Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0501
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 61 9e-10
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 52 4e-07
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 48 9e-06
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 46 3e-05
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 46 3e-05
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 44 1e-04
Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical pr... 32 0.38
AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical ... 31 0.66
Z82053-5|CAB04833.1| 103|Caenorhabditis elegans Hypothetical pr... 30 2.0
U88168-10|AAC24399.1| 407|Caenorhabditis elegans Hypothetical p... 29 2.7
U41993-8|AAA83449.1| 497|Caenorhabditis elegans Temporarily ass... 29 2.7
U41993-7|AAA83450.2| 733|Caenorhabditis elegans Temporarily ass... 29 2.7
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 29 3.5
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 29 3.5
AF038623-8|AAB94160.2| 631|Caenorhabditis elegans Hypothetical ... 29 4.7
U58750-13|AAB00653.1| 616|Caenorhabditis elegans Hypothetical p... 28 6.2
AC006629-2|AAK18928.1| 306|Caenorhabditis elegans Hypothetical ... 28 6.2
AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical ... 28 8.1
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 60.9 bits (141), Expect = 9e-10
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Frame = +2
Query: 248 EDGYFADAEQCDKYYECRGGDIIEK-LCPDGMVFNDYSPQEEKCDLPFNLDCSQRPKLQT 424
EDG + + C +C GG++ E C + FN + KCD P + +
Sbjct: 1186 EDGLYRNERDCSAILQCFGGELFEHPSCQSSLAFNQLTG---KCDYPQKVSGCENHG--- 1239
Query: 425 PQPSLHCIRQNGYFSHEDPKECGKFYFCVDGKFNMITCPDGLVYNDKTGICTWP 586
Q + C + + D C FY CV G+ ++TCP G V+N +C WP
Sbjct: 1240 -QTNGECSEHGSFIA--DANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWP 1290
Score = 38.3 bits (85), Expect = 0.006
Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 5/123 (4%)
Frame = +2
Query: 278 CDKYYE-CRGGDIIEKLCPDGMVF--NDYSPQEEKCDLPFNLDCSQRPKLQTPQPSLHCI 448
C + Y C G C D VF ++ P +E + + + + TP C
Sbjct: 44 CSREYSICVNGVRQAATCSDDSVFYEDECVPVDESPECRVDENTEED---DTPYAEFDCT 100
Query: 449 -RQNGYFSHEDPKECGKFYFCVDGKFNMITCPDGLVYNDKTGICTWP-DEAKKKGCGAAE 622
+Q+G +S + F CV G M CPD LV+N++T C DE K+ A +
Sbjct: 101 SKQDGIYSIGCSNQ---FISCVAGGAYMAKCPDSLVFNERTQDCRESCDEVKQDTTTAPQ 157
Query: 623 VFQ 631
V++
Sbjct: 158 VYE 160
Score = 35.1 bits (77), Expect = 0.054
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 248 EDGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLD 397
EDG +AD D +Y C + ++ CP G VFN ++ CD D
Sbjct: 197 EDGNYADGCN-DVFYSCSNNMVFQRYCPPGTVFN---INQQSCDFQCTTD 242
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 52.0 bits (119), Expect = 4e-07
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 8/128 (6%)
Frame = +2
Query: 242 CPE-DGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLD-CSQRPK 415
C E DGYF+ + C G I CPDG++F++ + + CD +N+D C
Sbjct: 239 CGEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSE---KNQMCDYEWNVDECDLESS 295
Query: 416 -----LQTPQPSLHCIRQ-NGYFSHEDPKECGKFYFCVDGKFNMITCPDGLVYNDKTGIC 577
+ + C NG ++ + + C +G+ N+ CP LV+N+ + IC
Sbjct: 296 GFMENYKASEALTPCTNMDNGLYALDCTP---RVLSCQNGRENIFECPPSLVFNENSLIC 352
Query: 578 TWPDEAKK 601
+P+ + K
Sbjct: 353 DYPETSLK 360
Score = 37.5 bits (83), Expect = 0.010
Identities = 32/123 (26%), Positives = 47/123 (38%), Gaps = 4/123 (3%)
Frame = +2
Query: 230 ITNLCP--EDGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLD-C 400
+ N+C +DG ++ Y C G C ++ Y P +KC +D C
Sbjct: 115 LENVCESLKDGVYSSGTCSSSYIICNSGSPRFLSCSTPLI---YDPTNKKCSWKGMIDEC 171
Query: 401 SQRPKLQTPQPSLHCIRQNGYFSHEDPKECGKFYF-CVDGKFNMITCPDGLVYNDKTGIC 577
SQ +C +G S EC +F C +G + CP LV+N C
Sbjct: 172 SQ-------VSGEYC-ESDGNISKS---ECSNVFFSCSEGIAHRRNCPANLVFNPAISSC 220
Query: 578 TWP 586
WP
Sbjct: 221 DWP 223
Score = 32.3 bits (70), Expect = 0.38
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 494 KFYFCVDGKFNMITCPDGLVYNDKTGICTW 583
+F CV G+ + CP+ LVY+ C W
Sbjct: 41 RFLACVSGEARYMDCPEDLVYHKNLEFCDW 70
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 47.6 bits (108), Expect = 9e-06
Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
Frame = +2
Query: 251 DGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDCSQRPKLQTPQ 430
DG +A Y +C G + C G+ +N+ + C +D + K
Sbjct: 894 DGIYALPYCSQDYVQCMQGRSLISSCAPGLFYNE---KNGMCAYKHTVDTCKIGKGSDII 950
Query: 431 PSLHCI-RQNGYFSHEDPKECGKFYF-CVDGKFNMITCPDGLVYNDKTGICTWPDEAKKK 604
S C + +GY+S C +YF C+D + ++CP+ L ++ ++ C +P +AK+
Sbjct: 951 DSNACFGKSDGYYS----AGCSSYYFSCIDEQIRKMSCPNSLKFSKESEKCVFPIDAKE- 1005
Query: 605 GCGAAEVFQFECPAV 649
C A PAV
Sbjct: 1006 -CSIATTLDRTPPAV 1019
Score = 35.5 bits (78), Expect = 0.041
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 488 CGKFYF-CVDGKFNMITCPDGLVYNDKTGICTWPDEAKKKGCGAAEVFQFE 637
C K +F C DG+ CP LV+N TG C + + +K +++++ E
Sbjct: 446 CTKSFFTCHDGRAFANDCPGDLVFNKATGTCDFAENCEKNYMEPSQIYKGE 496
Score = 35.1 bits (77), Expect = 0.054
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Frame = +2
Query: 242 CPE-DGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDCSQRPKL 418
CP+ DG +A KY +C E+ CP+G+ F+ + E+ R L
Sbjct: 43 CPDGDGLYA-VGCSSKYLQCVNNVEYEQSCPEGLYFDRLLARCERRSSNHLCATGDRVTL 101
Query: 419 QTPQP--SLHCI-RQNGYFSHEDPKECGK-FYFCVDGKFNMITCPDGLVY 556
Q S++C+ R +G ++ D C + +Y C +G M CP VY
Sbjct: 102 NVRQKAVSINCVGRLSGDYA-LDKTVCNENYYQCANGISYMRKCPYQQVY 150
Score = 34.7 bits (76), Expect = 0.071
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 251 DGYFADAEQCDKYY-ECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNL-DCSQ 406
D +F D +C Y+ +C G + K CP+ ++ Y + CD P ++ DC +
Sbjct: 208 DMHFTDNVKCSPYFWQCSNGKLFRKTCPEKLI---YVLDQNLCDFPESVKDCPE 258
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +2
Query: 251 DGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNL-DCSQRPKLQTP 427
DG A +Y C G ++ CP ++FN Y + CD N+ DC TP
Sbjct: 579 DGNHASGLCKSVFYICANGQVVATTCPANLIFNPYVGE---CDYSTNVRDCQGYQPTTTP 635
Query: 428 QPS 436
S
Sbjct: 636 SYS 638
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 437 LHCIRQNGYFSHEDPKECGKFYF-CVDGKFNMITCPDGLVYNDKTGICTWPDEAK 598
L C + G D +C +++ C +GK TCP+ L+Y +C +P+ K
Sbjct: 201 LDC-KVTGDMHFTDNVKCSPYFWQCSNGKLFRKTCPEKLIYVLDQNLCDFPESVK 254
Score = 31.9 bits (69), Expect = 0.50
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 497 FYFCVDGKFNMITCPDGLVYNDKTGICTW 583
FY C +G+ TCP L++N G C +
Sbjct: 591 FYICANGQVVATTCPANLIFNPYVGECDY 619
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 46.0 bits (104), Expect = 3e-05
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Frame = +2
Query: 251 DGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDCSQRPKLQTPQ 430
DG + + C GG CP +VFN P CD P D ++ L TPQ
Sbjct: 252 DGIHPNGVCSTNFLTCSGGIARIMDCPASLVFN---PTILVCDWP--RDVAECAGLPTPQ 306
Query: 431 PSLHCIRQNGYFSHEDPKEC-GKFYFCVDGKFNMITCPDGLVYNDKTGICTW 583
P+ C ++GYFS +C F C +G+ ++ CP GL +++ T C +
Sbjct: 307 PT--C-EEDGYFSF---GQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDY 352
Score = 39.5 bits (88), Expect = 0.002
Identities = 34/145 (23%), Positives = 57/145 (39%), Gaps = 25/145 (17%)
Frame = +2
Query: 242 CPEDGYFADAEQCDKYYECRGGDIIEKLCPDGMVFN------DYSPQEEKCDLPFNLDCS 403
C EDGYF+ + + C G I CP G+ F+ DY +C +
Sbjct: 309 CEEDGYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSECQETSGEESG 368
Query: 404 QRPKLQTPQPSLHCIRQ-NGYFSHE-----DPKEC-------------GKFYFCVDGKFN 526
+ Q+ + S + +G S E + +C + C +G +
Sbjct: 369 EASGEQSGEGSGEASGEASGESSGEGSGVEEQNQCVGLDNGLHAIGCSPRVLSCQNGHVD 428
Query: 527 MITCPDGLVYNDKTGICTWPDEAKK 601
+ CP LV+ND++ IC +P + K
Sbjct: 429 IFECPSSLVFNDQSLICDYPQTSLK 453
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 485 ECG-KFYFCVDGKFNMITCPDGLVYNDKTGICTW 583
EC +F C G ++ CP L+YN+ IC W
Sbjct: 36 ECEPQFLTCSGGIARIMDCPADLIYNEPLLICDW 69
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 497 FYFCVDGKFNMITCPDGLVYNDKTGICTWP 586
F C G ++ CP LV+N +C WP
Sbjct: 264 FLTCSGGIARIMDCPASLVFNPTILVCDWP 293
Score = 28.7 bits (61), Expect = 4.7
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +2
Query: 296 CRGGDIIEKLCPDGMVFNDYSPQEEKCDLP-FNLDCSQRPKL---QTPQPSLHCIRQNGY 463
C+ G + CP +VFND Q CD P +L C + +TP + C +G
Sbjct: 422 CQNGHVDIFECPSSLVFND---QSLICDYPQTSLKCLIEDTILIDETPIAAFDC-STDGL 477
Query: 464 FSHEDPKECGKFYFCVDGKFNMITC 538
FS D ++ C G+ TC
Sbjct: 478 FS--DGLCSATYHQCTAGQLINFTC 500
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 46.0 bits (104), Expect = 3e-05
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Frame = +2
Query: 251 DGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDCSQRPKLQTPQ 430
DG + + C GG CP +VFN P CD P D ++ L TPQ
Sbjct: 252 DGIHPNGVCSTNFLTCSGGIARIMDCPASLVFN---PTILVCDWP--RDVAECAGLPTPQ 306
Query: 431 PSLHCIRQNGYFSHEDPKEC-GKFYFCVDGKFNMITCPDGLVYNDKTGICTW 583
P+ C ++GYFS +C F C +G+ ++ CP GL +++ T C +
Sbjct: 307 PT--C-EEDGYFSF---GQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDY 352
Score = 39.5 bits (88), Expect = 0.002
Identities = 34/145 (23%), Positives = 57/145 (39%), Gaps = 25/145 (17%)
Frame = +2
Query: 242 CPEDGYFADAEQCDKYYECRGGDIIEKLCPDGMVFN------DYSPQEEKCDLPFNLDCS 403
C EDGYF+ + + C G I CP G+ F+ DY +C +
Sbjct: 309 CEEDGYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSECQETSGEESG 368
Query: 404 QRPKLQTPQPSLHCIRQ-NGYFSHE-----DPKEC-------------GKFYFCVDGKFN 526
+ Q+ + S + +G S E + +C + C +G +
Sbjct: 369 EASGEQSGEGSGEASGEASGESSGEGSGVEEQNQCVGLDNGLHAIGCSPRVLSCQNGHVD 428
Query: 527 MITCPDGLVYNDKTGICTWPDEAKK 601
+ CP LV+ND++ IC +P + K
Sbjct: 429 IFECPSSLVFNDQSLICDYPQTSLK 453
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 485 ECG-KFYFCVDGKFNMITCPDGLVYNDKTGICTW 583
EC +F C G ++ CP L+YN+ IC W
Sbjct: 36 ECEPQFLTCSGGIARIMDCPADLIYNEPLLICDW 69
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 497 FYFCVDGKFNMITCPDGLVYNDKTGICTWP 586
F C G ++ CP LV+N +C WP
Sbjct: 264 FLTCSGGIARIMDCPASLVFNPTILVCDWP 293
Score = 28.7 bits (61), Expect = 4.7
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +2
Query: 296 CRGGDIIEKLCPDGMVFNDYSPQEEKCDLP-FNLDCSQRPKL---QTPQPSLHCIRQNGY 463
C+ G + CP +VFND Q CD P +L C + +TP + C +G
Sbjct: 422 CQNGHVDIFECPSSLVFND---QSLICDYPQTSLKCLIEDTILIDETPIAAFDC-STDGL 477
Query: 464 FSHEDPKECGKFYFCVDGKFNMITC 538
FS D ++ C G+ TC
Sbjct: 478 FS--DGLCSATYHQCTAGQLINFTC 500
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 44.0 bits (99), Expect = 1e-04
Identities = 37/143 (25%), Positives = 57/143 (39%), Gaps = 21/143 (14%)
Frame = +2
Query: 233 TNLCP--EDGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDCS- 403
TN+C DG++ ++ C + C CP G+ YS + C CS
Sbjct: 478 TNVCSGKSDGFYPNSNNCGLFVLCLSSKSYSMSCPSGL---QYSASLKYCTTSTASGCSV 534
Query: 404 -----------QRPKLQTPQ-------PSLHCIRQNGYFSHEDPKECGKFYFCVDGKFNM 529
P + T P+ C + +G+F P +C KF CV+G
Sbjct: 535 TTTRAPTTTTKSAPTVTTTTRAPTTTTPAFKCTK-DGFFGV--PSDCLKFIRCVNGISYN 591
Query: 530 ITCPDGLVYNDKTGICTWPDEAK 598
CP+GL ++ T +C PD +K
Sbjct: 592 FECPNGLSFHADTMMCDRPDPSK 614
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +2
Query: 242 CPEDGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDCSQ 406
C +DG+F C K+ C G CP+G+ F+ CD P C++
Sbjct: 566 CTKDGFFGVPSDCLKFIRCVNGISYNFECPNGLSFH---ADTMMCDRPDPSKCAK 617
>Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical
protein ZK1053.4 protein.
Length = 667
Score = 32.3 bits (70), Expect = 0.38
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Frame = +2
Query: 308 DIIEKLCPDGMVFNDYSPQEEKCDLPFNL-DCSQRPKLQT---PQPSLHCIRQNGYFSHE 475
D++ L P+G YS +++ +L ++ DC + + P+ S +C + Y H
Sbjct: 463 DVLYMLQPNGQYLK-YSLNDDENELNLHVCDCCKTGTTENDLIPKYSEYCAKTCKYIIHV 521
Query: 476 DPKECGKF----YFCVDGKFNMITCPDGLVYNDK 565
+ K Y C +F+ +TCP GLVY+ +
Sbjct: 522 QNQFTEKMETYAYDCEKKRFHQVTCP-GLVYDSE 554
>AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical
protein W03F11.1 protein.
Length = 235
Score = 31.5 bits (68), Expect = 0.66
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +2
Query: 251 DGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDY 355
DGY D C +Y+C G ++ C +G +++ +
Sbjct: 163 DGYKPDVYNCKNFYQCASGLWTQRSCGEGTIWDQH 197
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 485 ECGKFYFCVDGKFNMITCPDGLVYNDKTGIC 577
+ KF+ C G++ ++TC Y+ TG C
Sbjct: 31 DSNKFWKCEGGRWIVVTCQINYFYDATTGFC 61
>Z82053-5|CAB04833.1| 103|Caenorhabditis elegans Hypothetical
protein T26E3.6 protein.
Length = 103
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +2
Query: 233 TNLCPEDGYFADA--EQCDKYYECRGGDII-EKLCPDGMVFNDYSPQEEKCDLPFN 391
T C G+F ++CDK YEC G D+ +C F P++++C ++
Sbjct: 4 TAFCDNIGFFKSPTEKRCDKDYECSGTDLCGHYVCTPLSEFRK-CPEDKRCGFEYS 58
>U88168-10|AAC24399.1| 407|Caenorhabditis elegans Hypothetical
protein K11H12.4 protein.
Length = 407
Score = 29.5 bits (63), Expect = 2.7
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = +3
Query: 207 KRARLTRRSRTYVL-KMDTLLTPNSVTNIMNAGVVI*LRNFAQTVWCSTTTVHRKRNVIY 383
K +LT + T L K++ L S I AG VI QT TTT R IY
Sbjct: 56 KNIQLTTGTTTITLDKLNDLNDDGSPKFITAAGSVI-----LQTSNNDTTT-SRLSGYIY 109
Query: 384 LSTWTALRDPSFKHLNLPSTVFV-KMATSLTRILRNAV 494
++T+ +DP+F L +T + KM T ++ N V
Sbjct: 110 VTTYLQAQDPTFSVYVLKTTQSISKMGMKSTVVVLNTV 147
>U41993-8|AAA83449.1| 497|Caenorhabditis elegans Temporarily
assigned gene nameprotein 153, isoform a protein.
Length = 497
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 359 PQEEKCDLPFNLDCSQRPKLQTPQPSLHCI 448
P + K + C+++PK+QT PS HCI
Sbjct: 79 PDKVKMKEQAPVKCAEQPKIQTILPSSHCI 108
>U41993-7|AAA83450.2| 733|Caenorhabditis elegans Temporarily
assigned gene nameprotein 153, isoform b protein.
Length = 733
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 359 PQEEKCDLPFNLDCSQRPKLQTPQPSLHCI 448
P + K + C+++PK+QT PS HCI
Sbjct: 315 PDKVKMKEQAPVKCAEQPKIQTILPSSHCI 344
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 251 DGYFADAEQCDKYYECRGGDIIEKLCPDGMVFND 352
DG+++ E D Y C G +I CP + F++
Sbjct: 219 DGFYSFGECSDHYTACSNGYLIPMQCPARLAFDE 252
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 251 DGYFADAEQCDKYYECRGGDIIEKLCPDGMVFND 352
DG+++ E D Y C G +I CP + F++
Sbjct: 219 DGFYSFGECSDHYTACSNGYLIPMQCPARLAFDE 252
>AF038623-8|AAB94160.2| 631|Caenorhabditis elegans Hypothetical
protein T08B6.4 protein.
Length = 631
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Frame = +2
Query: 476 DPKECGKFYFCV--DGKFNMITCPDGLVYND-----KTGICTWPDEAK 598
DP +C F C+ + + + P+ ++ N KTG+ TWP++ +
Sbjct: 306 DPNQCSSFRICIAPNDFLDDVKVPECMLGNQIDVMFKTGVVTWPNKGR 353
>U58750-13|AAB00653.1| 616|Caenorhabditis elegans Hypothetical
protein F55G1.13 protein.
Length = 616
Score = 28.3 bits (60), Expect = 6.2
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Frame = +2
Query: 242 CPEDGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLD-CSQRPKL 418
C E+ Y+ D C+ EC DII P +PQ + ++D C + L
Sbjct: 440 CEEERYYCDETPCENGGECE--DIIG---PPNSYNCTCTPQWTGFNCTIDVDECVEDTTL 494
Query: 419 -QTPQPSLHCIRQNG-YFSHEDPKECGK 496
+T P C+ NG Y+ P GK
Sbjct: 495 CKTKDPDATCVNTNGSYYCVCSPNMFGK 522
>AC006629-2|AAK18928.1| 306|Caenorhabditis elegans Hypothetical
protein F12E12.4 protein.
Length = 306
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -3
Query: 496 FTAFLRILVREVAILTNTVEGRLRCLKLGSLRAV 395
F AFL +L E +I NTVEG L+ + RAV
Sbjct: 202 FQAFLEVLYLEDSIDDNTVEGILQLADMYDSRAV 235
>AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical
protein Y53C10A.4 protein.
Length = 908
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 401 SQRPKLQTPQPSLHCIRQNGYFSHEDPKE 487
SQ P L+T L+ +RQN + E P+E
Sbjct: 746 SQEPSLKTINDRLNALRQNSILAQEVPQE 774
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,886,306
Number of Sequences: 27780
Number of extensions: 400616
Number of successful extensions: 1180
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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