weakly similar to
           ZINC-FINGER PROTEIN HT2A. ).
          Length = 123

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +1

Query: 139 AGVQANSKGNAVLAQIGKQLVMVPAEGAQKIKLVSAGSGATLQYVRANSDQAQLTPAK 312
           AG+ +NS+GN ++A   ++ V +       I LVS G G  L    A   Q  +  AK
Sbjct: 52  AGICSNSEGNVIVADEQRRQVTLFPRAGPPICLVSEGLGQPLGVACAPQGQLLVADAK 109


>AE006464-2|AAK61234.1|  871|Homo sapiens unknown protein.
          Length = 871

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +1

Query: 139 AGVQANSKGNAVLAQIGKQLVMVPAEGAQKIKLVSAGSGATLQYVRANSDQAQLTPAK 312
           AG+ +NS+GN ++A   ++ V +       I LVS G G  L    A   Q  +  AK
Sbjct: 800 AGICSNSEGNVIVADEQRRQVTLFPRAGPPICLVSEGLGQPLGVACAPQGQLLVADAK 857


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,764,026
Number of Sequences: 237096
Number of extensions: 1891558
Number of successful extensions: 4985
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4977
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)