Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0501
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17) 40 0.002
SB_47132| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16) 39 0.005
SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29) 38 0.007
SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14) 38 0.009
SB_25563| Best HMM Match : HEAT (HMM E-Value=2.5e-20) 38 0.011
SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011
SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18) 37 0.020
SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09) 36 0.035
SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15) 36 0.046
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_27164| Best HMM Match : CBM_14 (HMM E-Value=1.1e-05) 32 0.57
SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 31 0.76
SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_44060| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 31 1.00
SB_42362| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 29 3.0
SB_50548| Best HMM Match : Tsg (HMM E-Value=2.2) 29 4.0
SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_49656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_41624| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_38736| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_49244| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_42083| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_38518| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_26620| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15) 28 9.3
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 59.3 bits (137), Expect = 3e-09
Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 14/133 (10%)
Frame = +2
Query: 248 EDGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDCSQRPKLQ-- 421
++G +ADA C+ + C G I CP + Y P + +C+ +DC QRP +
Sbjct: 522 QNGKYADANNCNGFVMCSNGYIYYMDCPSNL---RYDPAKGRCEWADTVDCGQRPTISPH 578
Query: 422 -----------TPQPSLHC-IRQNGYFSHEDPKECGKFYFCVDGKFNMITCPDGLVYNDK 565
TP S C ++NG + DP C F C +G CP L ++ K
Sbjct: 579 PPKPTTMPPQPTPPKSPFCEEKKNG--DYADPSNCNGFITCSNGYAYKRDCPFNLKFDTK 636
Query: 566 TGICTWPDEAKKK 604
C WP++ K
Sbjct: 637 KLECEWPNKVNCK 649
Score = 58.4 bits (135), Expect = 6e-09
Identities = 37/123 (30%), Positives = 53/123 (43%), Gaps = 10/123 (8%)
Frame = +2
Query: 251 DGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDCSQR----PKL 418
DG + D + C+ + C CP+ + FN P + CD P N+ C PK+
Sbjct: 448 DGDYQDPDACEGFISCSNHITYHMPCPENLRFN---PTTKHCDNPENVQCGPTRPPTPKV 504
Query: 419 Q--TPQP---SLHCI-RQNGYFSHEDPKECGKFYFCVDGKFNMITCPDGLVYNDKTGICT 580
T P S C+ +QNG ++ D C F C +G + CP L Y+ G C
Sbjct: 505 PPTTKAPFTKSPFCVGKQNGKYA--DANNCNGFVMCSNGYIYYMDCPSNLRYDPAKGRCE 562
Query: 581 WPD 589
W D
Sbjct: 563 WAD 565
Score = 55.2 bits (127), Expect = 5e-08
Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 7/129 (5%)
Frame = +2
Query: 248 EDGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDCSQRP----- 412
++G +AD C+ + C G ++ CP + F+ ++ +C+ P ++C RP
Sbjct: 601 KNGDYADPSNCNGFITCSNGYAYKRDCPFNLKFDT---KKLECEWPNKVNCKSRPTTVPY 657
Query: 413 --KLQTPQPSLHCIRQNGYFSHEDPKECGKFYFCVDGKFNMITCPDGLVYNDKTGICTWP 586
K P + ++NG + DP C + C G C GL +N T C P
Sbjct: 658 VTKPTPPSGNSEFCKKNGNGRYRDPHNCLGYIVCRGGNIYFRNCRRGLRFNGVTKRCDLP 717
Query: 587 DEAKKKGCG 613
K G G
Sbjct: 718 RNVKCAGAG 726
Score = 48.0 bits (109), Expect = 8e-06
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Frame = +2
Query: 233 TNLCPE--DGYFADAEQCDKYYECRGG-DIIEKLCPDGMVFNDYSPQEEKCDLPFNLDCS 403
+N C E DG +AD+ C+ Y C G I + CP G+ FN+ CD P N+
Sbjct: 313 SNFCTERQDGNYADSSNCNLYITCSNGFTIANRHCPTGLAFNEAIGM---CDYPSNV--- 366
Query: 404 QRPKLQTPQPSLHCIRQNGYFSHEDPKECGKFYFCVDGKFNMITCP 541
P S C + +++D C F C +G +TCP
Sbjct: 367 --PGCSGSSGSGFC-HEKSDGNYKDSGNCHGFIMCSNGHTYHMTCP 409
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 1/117 (0%)
Frame = +2
Query: 251 DGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDCSQRPKLQ-TP 427
DG + D+ C + C G CP ++ P +++C+ + DCS R T
Sbjct: 383 DGNYKDSGNCHGFIMCSNGHTYHMTCPGQ---TNFDPAKKRCE---DYDCSGRDVAYLTD 436
Query: 428 QPSLHCIRQNGYFSHEDPKECGKFYFCVDGKFNMITCPDGLVYNDKTGICTWPDEAK 598
Q + ++DP C F C + + CP+ L +N T C P+ +
Sbjct: 437 QNDGGFCAERSDGDYQDPDACEGFISCSNHITYHMPCPENLRFNPTTKHCDNPENVQ 493
Score = 35.1 bits (77), Expect = 0.061
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +2
Query: 404 QRPKLQTPQPSLHCIRQNGYFSHEDPKECGKFYFCVDGKFNMIT--CPDGLVYNDKTGIC 577
Q P L + RQ+G ++ D C + C +G F + CP GL +N+ G+C
Sbjct: 304 QLPNLPLVDSNFCTERQDGNYA--DSSNCNLYITCSNG-FTIANRHCPTGLAFNEAIGMC 360
Query: 578 TWPDEAKKKGCGAA 619
+P GC +
Sbjct: 361 DYPSNV--PGCSGS 372
>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 49.6 bits (113), Expect = 3e-06
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +2
Query: 251 DGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDC 400
DG +AD + C YY+C+ G +K CPDG+ FN + CD P ++C
Sbjct: 233 DGTYADPKDCSAYYQCKKGRSFKKFCPDGLKFNALI---KSCDEPSKVNC 279
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +2
Query: 467 SHEDPKECGKFYFCVDGKFNMITCPDGLVYNDKTGICTWPDEAKKKGC 610
++ DPK+C +Y C G+ CPDGL +N C DE K C
Sbjct: 235 TYADPKDCSAYYQCKKGRSFKKFCPDGLKFNALIKSC---DEPSKVNC 279
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 45.2 bits (102), Expect = 6e-05
Identities = 44/159 (27%), Positives = 65/159 (40%), Gaps = 41/159 (25%)
Frame = +2
Query: 233 TNLCPE--DGYFADAEQCDKYYECRG-GDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDCS 403
T C + +GY+AD C ++Y+C C G+ +S + CD P N+DC
Sbjct: 780 TTFCKDKPNGYYADPRDCSRFYQCDAFHRAFLHRCSPGL---KWSITKTTCDWPRNVDCD 836
Query: 404 QR--------PKLQTPQPS--LHCIRQN---------GY-----------FSHE------ 475
++ P TP+P+ LHC N GY F +
Sbjct: 837 RKTPTPPSPTPPTTTPKPACDLHCQTLNPDGSCTVAPGYEVVNGMCVDTTFCKDKPNGHY 896
Query: 476 -DPKECGKFYFC-VDGKFNMITCPDGLVYNDKTGICTWP 586
DP++C KFY C + + CP GL ++ K C WP
Sbjct: 897 ADPRDCSKFYQCDAFHRAFLHRCPAGLKWSVKKTACDWP 935
Score = 44.0 bits (99), Expect = 1e-04
Identities = 41/154 (26%), Positives = 64/154 (41%), Gaps = 36/154 (23%)
Frame = +2
Query: 233 TNLCPE--DGYFADAEQCDKYYECRG-GDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDC- 400
T C + +G++AD C ++Y+C CP G+ +S ++ CD P +DC
Sbjct: 1135 TTFCKDKPNGHYADPRDCSRFYQCDAFHKTFLHRCPAGL---KWSVKKTACDWPRYVDCD 1191
Query: 401 --SQRPKLQTPQP--SLHC--IRQNG------------------YFSHE-------DPKE 487
+ P T +P LHC + +G YF E DP++
Sbjct: 1192 RTTSTPPTPTTKPECDLHCQTLSPDGSCTVAPGYAVVNGMCVDTYFCKEKPNGHYADPRD 1251
Query: 488 CGKFYFC-VDGKFNMITCPDGLVYNDKTGICTWP 586
C +FY C + + CP GL ++ K C WP
Sbjct: 1252 CSRFYQCDAFHRAFLHRCPAGLKWSVKKTACDWP 1285
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = +2
Query: 233 TNLCPE--DGYFADAEQCDKYYECRGG-DIIEKLCPDGMVFNDYSPQEEKCDLPFNLDCS 403
T C + G++AD C ++Y+C CPDG+ +S ++ CDLP +DC
Sbjct: 1340 TTFCKDRPHGHYADPRDCSRFYQCDASHKTFLHRCPDGL---KWSVKKTACDLPLYVDCD 1396
Query: 404 QR-PKLQTPQPS 436
+ P + T PS
Sbjct: 1397 RTIPTVATGLPS 1408
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +2
Query: 254 GYFADAEQCDKYYECRG-GDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDCSQ 406
GY+AD + C ++Y C G + + CP G++ +S ++ CD P +DCS+
Sbjct: 574 GYYADPKDCAQFYFCYGSAESLLSRCPRGLL---WSVVKKTCDYPHLVDCSR 622
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +2
Query: 449 RQNGYFSHEDPKECGKFYFCVDGKFNMIT-CPDGLVYNDKTGICTWP 586
+ GY++ DPK+C +FYFC ++++ CP GL+++ C +P
Sbjct: 571 KPRGYYA--DPKDCAQFYFCYGSAESLLSRCPRGLLWSVVKKTCDYP 615
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Frame = +2
Query: 260 FADAEQCDKYYECRGGDIIE-KLCPDGMVFNDYSPQEEKCDLPFNLDCSQRP-KLQTPQP 433
FAD C KYY C G D + + CP G ++N + + ++ DL D P P
Sbjct: 75 FADPRDCFKYYHCDGYDDVRWRSCPTGQLWNHVNKKCDRADLVI-CDRDATPGTFMLPDN 133
Query: 434 SLHCIRQNGYFSHEDPKECGKFYFCVD 514
++ N F+ D K F ++
Sbjct: 134 KIYNSLDNKKFNSPDNKSFNSLNFHIN 160
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +2
Query: 233 TNLCPE--DGYFADAEQCDKYYECRG-GDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDCS 403
T C + +G++AD C K+Y+C CP G+ +S ++ CD P +DC
Sbjct: 885 TTFCKDKPNGHYADPRDCSKFYQCDAFHRAFLHRCPAGL---KWSVKKTACDWPRYVDC- 940
Query: 404 QRPKLQTPQPSLH 442
R P P+ H
Sbjct: 941 DRTTSTPPTPTTH 953
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 449 RQNGYFSHEDPKECGKFYFC-VDGKFNMITCPDGLVYNDKTGICTWP 586
R +G+++ DP++C +FY C K + CPDGL ++ K C P
Sbjct: 1346 RPHGHYA--DPRDCSRFYQCDASHKTFLHRCPDGLKWSVKKTACDLP 1390
Score = 35.5 bits (78), Expect = 0.046
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 449 RQNGYFSHEDPKECGKFYFC-VDGKFNMITCPDGLVYNDKTGICTWP 586
+ NG+++ DP +C +FY C + + CP GL ++ K C WP
Sbjct: 996 KPNGHYA--DPMDCSRFYQCDAFHRAFLHRCPAGLKWSVKKTTCDWP 1040
Score = 35.1 bits (77), Expect = 0.061
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +2
Query: 233 TNLCPE--DGYFADAEQCDKYYECRG-GDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDCS 403
T C + +G++AD C ++Y+C CP G+ +S ++ CD P +DC
Sbjct: 990 TTFCKDKPNGHYADPMDCSRFYQCDAFHRAFLHRCPAGL---KWSVKKTTCDWPRYVDCD 1046
Query: 404 QRP 412
+ P
Sbjct: 1047 RTP 1049
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 470 HEDPKECGKFYFC-VDGKFNMITCPDGLVYNDKTGICTWP 586
+ DP+ C + Y C + + + +CP GL +N + C P
Sbjct: 1462 YHDPRNCSRLYQCDIFHRAFLKSCPHGLKWNIEKNACDHP 1501
>SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17)
Length = 225
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2
Query: 251 DGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDC 400
DG + + C Y C G E CP G+ +ND +++ CD PFN C
Sbjct: 91 DGNYPHPDFCKMYIACSNGIAYEMPCPAGLNWND---EKKYCDWPFNAPC 137
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +2
Query: 449 RQNGYFSHEDPKECGKFYFCVDGKFNMITCPDGLVYNDKTGICTWPDEAKKKG 607
R +G + H P C + C +G + CP GL +ND+ C WP A +G
Sbjct: 89 RADGNYPH--PDFCKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWPFNAPCEG 139
>SB_47132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/111 (21%), Positives = 36/111 (32%)
Frame = +2
Query: 254 GYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDCSQRPKLQTPQP 433
G +AD +C + C + + CP G + P C P DC
Sbjct: 116 GNYADTARCAGFISCASNGMTRQACPSGTQWQTTGPGVGICTCPSLSDCGSADG------ 169
Query: 434 SLHCIRQNGYFSHEDPKECGKFYFCVDGKFNMITCPDGLVYNDKTGICTWP 586
+ R + D C + CV G + CP G + + C P
Sbjct: 170 --NFCRGKADGDYPDTSRCDGYVSCVSGYIYYMPCPAGTQWKNAEDACVDP 218
Score = 32.7 bits (71), Expect = 0.33
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = +2
Query: 251 DGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDC 400
DG + D +CD Y C G I CP G + E+ C P DC
Sbjct: 177 DGDYPDTSRCDGYVSCVSGYIYYMPCPAG---TQWKNAEDACVDPSASDC 223
>SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16)
Length = 518
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 452 QNGYFSHEDPKECGKFYFCVDGKFNMITCPDGLVYNDKTGICTWPDEAK 598
+NG + + + C F C G + TCP GL++N +C W E K
Sbjct: 460 RNGDGIYAEKENCYGFVLCGGGIAHKKTCPPGLIFNTDLMVCDWSHEVK 508
Score = 37.1 bits (82), Expect = 0.015
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 251 DGYFADAEQCDKYYECRGGDIIEKLCPDGMVFN 349
DG +A+ E C + C GG +K CP G++FN
Sbjct: 463 DGIYAEKENCYGFVLCGGGIAHKKTCPPGLIFN 495
>SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)
Length = 339
Score = 38.3 bits (85), Expect = 0.007
Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 26/137 (18%)
Frame = +2
Query: 254 GYFADAEQCDKYYECRG--------------GDIIEKLCPDGM-VFNDYSPQEEKCDLPF 388
G + D + C KYY+C ++ +C V D P + +CDL
Sbjct: 28 GCYVDLKDCSKYYQCDDFHKTHHRTCSEQLKWSAVKNICDHAADVDCDRKPLKPRCDLHC 87
Query: 389 N---LD--CSQRPKLQTPQ----PSLHCIR-QNGYFSHEDPKECGKFYFC-VDGKFNMIT 535
LD C+ P + + + +C+ NG++ DP+ C +FY C K + +
Sbjct: 88 QEKGLDGSCTVMPNWRIEKGMCVDNNYCLLLPNGHY--HDPRNCSRFYQCDAFHKAFLHS 145
Query: 536 CPDGLVYNDKTGICTWP 586
CP GL ++ C WP
Sbjct: 146 CPSGLKWSVTKTTCDWP 162
>SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14)
Length = 480
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +2
Query: 230 ITNLCPE--DGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCD 379
++N C + DG +A +CD Y C G E CP G+ +ND + ++CD
Sbjct: 332 VSNFCQDKADGNYAHPSKCDMYITCSNGIAHEMPCPAGLNWNDVT---KECD 380
Score = 32.3 bits (70), Expect = 0.43
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 449 RQNGYFSHEDPKECGKFYFCVDGKFNMITCPDGLVYNDKTGIC 577
+ +G ++H P +C + C +G + + CP GL +ND T C
Sbjct: 339 KADGNYAH--PSKCDMYITCSNGIAHEMPCPAGLNWNDVTKEC 379
>SB_25563| Best HMM Match : HEAT (HMM E-Value=2.5e-20)
Length = 1803
Score = 37.5 bits (83), Expect = 0.011
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Frame = +2
Query: 260 FADAEQCDKYYECRGGDIIE-KLCPDGMVFNDYSPQEEKCDLPFNLDCSQRPKLQTPQPS 436
FAD + C KYY C G D + CP G ++N + +KCD + C R P
Sbjct: 1499 FADPKDCSKYYHCDGYDDGRLRSCPTGQLWNHVN---KKCDRADLVICDPR-CYSCPDNK 1554
Query: 437 LHCIRQNGYFSHEDPKECGKFYFCVD 514
++ N F+ D K F ++
Sbjct: 1555 IYNSLDNKKFNSPDNKSFNSLNFHIN 1580
>SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 470 HEDPKE-CGKFYFCVDGKFNMITCPDGLVYNDKTGICTWP 586
+ DP + C F C + + CP GL+YN+KT C WP
Sbjct: 84 YRDPYDACRGFIHCHNYNASYKPCPGGLLYNEKTKQCDWP 123
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 251 DGYFADA-EQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDC 400
DG + D + C + C + K CP G+++N+ + Q CD P N+DC
Sbjct: 81 DGEYRDPYDACRGFIHCHNYNASYKPCPGGLLYNEKTKQ---CDWPRNVDC 128
>SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18)
Length = 123
Score = 36.7 bits (81), Expect = 0.020
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +2
Query: 251 DGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDCSQR 409
+G +A E C Y C E+ CP G+ +ND ++ CD P N C ++
Sbjct: 67 NGDYAHPENCKMYITCSNKITYERQCPAGLNWND---AKKWCDWPKNAPCEEK 116
Score = 34.7 bits (76), Expect = 0.081
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +2
Query: 449 RQNGYFSHEDPKECGKFYFCVDGKFNMITCPDGLVYNDKTGICTWPDEA 595
R NG ++H P+ C + C + CP GL +ND C WP A
Sbjct: 65 RANGDYAH--PENCKMYITCSNKITYERQCPAGLNWNDAKKWCDWPKNA 111
>SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09)
Length = 98
Score = 35.9 bits (79), Expect = 0.035
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +2
Query: 470 HEDPKECGKFYFCVDGKFNMITCPDGLVYNDKTGICTWPDEAKKK 604
+ D K KF C +G C GLV+N K IC PD+ K
Sbjct: 15 YADEKNPSKFVICYNGVREERECAKGLVFNPKEKICEQPDQRYTK 59
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +2
Query: 233 TNLCP--EDGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLP 385
+N C G +AD + K+ C G E+ C G+VFN P+E+ C+ P
Sbjct: 4 SNFCKVKTSGVYADEKNPSKFVICYNGVREERECAKGLVFN---PKEKICEQP 53
>SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15)
Length = 220
Score = 35.5 bits (78), Expect = 0.046
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 455 NGYFSHEDPKECGKFYFC-VDGKFNMITCPDGLVYNDKTGICTWP 586
NG++ DP+ C +FY C K + +CP GL ++ C WP
Sbjct: 27 NGHY--HDPRNCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWP 69
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 31.9 bits (69), Expect = 0.57
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 458 GYFSHEDPKECGKFYFCVDGKFNMITCPDG-LVYNDKTGI 574
GY+ D K+C +C G I CP+G Y++ TG+
Sbjct: 2751 GYYCDPDAKKCPSHNYCPAGVTVPILCPNGTFTYDNMTGL 2790
Score = 30.7 bits (66), Expect = 1.3
Identities = 29/112 (25%), Positives = 42/112 (37%), Gaps = 5/112 (4%)
Frame = +2
Query: 245 PEDGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEK-C-DLPFNLDCSQRPKL 418
P DG D +Y C G + +LCP G N+ + C C + K
Sbjct: 185 PTDGITGDICPPGRY--CEQGTKVPELCPQGTFSNNTGNKNVSYCFACTGGYYCQGQGKT 242
Query: 419 QTP---QPSLHCIRQNGYFSHEDPKECGKFYFCVDGKFNMITCPDGLVYNDK 565
+ P +C G S+ P C K ++C G + CP G Y D+
Sbjct: 243 EPTGKCDPGFYC---PGGDSNPTPYPCTKGHYCPKGTSAPVKCPSG-SYQDE 290
Score = 29.5 bits (63), Expect = 3.0
Identities = 28/113 (24%), Positives = 41/113 (36%), Gaps = 11/113 (9%)
Frame = +2
Query: 242 CPEDGYFADAEQCDKYYECRGGDIIEK----LCPDGMVFNDYSPQEEKCDLPFNLDCSQR 409
C +G CDK Y C G ++ +C G + SP + C D QR
Sbjct: 769 CESEGLDTPTGPCDKGYYCPNGQSSKRPSAYVCTPGHYCTEGSPVKRPCASGSYQDEYQR 828
Query: 410 PKLQTPQPSLHC---IRQNGYFSH--EDPKECGKFYFCVDGKFNMI--TCPDG 547
+T +C I + H + P C K ++C +G CP G
Sbjct: 829 WDCKTCPEGYYCDATILNATHCVHGVQLPTPCVKGHYCTNGTTTATEHPCPAG 881
>SB_27164| Best HMM Match : CBM_14 (HMM E-Value=1.1e-05)
Length = 85
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 254 GYFADAEQCDKYYECRG-GDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDC 400
G++ D C K+Y+C G ++C D +S + CD N+DC
Sbjct: 35 GHYTDPADCAKFYQCDGFHRTFHRMCSD---VPKWSVMKSTCDHAKNVDC 81
>SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 155
Score = 31.5 bits (68), Expect = 0.76
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +2
Query: 254 GYFADAEQCDKYYECRG-GDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDCSQRP-KLQTP 427
G + D + C KYY+C + C D + +S + CD ++DC ++P K + P
Sbjct: 77 GCYVDLKDCSKYYQCDDFHKTHHRTCSDQL---KWSAVKNICDHAADVDCDRKPLKPRVP 133
Query: 428 QPS 436
S
Sbjct: 134 DRS 136
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 476 DPKECGKFYFCVD-GKFNMITCPDGLVYNDKTGIC 577
D K+C K+Y C D K + TC D L ++ IC
Sbjct: 81 DLKDCSKYYQCDDFHKTHHRTCSDQLKWSAVKNIC 115
>SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1169
Score = 31.5 bits (68), Expect = 0.76
Identities = 24/112 (21%), Positives = 41/112 (36%), Gaps = 6/112 (5%)
Frame = +2
Query: 254 GYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSP------QEEKCDLPFNLDCSQRPK 415
GY D + C + C I+ C G+ CD + +
Sbjct: 798 GYQNDCKPCTAGHYCLNATIVPSPCGKGLFTKPGQSVCQVCLPGRYCDSDTTTETNMNTT 857
Query: 416 LQTPQPSLHCIRQNGYFSHEDPKECGKFYFCVDGKFNMITCPDGLVYNDKTG 571
++ P+ L+C + G + + C K ++C +G + CP G YN G
Sbjct: 858 MRCPE-GLYC--KGGLTNVSEATSCSKAHYCPEGIEAEVPCPVG-TYNPSFG 905
>SB_44060| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 64
Score = 31.1 bits (67), Expect = 1.00
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 254 GYFADAEQCDKYYECRG-GDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDCSQRP 412
G + D + C KYY+C + C D + +S + CD ++DC ++P
Sbjct: 10 GCYVDLKDCSKYYQCDDFHKTHHRTCSDQL---KWSAVKNICDHAADVDCDRKP 60
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 476 DPKECGKFYFCVD-GKFNMITCPDGLVYNDKTGIC 577
D K+C K+Y C D K + TC D L ++ IC
Sbjct: 14 DLKDCSKYYQCDDFHKTHHRTCSDQLKWSAVKNIC 48
>SB_42362| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 30.3 bits (65), Expect = 1.7
Identities = 25/70 (35%), Positives = 39/70 (55%)
Frame = -3
Query: 454 LTNTVEGRLRCLKLGSLRAVQVER*ITFLFLWTVVVEHHTVWAKFLNYITTPAFIIFVTL 275
LT TV RC+ +L AV +ER ++ LF WT HTV+ N +T A +I+++
Sbjct: 105 LTLTVNWLFRCVSYLTLIAVCIERYVS-LF-WTY---KHTVYVT-KNVTSTIAALIWLSS 158
Query: 274 FGVSKVSIFR 245
+ +S+FR
Sbjct: 159 LVIVPLSVFR 168
>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
Length = 3810
Score = 29.5 bits (63), Expect = 3.0
Identities = 30/120 (25%), Positives = 45/120 (37%), Gaps = 10/120 (8%)
Frame = +2
Query: 230 ITNLCPEDGYFADAEQCD--KYYECRGGDIIEKL--CPDGMVFNDYSPQ--EEKCDLPFN 391
+ + CPE FA C + G + E CP G ++ + +KCD +
Sbjct: 622 VGHYCPEGTTFAQEFPCPVGTFSNTEGLKVKESCSPCPGGFYCDELAQTMYTKKCDSGYY 681
Query: 392 LDCSQRPKLQTPQ----PSLHCIRQNGYFSHEDPKECGKFYFCVDGKFNMITCPDGLVYN 559
C + TP+ S CI G F++ D C ++C G CP G N
Sbjct: 682 --CRSGATVATPEIAAENSTSCIP--GTFNYTDAGPCPAGFYCPLGTAEPEKCPPGTFSN 737
>SB_50548| Best HMM Match : Tsg (HMM E-Value=2.2)
Length = 110
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 10/66 (15%)
Frame = +2
Query: 479 PKECGKFYFCV---DGKFNMI--TCPDGLV-----YNDKTGICTWPDEAKKKGCGAAEVF 628
P C + Y+C G N + DG+V Y+D C W + + + CG V+
Sbjct: 32 PTSCTRRYYCGTYGSGWLNGAHPSVADGVVTRTVCYSDSNNCCKWSNNIRVRNCGEFYVY 91
Query: 629 QFECPA 646
+ P+
Sbjct: 92 ELSAPS 97
>SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2641
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +2
Query: 242 CP-EDGYFADAEQCDKYYECRGGDIIEKLCPDGMVFND 352
CP DG+F D +Y C G CPD M + +
Sbjct: 2179 CPTSDGFFPDPASNGRYIHCSGNSPEIMSCPDKMTWQN 2216
>SB_49656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 292
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -3
Query: 682 YRGWVRPKVSFNSRTFELEYLCSATSLLFSFIRP 581
YR W+R R L+ L SAT + F+FI P
Sbjct: 114 YRTWLRSSSMHEPRDPPLKALTSATGVAFTFITP 147
>SB_41624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 917
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 440 HCIRQNGYFSHEDPKECGKFYFCVDGKFNMITCPDGLVYNDKT 568
+C +G F+ DP + CV G + C DGLV+ K+
Sbjct: 171 YCKSPDGMFA--DPYNEAGYIHCVSGVGKRVNCGDGLVWEKKS 211
>SB_38736| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -3
Query: 655 SFNSRTFELEYLCSATSLLFSFIRPSADAGLVVVDQAIRTGYHVE 521
S+N R ++ + T L F R + D+G+ Q +RTG H E
Sbjct: 50 SYNVRVMKVNHKRKLTRRLIIFCRSTLDSGVPRRVQLLRTGSHKE 94
>SB_49244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 457
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +2
Query: 329 PDGMVFNDYSPQEEKCDLPFNLDCSQRPKLQTPQPSLHCIRQNG 460
P G+V N++ Q+ + PF +P+L+ + C+++ G
Sbjct: 231 PPGVVHNNHRAQDSQSSEPFTWWAHTQPRLRADRRPSECVQKPG 274
>SB_42083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 489
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 10/71 (14%)
Frame = +2
Query: 449 RQNGYFSHEDPKECGKFYFCVDGKFNMITCP-----DGLV-----YNDKTGICTWPDEAK 598
R +G + P C ++C +T P DG+V Y+ TG C W + +
Sbjct: 65 RISGNAGYRIPTSCVAKHYCTTHAPGWMTSPHPSVADGVVTRTVCYHWTTGCCEWSNNIR 124
Query: 599 KKGCGAAEVFQ 631
+ CG V++
Sbjct: 125 VRNCGEFYVYE 135
>SB_38518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1399
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 168 PERSLPTPQLVPEKRARL-TRRSRTYVLKMDTLLTPNS 278
P L TP+L+P R+ TR+SRT + ++TP++
Sbjct: 571 PSPRLGTPRLLPHPRSTYRTRQSRTQMTTSSLVVTPHT 608
>SB_26620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 433
Score = 27.9 bits (59), Expect = 9.3
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Frame = +2
Query: 389 NLDCSQR-PKLQTPQPSLHCIRQNGYF---SHEDPKECGKFYFCVDGKFNMITCPDGLVY 556
N SQR P P S C++ G+F + + K C ++C + +I CP+G
Sbjct: 81 NSSSSQRKPYCVHPMNSSACLK--GFFLDKTSQTAKPCPPGFYCPQDQLCIIPCPEG--S 136
Query: 557 NDKTGICTWPDEAKKKGCGAA 619
+ +TG ++ GC A
Sbjct: 137 HCQTGRVVASTDSSSYGCRQA 157
>SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15)
Length = 134
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/50 (30%), Positives = 19/50 (38%)
Frame = +2
Query: 476 DPKECGKFYFCVDGKFNMITCPDGLVYNDKTGICTWPDEAKKKGCGAAEV 625
D C +Y C GK C G V++ + C W K G A V
Sbjct: 33 DSTSCQHYYHCTWGKAVRKDCGPGRVWDPRITNCNWDWAYKCVGTPAPSV 82
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,439,205
Number of Sequences: 59808
Number of extensions: 544410
Number of successful extensions: 1497
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1470
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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