Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0500
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           27   0.43 
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    26   0.99 
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    26   0.99 
Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.        24   5.3  
AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.      24   5.3  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    24   5.3  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    24   5.3  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   7.0  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   9.2  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 27.5 bits (58), Expect = 0.43
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +3

Query: 279 GGQEPDECGRAHREGFVRRLHQVHPPGDHRVSDSGLAHEGPREE 410
           GG+ P E  RA  E  V  L   HPP +     S    E P ++
Sbjct: 430 GGRAPPETERARLESIVTELFPQHPPFNWPSISSEEEQEQPADQ 473


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 26.2 bits (55), Expect = 0.99
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 273 DPGGQEPDECGRAHREGFVRRLHQVH 350
           +P    PDEC RA REG   R+   H
Sbjct: 142 NPSLSAPDECARACREGEPPRICYYH 167


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 26.2 bits (55), Expect = 0.99
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 273 DPGGQEPDECGRAHREGFVRRLHQVH 350
           +P    PDEC RA REG   R+   H
Sbjct: 142 NPSLSAPDECARACREGEPPRICYYH 167


>Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.
          Length = 115

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 483 KPDPRSGGVPEPRRQRLGT 539
           K  P +GGV +P R R GT
Sbjct: 26  KSAPATGGVKKPHRYRPGT 44


>AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.
          Length = 136

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 483 KPDPRSGGVPEPRRQRLGT 539
           K  P +GGV +P R R GT
Sbjct: 28  KSAPSTGGVKKPHRYRPGT 46


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 185 W*QYRAIRWR*ASKSCLVEDSGH 117
           W Q+RA R R  + + ++ DSGH
Sbjct: 204 WVQHRAQRNRTNNNNTIITDSGH 226


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 226 ISGELIVSGLDSATSLIQAAKNLMNAVVLTVKAS 327
           + G LIVS     +  +Q  + L++ +VLTV  S
Sbjct: 80  VGGILIVSAYAPPSWTVQEFEELLDNIVLTVSGS 113


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 98  PGRSPSSVPNPPLNKTCSPTS 160
           PG+SP+  P+P   ++ SP +
Sbjct: 443 PGQSPTQSPSPGSQQSLSPAN 463


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +3

Query: 279 GGQEPDECGRAHREGFVRRLHQVHPP 356
           GG+ P E  R   E  V  L   HPP
Sbjct: 367 GGRTPPETERDRLEHIVSDLFPQHPP 392


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 601,711
Number of Sequences: 2352
Number of extensions: 11302
Number of successful extensions: 74
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 74
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)