Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0498
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50378| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 258 3e-69
SB_18652| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 212 3e-55
SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 6e-48
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 2e-47
SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.) 180 1e-45
SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.) 179 3e-45
SB_8314| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 128 6e-30
SB_6621| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 2e-22
SB_8138| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 89 3e-18
SB_26353| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.9e-18) 61 1e-09
SB_54283| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.4e-13) 56 3e-08
SB_20979| Best HMM Match : ATP-gua_PtransN (HMM E-Value=5.6e-08) 52 7e-07
SB_47199| Best HMM Match : ATP-gua_PtransN (HMM E-Value=9.6e-15) 36 0.046
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_21382| Best HMM Match : Ail_Lom (HMM E-Value=2.5) 32 0.57
SB_57048| Best HMM Match : S-antigen (HMM E-Value=3.4) 31 0.76
SB_871| Best HMM Match : 7tm_1 (HMM E-Value=0.0017) 31 1.3
SB_32465| Best HMM Match : Chromo (HMM E-Value=3.5e-16) 30 2.3
SB_28448| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_15059| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_35368| Best HMM Match : UIM (HMM E-Value=6.3e-06) 29 3.0
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 29 3.0
SB_5784| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_44086| Best HMM Match : BTB (HMM E-Value=1.8e-23) 29 4.0
SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05) 29 5.3
SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042) 29 5.3
SB_10727| Best HMM Match : Drf_FH1 (HMM E-Value=3.8) 29 5.3
SB_6151| Best HMM Match : Extensin_2 (HMM E-Value=2.6) 28 7.0
SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_35966| Best HMM Match : CpaB (HMM E-Value=3.6) 28 7.0
SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08) 28 7.0
SB_3| Best HMM Match : Peptidase_C21 (HMM E-Value=5) 28 7.0
SB_48991| Best HMM Match : Rad52_Rad22 (HMM E-Value=5.2e-12) 28 9.3
SB_33669| Best HMM Match : EMP70 (HMM E-Value=3.9e-11) 28 9.3
SB_21299| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_11767| Best HMM Match : Kinesin (HMM E-Value=0) 28 9.3
SB_3503| Best HMM Match : Rad52_Rad22 (HMM E-Value=1e-24) 28 9.3
SB_41260| Best HMM Match : DUF1081 (HMM E-Value=1.4) 28 9.3
SB_24839| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
>SB_50378| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 969
Score = 258 bits (632), Expect = 3e-69
Identities = 124/230 (53%), Positives = 157/230 (68%), Gaps = 1/230 (0%)
Frame = +3
Query: 42 VDAATLEKLEAGFSK-LQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENL 218
++ A +E+ F + L+ + KSLLKKYLT +VF+SLK KKTS G+ L DCI SGV NL
Sbjct: 614 IERAAIEEAHLKFPEDLKKPEVKSLLKKYLTEDVFNSLKEKKTSRGAGLYDCINSGVVNL 673
Query: 219 DSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVV 398
DSG G+YA D E Y VF ELFD IIEDYH +K + H + NLD G F+
Sbjct: 674 DSGTGVYAADEECYEVFGELFDKIIEDYHAPYKLEENHKSDMDPEKVDAPNLDAEGAFIR 733
Query: 399 STRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEGELKGTFYPLTGMSKETQQQL 578
STR+R R+L+GY P LT + ++E KV G L+SL G+L G +YPL+GM + T+QQL
Sbjct: 734 STRIRVARNLKGYALTPGLTRKERVDVESKVVGVLNSLTGDLAGKYYPLSGMDEATRQQL 793
Query: 579 IDDHFLFKEGDRFLQAXNACRFWPTGRGIYHNENKTFLVWCNXEDHLRII 728
+DDHFLFK+GDRFL+A + WP GRGI+HN +KTFLVW N ED LRII
Sbjct: 794 VDDHFLFKKGDRFLEAAGVNKMWPEGRGIFHNNDKTFLVWVNEEDQLRII 843
Score = 194 bits (472), Expect = 8e-50
Identities = 97/200 (48%), Positives = 127/200 (63%)
Frame = +3
Query: 6 DGCSSARKAATMVDAATLEKLEAGFSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTL 185
D + +K + AA K L+ + KSL+KKYLT E+F+ LK+KKT G TL
Sbjct: 171 DMYNGVKKLLEIEKAAVEAKRNVFPEVLKKPEVKSLMKKYLTEEMFNELKDKKTELGVTL 230
Query: 186 LDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTL 365
DCI SGVENLDSG GIYA D ESY +FA LFD IIEDYH +K KH +
Sbjct: 231 SDCINSGVENLDSGTGIYAGDEESYKLFAPLFDKIIEDYHAPYKLEQKHTSDMNPEKVEA 290
Query: 366 GNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEGELKGTFYPL 545
+LDP G F+ STR+R R+L+GY P L++ E+E+KV SL G+L G ++PL
Sbjct: 291 PDLDPEGSFIRSTRIRVARNLKGYALTPALSKKARLEIEEKVKNVFESLTGDLAGKYHPL 350
Query: 546 TGMSKETQQQLIDDHFLFKE 605
GM++ET+QQL++DHFLFK+
Sbjct: 351 DGMTEETRQQLVNDHFLFKK 370
Score = 94.3 bits (224), Expect = 9e-20
Identities = 40/59 (67%), Positives = 47/59 (79%)
Frame = +3
Query: 552 MSKETQQQLIDDHFLFKEGDRFLQAXNACRFWPTGRGIYHNENKTFLVWCNXEDHLRII 728
M + T+QQL+DDHFLFK+GDRFL+A R WP GRGI+HN +KTFLVW N ED LRII
Sbjct: 1 MDEATRQQLVDDHFLFKKGDRFLEAAGVNREWPEGRGIFHNNDKTFLVWVNEEDQLRII 59
Score = 66.1 bits (154), Expect = 3e-11
Identities = 27/41 (65%), Positives = 31/41 (75%)
Frame = +3
Query: 606 GDRFLQAXNACRFWPTGRGIYHNENKTFLVWCNXEDHLRII 728
GDRFL+A + WP GRGI+HN +KTFLVW N ED LRII
Sbjct: 451 GDRFLEAAGVNKLWPEGRGIFHNNDKTFLVWVNEEDQLRII 491
>SB_18652| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 725
Score = 212 bits (517), Expect = 3e-55
Identities = 117/262 (44%), Positives = 157/262 (59%), Gaps = 28/262 (10%)
Frame = +3
Query: 27 KAATMVDAATLEKLEAGFSK-LQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTL------ 185
K+ ++ A +EK + F + L + KSLLKKYLT E+F+SLK+KKT+ G +L
Sbjct: 337 KSLLEIERAAIEKQRSVFPEALNKEECKSLLKKYLTAEMFNSLKDKKTAKGISLYDCINS 396
Query: 186 ----------------LDCIQSGVENLDSGVG-----IYAPDAESYSVFAELFDPIIEDY 302
L+CI+ ++ V + D ESYS+F+ LFD I+E Y
Sbjct: 397 GVVNLDSSCGVYAGQRLECIRHIANSISVRVADVFYHLSTGDEESYSLFSPLFDKIVEHY 456
Query: 303 HNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEME 482
H +K DKH + T NLDP G F+ STR+R R+L+GY P LT + E+E
Sbjct: 457 HAPYKLADKHTSDMNPEKVTAPNLDPDGVFIRSTRIRVARNLKGYALTPGLTRKERNEIE 516
Query: 483 DKVSGTLSSLEGELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAXNACRFWPTGRG 662
KV+ L SL G+L G +YPLTGM + T+Q+L+DDHFLFK+GDRFL+A + WP GRG
Sbjct: 517 KKVTEVLCSLTGDLAGKYYPLTGMDEATRQKLVDDHFLFKKGDRFLEAAGVNKLWPEGRG 576
Query: 663 IYHNENKTFLVWCNXEDHLRII 728
I+HN +KTFLVW N ED LRII
Sbjct: 577 IFHNNDKTFLVWINEEDQLRII 598
Score = 105 bits (251), Expect(2) = 1e-42
Identities = 44/70 (62%), Positives = 54/70 (77%)
Frame = +3
Query: 519 ELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAXNACRFWPTGRGIYHNENKTFLVW 698
+L G +YPLTGM + T++QL++DHFLFK+GDRFL A + WP GRGI+HN KTFLVW
Sbjct: 150 DLAGKYYPLTGMDEVTREQLVNDHFLFKKGDRFLDAAGCNKEWPEGRGIFHNNEKTFLVW 209
Query: 699 CNXEDHLRII 728
N ED LRII
Sbjct: 210 VNEEDQLRII 219
Score = 86.6 bits (205), Expect(2) = 1e-42
Identities = 61/150 (40%), Positives = 74/150 (49%), Gaps = 16/150 (10%)
Frame = +3
Query: 39 MVDAATLEKLEAGFS-----KLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQS 203
M DAA EK + + K + K LLKKYLT +VFD LK KKT G
Sbjct: 8 MADAAEAEKYRSKNAYPVPLKSAKCNPKCLLKKYLTNQVFDQLKTKKTKRGDGGCSDGGG 67
Query: 204 GVENLDSGVGIYAP---------DAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDV 356
G ++D G Y D ESY+VFA LFD +IEDYH+ +K D H D
Sbjct: 68 GGGDVDDDDGEYIDADVAVVIVGDEESYTVFAPLFDKVIEDYHSPYKLKDGHTSDMNPDR 127
Query: 357 DTLGNLDPAGEFVVSTRVRCGRSLEG--YP 440
+LDP F+ STR+R GR L G YP
Sbjct: 128 VNAPDLDPDNRFIRSTRIRVGRDLAGKYYP 157
>SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 775
Score = 188 bits (457), Expect = 6e-48
Identities = 98/212 (46%), Positives = 130/212 (61%), Gaps = 5/212 (2%)
Frame = +3
Query: 108 SLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN----LDSGVGIYAPDAESYSVFAE 275
+L+ K+LT ++ L++K T G TL IQ+GV+N S VG+ A D ESY FAE
Sbjct: 61 NLMAKHLTPRLYVKLRDKSTPNGYTLDQAIQTGVDNPGHPFISTVGLVAGDEESYDTFAE 120
Query: 276 LFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCL 455
LFDP+IE+ H+GFKK+DKH G D ++V+S+RVR GRS+ G+ P
Sbjct: 121 LFDPVIEERHSGFKKSDKHKTDLDSSKIRGGKFDE--KYVLSSRVRTGRSIRGFSLPPHC 178
Query: 456 TESQYKEMEDKVSGTLSSLEGELKGTFYPLTGMSKETQQQLIDDHFLF-KEGDRFLQAXN 632
T ++ +E+E V+ L L G+L G +YPL GMS QQQLIDDHFLF K L
Sbjct: 179 TRAERREVERIVNDALDGLGGDLNGKYYPLNGMSDAQQQQLIDDHFLFDKPVSPLLTCAG 238
Query: 633 ACRFWPTGRGIYHNENKTFLVWCNXEDHLRII 728
R WP RGI+HN++K FL+W N EDH R+I
Sbjct: 239 MARDWPDARGIWHNDSKNFLIWVNEEDHTRVI 270
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 186 bits (453), Expect = 2e-47
Identities = 100/210 (47%), Positives = 129/210 (61%), Gaps = 5/210 (2%)
Frame = +3
Query: 114 LKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN----LDSGVGIYAPDAESYSVFAELF 281
+ K LT+E++ SL++K T G TL D IQ+GV+N VG A D ESY VFAEL
Sbjct: 2323 MAKVLTKEIYRSLRDKSTKNGFTLDDIIQTGVDNPGHPFIMTVGCVAGDEESYDVFAELL 2382
Query: 282 DPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTE 461
DP+IE H G+KKTDKH D G LDP ++V+S+RVR GRS+ G+ P +
Sbjct: 2383 DPVIELRHGGYKKTDKHKTDLNPDNLKGGALDP--KYVLSSRVRTGRSIRGFCLPPHCSR 2440
Query: 462 SQYKEMEDKVSGTLSSLEGELKGTFYPLTGMSKETQQQLIDDHFLF-KEGDRFLQAXNAC 638
++ + +E L+ L+GE KG +YPL M+ E Q+QLI+DHFLF K L
Sbjct: 2441 AERRSVEKISVDALAKLDGEFKGKYYPLNKMTDEEQEQLINDHFLFDKPVSPLLTCAGMA 2500
Query: 639 RFWPTGRGIYHNENKTFLVWCNXEDHLRII 728
R WP RGI+HNENK FLVW N EDH R+I
Sbjct: 2501 RDWPDARGIWHNENKNFLVWVNEEDHTRVI 2530
>SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1115
Score = 180 bits (437), Expect = 1e-45
Identities = 96/210 (45%), Positives = 126/210 (60%), Gaps = 5/210 (2%)
Frame = +3
Query: 114 LKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN----LDSGVGIYAPDAESYSVFAELF 281
+ K +T++V+ L N +T G TL IQ+GV+N VG A D ESY VFA++F
Sbjct: 1 MAKCMTKDVYQRLSNLRTPSGYTLDMAIQTGVDNPGHPFIMTVGCVAGDEESYDVFADMF 60
Query: 282 DPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTE 461
DP+IE H+G++KTD H D +G D ++V+S RVR GRS+ G P T
Sbjct: 61 DPVIEKRHDGYRKTDMHKTDLNPD-HLIGGDDLDEKYVLSCRVRTGRSIRGLGLPPHCTR 119
Query: 462 SQYKEMEDKVSGTLSSLEGELKGTFYPLTGMSKETQQQLIDDHFLF-KEGDRFLQAXNAC 638
++ +E+E L SL+GE KG +YPL+ M+ Q QLIDDHFLF K L A
Sbjct: 120 AERREVEKVSVEALDSLDGEFKGKYYPLSNMTAAEQDQLIDDHFLFDKPVSPLLLASRMA 179
Query: 639 RFWPTGRGIYHNENKTFLVWCNXEDHLRII 728
R WP RGI+HN+NKTFLVW N EDH R+I
Sbjct: 180 RDWPDARGIWHNDNKTFLVWVNEEDHTRVI 209
Score = 173 bits (420), Expect = 2e-43
Identities = 95/210 (45%), Positives = 125/210 (59%), Gaps = 5/210 (2%)
Frame = +3
Query: 114 LKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN----LDSGVGIYAPDAESYSVFAELF 281
+ K LT V++ L KT G TL IQ+GV+N VG A D ESY VFA++F
Sbjct: 370 MAKCLTPAVYNMLSVLKTPTGYTLDMAIQTGVDNPGHPFIMTVGCVAGDEESYDVFADMF 429
Query: 282 DPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTE 461
DP+IE HNG+KKT KH + + +G D ++V+S RVR GRS+ G P +
Sbjct: 430 DPVIEKRHNGYKKTAKHKT-DLNPSNLIGGDDLDEKYVLSCRVRTGRSIRGLCLPPWCSR 488
Query: 462 SQYKEMEDKVSGTLSSLEGELKGTFYPLTGMSKETQQQLIDDHFLF-KEGDRFLQAXNAC 638
++ +E+E V+ L+ L+G L G +Y L M++ Q QLIDDHFLF K L A
Sbjct: 489 AERREVEKIVTSALAELDGPLAGKYYSLMTMTEAEQDQLIDDHFLFDKPVSPLLLASRMA 548
Query: 639 RFWPTGRGIYHNENKTFLVWCNXEDHLRII 728
R WP RGI+HN+NKTFLVW N EDH R+I
Sbjct: 549 RDWPDARGIWHNDNKTFLVWVNEEDHTRVI 578
Score = 173 bits (420), Expect = 2e-43
Identities = 101/247 (40%), Positives = 141/247 (57%), Gaps = 6/247 (2%)
Frame = +3
Query: 6 DGCSSARKAATMVDAATLEKLEAGFSKLQGSD-SKSLLKKYLTREVFDSLKNKKTSFGST 182
+ S AR+ A +A +K + ++ G + ++ + K+LTR+V++ L N KT G T
Sbjct: 731 ESVSKAREEAIKKEAER-QKASSTLRRVPGPEQAQHYMAKFLTRDVYNKLCNLKTPSGFT 789
Query: 183 LLDCIQSGVENLDSG----VGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWG 350
L IQ+GV+N VG A D E+Y VFA L DP+IE HNG+ K KH
Sbjct: 790 LDGVIQTGVDNPGHPFIFTVGCVAGDEETYKVFAALLDPVIEARHNGYLKGAKHVTDLNP 849
Query: 351 DVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEGELKG 530
D + +G D FV+S RVR GRS+ G P T ++ +E+E L++L+G LKG
Sbjct: 850 D-NLVGGDDLDANFVLSCRVRTGRSIRGLGLPPHCTRAERREVEKITVDALATLDGPLKG 908
Query: 531 TFYPLTGMSKETQQQLIDDHFLF-KEGDRFLQAXNACRFWPTGRGIYHNENKTFLVWCNX 707
+YPL+ M+ Q+QLI+DHFLF K L + R WP RGI+HN+ K FLVW N
Sbjct: 909 KYYPLSKMTDAEQEQLINDHFLFDKPVSPLLLSARMARDWPDARGIWHNDAKNFLVWVNE 968
Query: 708 EDHLRII 728
EDH R+I
Sbjct: 969 EDHTRVI 975
>SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 179 bits (435), Expect = 3e-45
Identities = 96/210 (45%), Positives = 127/210 (60%), Gaps = 5/210 (2%)
Frame = +3
Query: 114 LKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN----LDSGVGIYAPDAESYSVFAELF 281
+ ++L+ ++ LK+K T G TL IQ+GV+N S VG+ A D ESY VFA+LF
Sbjct: 404 MARHLSPRLYTKLKDKVTPNGYTLDMAIQTGVDNPGHPFISTVGLVAGDEESYDVFADLF 463
Query: 282 DPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTE 461
DP+IE+ HNG+KKTDKH G+ D +V+STR R GRS+ G+ P T
Sbjct: 464 DPVIEERHNGYKKTDKHVTDLNHRKLKGGSFDE--RYVLSTRCRTGRSIRGFSLPPHCTR 521
Query: 462 SQYKEMEDKVSGTLSSLEGELKGTFYPLTGMSKETQQQLIDDHFLF-KEGDRFLQAXNAC 638
++ + +E V L L G+L GT+YPL M+ E Q+QLI+DHFLF K L
Sbjct: 522 AERRSVEKVVVDALDQLGGDLSGTYYPLGKMTNEEQEQLINDHFLFDKPVSPLLTCAGMA 581
Query: 639 RFWPTGRGIYHNENKTFLVWCNXEDHLRII 728
R WP RGI+HN+NK FLVW N EDH R+I
Sbjct: 582 RDWPDARGIWHNKNKNFLVWVNEEDHTRLI 611
>SB_8314| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 309
Score = 128 bits (308), Expect = 6e-30
Identities = 67/168 (39%), Positives = 94/168 (55%), Gaps = 1/168 (0%)
Frame = +3
Query: 228 VGIYAPDAESYSVFAELFDPIIEDYHNGFK-KTDKHPPKNWGDVDTLGNLDPAGEFVVST 404
+G +A D ESY F + + P+I+ YH GF T KH + + D A ++ST
Sbjct: 1 MGCHAGDKESYDDFKDFYYPVIQAYHKGFDINTSKHVTDMDPEKISTELSDSAKAKIIST 60
Query: 405 RVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEGELKGTFYPLTGMSKETQQQLID 584
R+R R+L +P NP ++ E+ D ++ SL +L G Y T M+ E +Q+L+D
Sbjct: 61 RIRVARNLSMFPLNPGGSKESRLEIIDLMAKVYDSLGDDLAGNLYRHTTMTDEERQKLVD 120
Query: 585 DHFLFKEGDRFLQAXNACRFWPTGRGIYHNENKTFLVWCNXEDHLRII 728
DHFLF+ D+ A FWP GRGI+ N+ KTFL W N DHLRII
Sbjct: 121 DHFLFRGKDKMQAASGYHEFWPEGRGIFINKAKTFLNWINEGDHLRII 168
>SB_6621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 103 bits (247), Expect = 2e-22
Identities = 65/152 (42%), Positives = 81/152 (53%), Gaps = 9/152 (5%)
Frame = +3
Query: 105 KSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAP---------DAES 257
K LLKKYLT +VFD LK KKT G G ++D G Y D ES
Sbjct: 174 KCLLKKYLTNQVFDQLKTKKTKRGDGGCSDGGGGGGDVDDDDGEYIDADVAVVIVGDEES 233
Query: 258 YSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGY 437
Y+VFA LFD +IEDYH+ +K D H D +LDP F+ STR+R GR+L+GY
Sbjct: 234 YTVFAPLFDKVIEDYHSPYKLKDGHTSDMNPDRVNAPDLDPDNRFIRSTRIRVGRNLKGY 293
Query: 438 PFNPCLTESQYKEMEDKVSGTLSSLEGELKGT 533
P LT+ + E+E K S T S +LK T
Sbjct: 294 GLAPSLTKKERVELEKKASFTAKS--SQLKTT 323
>SB_8138| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 383
Score = 89.4 bits (212), Expect = 3e-18
Identities = 60/181 (33%), Positives = 85/181 (46%), Gaps = 1/181 (0%)
Frame = +3
Query: 189 DCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFK-KTDKHPPKNWGDVDTL 365
D SG I D ESY F + + P+I+ YH GF T KH + +
Sbjct: 80 DTKSSGPAKWTLARAINTGDKESYDDFKDFYYPVIQAYHKGFDINTSKHVTDMDPEKIST 139
Query: 366 GNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEGELKGTFYPL 545
D A ++STR+R R+L +P NP ++ E+ D ++ SL +L G Y
Sbjct: 140 ELSDSAKAKIISTRIRVARNLSMFPLNPGGSKESRLEIIDLMAKVYDSLGDDLAGNLYRH 199
Query: 546 TGMSKETQQQLIDDHFLFKEGDRFLQAXNACRFWPTGRGIYHNENKTFLVWCNXEDHLRI 725
T M+ E +Q+L+DDHFLF+ ++ N+ KTFL W N DHLRI
Sbjct: 200 TTMTDEERQKLVDDHFLFRS------------------RVFINKAKTFLNWINEGDHLRI 241
Query: 726 I 728
I
Sbjct: 242 I 242
>SB_26353| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.9e-18)
Length = 138
Score = 60.9 bits (141), Expect = 1e-09
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +3
Query: 519 ELKGTFYPLTGMSKETQQQLIDDHFLFKEGDR-FLQAXNACRFWPTGRGIYHNENKTFLV 695
E +G +Y L+ M+ + L +H L + + R WP GRG++H ++K+FL+
Sbjct: 2 EFEGRYYALSSMTPQDYHHLSLEHVLSDATKHPLIVSSGMSRDWPDGRGVWHTKDKSFLI 61
Query: 696 WCNXEDHLRII 728
W N EDHLR+I
Sbjct: 62 WVNEEDHLRVI 72
>SB_54283| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.4e-13)
Length = 490
Score = 56.0 bits (129), Expect = 3e-08
Identities = 37/122 (30%), Positives = 61/122 (50%)
Frame = +3
Query: 354 VDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEGELKGT 533
V G LD VVS RVR RSL+G+PF + ++ +E+++ V L SL+ E
Sbjct: 279 VGVTGTLDA---HVVSCRVRVVRSLQGFPFAWVCSPNERREIQNVVKQALDSLK-EPDSE 334
Query: 534 FYPLTGMSKETQQQLIDDHFLFKEGDRFLQAXNACRFWPTGRGIYHNENKTFLVWCNXED 713
+Y L +S +++ LI H +F+ Q + W +GRGI+ + + N +
Sbjct: 335 YYKLARISSKSRDTLITKHGIFRN-----QKLDCDDTWSSGRGIWRDGTSNAIALVNERE 389
Query: 714 HL 719
H+
Sbjct: 390 HI 391
Score = 51.6 bits (118), Expect = 7e-07
Identities = 24/72 (33%), Positives = 41/72 (56%)
Frame = +3
Query: 87 LQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSV 266
LQ + K++ ++L +++ K+ KT +G L D + V D+ +GI A D E Y
Sbjct: 63 LQQKNRKTVASQFLNEAIYEEYKDAKTVYGFRLFDILSYDVSYRDT-IGIRATDEECYYT 121
Query: 267 FAELFDPIIEDY 302
F +LFDP+I ++
Sbjct: 122 FIKLFDPVISNF 133
>SB_20979| Best HMM Match : ATP-gua_PtransN (HMM E-Value=5.6e-08)
Length = 322
Score = 51.6 bits (118), Expect = 7e-07
Identities = 24/72 (33%), Positives = 41/72 (56%)
Frame = +3
Query: 87 LQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSV 266
LQ + K++ ++L +++ K+ KT +G L D + V D+ +GI A D E Y
Sbjct: 54 LQQKNRKTVASQFLNEAIYEEYKDAKTVYGFRLFDILSYDVSYRDT-IGIRATDEECYYT 112
Query: 267 FAELFDPIIEDY 302
F +LFDP+I ++
Sbjct: 113 FIKLFDPVISNF 124
Score = 37.1 bits (82), Expect = 0.015
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = +3
Query: 354 VDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEG 518
V G LD VVS RVR RSL+G+PF + ++ +E+++ V L SL+G
Sbjct: 270 VGVTGTLDA---HVVSCRVRVVRSLQGFPFAWVCSPNERREIQNVVKQALDSLKG 321
>SB_47199| Best HMM Match : ATP-gua_PtransN (HMM E-Value=9.6e-15)
Length = 132
Score = 35.5 bits (78), Expect = 0.046
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Frame = +3
Query: 108 SLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLD----SGVGIYAPDAESY 260
+++ ++LT E++ L ++KTS G TL IQ GV+N S GI A D ES+
Sbjct: 77 NIMARHLTPEMYVHLCDRKTSNGFTLDQAIQPGVDNPTHPNISPCGIVAGDEESF 131
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 32.3 bits (70), Expect = 0.43
Identities = 26/85 (30%), Positives = 36/85 (42%)
Frame = +1
Query: 22 PEKPQQWSTPQPSRNWRLVSASSRDPTLSRC*RSTLPGKYSTA*RTRRPHSDPPSLTVSN 201
P P STP S T S ++P ST P S P + + +
Sbjct: 252 PSTPSMPSTPSTPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPSTPSTP-STPSTPSAPS 310
Query: 202 RVSRTWTPASVSTRRTPSRTPCSPS 276
S TP++ ST +TPS TPC+P+
Sbjct: 311 TPSTPSTPSTPSTPKTPS-TPCTPN 334
Score = 32.3 bits (70), Expect = 0.43
Identities = 26/85 (30%), Positives = 36/85 (42%)
Frame = +1
Query: 22 PEKPQQWSTPQPSRNWRLVSASSRDPTLSRC*RSTLPGKYSTA*RTRRPHSDPPSLTVSN 201
P P STP S T S ++P ST P S P + + +
Sbjct: 802 PSTPSMPSTPSTPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPSTPSTP-STPSTPSAPS 860
Query: 202 RVSRTWTPASVSTRRTPSRTPCSPS 276
S TP++ ST +TPS TPC+P+
Sbjct: 861 TPSTPSTPSTPSTPKTPS-TPCTPN 884
Score = 31.9 bits (69), Expect = 0.57
Identities = 30/91 (32%), Positives = 38/91 (41%)
Frame = +1
Query: 4 LTVVQVPEKPQQWSTPQPSRNWRLVSASSRDPTLSRC*RSTLPGKYSTA*RTRRPHSDPP 183
L+ P P STP R S S T S + P ST T HS P
Sbjct: 9 LSTPSTPCTPSTPSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPSTP-STPCTHSTPS 67
Query: 184 SLTVSNRVSRTWTPASVSTRRTPSRTPCSPS 276
+ + + S TP++ ST TPS TP +PS
Sbjct: 68 APSTPSTPSTPCTPSTPSTPSTPS-TPSTPS 97
Score = 30.7 bits (66), Expect = 1.3
Identities = 28/90 (31%), Positives = 38/90 (42%)
Frame = +1
Query: 7 TVVQVPEKPQQWSTPQPSRNWRLVSASSRDPTLSRC*RSTLPGKYSTA*RTRRPHSDPPS 186
++ P P STP + + S T S PG ST P +
Sbjct: 674 SLTHTPSTPSTPSTPSTPSTPSMPNTPSTPSTPSTPSTPITPGTPSTP---STPSAPGTP 730
Query: 187 LTVSNRVSRTWTPASVSTRRTPSRTPCSPS 276
+T S +S TP++ STR TPS TP +PS
Sbjct: 731 ITPST-LSTPSTPSTPSTRSTPS-TPSTPS 758
Score = 29.9 bits (64), Expect = 2.3
Identities = 29/85 (34%), Positives = 35/85 (41%)
Frame = +1
Query: 22 PEKPQQWSTPQPSRNWRLVSASSRDPTLSRC*RSTLPGKYSTA*RTRRPHSDPPSLTVSN 201
P P STP S S T S PG ST P + +T S
Sbjct: 129 PSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPITPGTPSTP---STPSAPGTPITPST 185
Query: 202 RVSRTWTPASVSTRRTPSRTPCSPS 276
+S TP++ STR TPS TP +PS
Sbjct: 186 -LSTPSTPSTPSTRSTPS-TPSTPS 208
>SB_21382| Best HMM Match : Ail_Lom (HMM E-Value=2.5)
Length = 473
Score = 31.9 bits (69), Expect = 0.57
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = +3
Query: 402 TRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEGELKGTFYPLTGMSKETQQQLI 581
T +CG G + L Y ++ D GT+ L KGT L K T ++L+
Sbjct: 32 TMRKCGTRFRGLCASVGLVSGDYAQVWDSFQGTMRELVTRFKGTMRELVTRFKGTMRELV 91
>SB_57048| Best HMM Match : S-antigen (HMM E-Value=3.4)
Length = 242
Score = 31.5 bits (68), Expect = 0.76
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 163 RPHSDPPSLTVSNRVSRTWTPASVSTRRTPSRTPCSP 273
RPH+DP TWTP +T P+RTP P
Sbjct: 175 RPHTDPTQTPHGPHTDPTWTPHRPNT--DPTRTPHGP 209
>SB_871| Best HMM Match : 7tm_1 (HMM E-Value=0.0017)
Length = 1675
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = -3
Query: 556 DMPVRG*NVPLSSPSRLDRVPETLSSISLYWDSVRQGLKGYPSSERPQRTRVETTNSPAG 377
D+P++ N P SP+++ + P S +++ +R YP+ RPQ + N G
Sbjct: 1566 DIPLKSHNSP--SPAQVTQCPIFRPSHTIHHPPLRSRNVRYPAQVRPQYPLQASLNVKKG 1623
Query: 376 SRLP 365
+R+P
Sbjct: 1624 ARVP 1627
>SB_32465| Best HMM Match : Chromo (HMM E-Value=3.5e-16)
Length = 411
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 178 PPSLTVSNRVSRTWTPASVSTRRTPSRTP 264
P ++VS RV+ T +P +S R TP +TP
Sbjct: 275 PGPVSVSPRVATTHSPPPISPRVTPEKTP 303
>SB_28448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -3
Query: 568 WVSFDMPVRG*NVPLSSPSRLD-RVPETLSSISLYWDSVRQGLKGYPSSERPQRTRVETT 392
W+ VRG NV +P LD R P+ + ++ + + + P E+ + T V T
Sbjct: 691 WLDISTDVRGLNVTFETPKLLDLRRPDEIKTVDIESTPLLLEFETVPLGEQGKATLVMTN 750
Query: 391 NSPAGSR 371
S +R
Sbjct: 751 TSAIRAR 757
>SB_15059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 947
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = -3
Query: 523 SSPSRLDRVPETLSSISLYWDSVRQGLKGYPSSERPQRTRVETTNSPAGSRLPSVSTSP 347
S+P R+ + TLSSI + + KG P RPQ + + + AGS + +P
Sbjct: 622 SAPPRVRHLDSTLSSIDNHVTRINSARKGRPL--RPQSSPAKVSFKKAGSEVEETPFNP 678
>SB_35368| Best HMM Match : UIM (HMM E-Value=6.3e-06)
Length = 362
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -3
Query: 232 PTPESKFSTPDWIQSRRVDPNEVFLFFRLSNTS 134
P P+ KFS P I SR +D E L F L+ S
Sbjct: 5 PKPKEKFSEPVIIASRNLDSVEARLAFNLTTVS 37
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +3
Query: 429 EGYPFNPCLTESQYKEMEDKVSGTLSSLEGELKGTFYPLTGMSKETQQQLIDD 587
+GY ES+ EME + + +EGE++ Y +SK+ +Q L ++
Sbjct: 818 KGYQDQIRSLESRNNEMEQEYGDKMLEMEGEIEDLGYNFDQLSKKLRQDLTEN 870
>SB_5784| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = +2
Query: 506 QPRGRAQGHVLPPHRHVEGDPAAAHRRPLPVQ 601
QPR R + P RH EGD AH PL VQ
Sbjct: 60 QPRLRPSPYAADPARHGEGD---AHTEPLEVQ 88
>SB_44086| Best HMM Match : BTB (HMM E-Value=1.8e-23)
Length = 417
Score = 29.1 bits (62), Expect = 4.0
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Frame = +3
Query: 18 SARKAATMVDAAT--LEKLEAGFSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLD 191
S++ T + + T + K + G+S G DS + R V SL + G+T
Sbjct: 271 SSKARVTSLSSVTRFMSKEDCGWSYSGGEDSLCIKVSNQVRLVAVSLFGSE---GNTYT- 326
Query: 192 CIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHP 335
++ VE G +Y + ++S +EL +P Y+NGF + HP
Sbjct: 327 -VELAVEK--EGQQVYQQEKRTFSS-SELMNPTNGSYYNGFVVSFDHP 370
>SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05)
Length = 385
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +3
Query: 27 KAATMVDAATLEKLEAGFSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSG 206
KAA + + L KL AG++ L D+ L + LT E LK K S + +Q
Sbjct: 195 KAAVQLLKSVLPKLTAGYADLYHGDA---LVEVLTTEWHGDLKEKYPQDVSGIYQLVQGQ 251
Query: 207 VENLD 221
+E+ D
Sbjct: 252 LESRD 256
>SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042)
Length = 792
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = +2
Query: 479 GGQGLRHPVQPRGRAQGHVLPPHRHVEGDPAAAHRRPLPV-QGGRPLPAG 625
GG + HP+ G PP H P H P PV GG P+ G
Sbjct: 232 GGPRMDHPMGHGGPPMDRGGPPMMHGGPGPRMPHSGPEPVPPGGPPMQGG 281
>SB_10727| Best HMM Match : Drf_FH1 (HMM E-Value=3.8)
Length = 215
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Frame = +2
Query: 491 LRHPVQPRGRAQGHVLPPHRHVEGDPAAA---HRRPLPVQGGRPL 616
L+HPV PR + V PP V D A H RP + PL
Sbjct: 62 LKHPVDPRKKVGHPVTPPPPEVSQDLEIATRIHERPSMLHSHTPL 106
>SB_6151| Best HMM Match : Extensin_2 (HMM E-Value=2.6)
Length = 287
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
Frame = +2
Query: 419 PLARGVPLQPLPHRVPVQGDGGQGLRHPVQPRGRAQGHVLPPHRHVEGDPAAAHRRPLPV 598
P+ + P+P V P+ Q H +P H V+ PA A P+P
Sbjct: 193 PIPAHAQVNPIPEHTQVDPIPAHAQVSPIP--AHTQVHPIPAHAQVDPIPAHAQVNPIPE 250
Query: 599 QGG-RPLPA 622
P+PA
Sbjct: 251 HAQVDPIPA 259
>SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2174
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -3
Query: 442 KGYPSSERPQRTRVETTNS-PAGSRLPSVSTSP 347
+G SSERP+R+R T + P S LP +++P
Sbjct: 1178 RGSLSSERPERSRRRRTETEPRDSSLPCTASTP 1210
>SB_35966| Best HMM Match : CpaB (HMM E-Value=3.6)
Length = 277
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/40 (37%), Positives = 28/40 (70%)
Frame = -2
Query: 158 VLQAVEYFPGKVLLQQRLRVGSLELAETSLQFLEGCGVDH 39
+ +AV P +V+L R+++GS +LA+ L+ L+G G++H
Sbjct: 204 ITRAVIDGPLRVVL--RVQIGSCDLADEHLRKLDGGGLEH 241
>SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08)
Length = 293
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = +2
Query: 437 PLQPLPHRVPVQGDGGQGLRHPVQPRGRAQGHVLPPHRHVEGDPAAAHRRPLPVQGGRPL 616
P P+P +VP G G + HP G P + PA +P P QG P
Sbjct: 121 PYSPIPPQVPYPGAAGPPMPHPTASVYPPPGGYPPTSYPPQPYPA----QPYPQQGYPPQ 176
Query: 617 P 619
P
Sbjct: 177 P 177
>SB_3| Best HMM Match : Peptidase_C21 (HMM E-Value=5)
Length = 186
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 195 IQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNW-GDVDT 362
I +GV N + + E S+ F+P +DY NG++ TD H W G++ T
Sbjct: 72 IDAGVTNTTEHICVTDITYEQISI---TFEPY-QDYANGYRATDLHGKVAWVGELST 124
>SB_48991| Best HMM Match : Rad52_Rad22 (HMM E-Value=5.2e-12)
Length = 353
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 69 EAGFSKLQGSDSKSL-LKKYLTREVFDSLKNKKTSFGSTLLDCI 197
+ G+ +G SK+L L+K V D LK +FG L +C+
Sbjct: 30 DVGYGVSEGMKSKALSLEKARKEAVTDGLKRALKNFGQALGNCV 73
>SB_33669| Best HMM Match : EMP70 (HMM E-Value=3.9e-11)
Length = 809
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 193 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 80
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 65 QDRAADKNHVYISYR-DCKKLDEEAFPEDLDEAPWSVL 101
>SB_21299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2630
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -3
Query: 553 MPVR-G*NVPLSSPSRLDRVPETLSSISLYWDSV 455
+PVR +VP +SP+ L + +T SSI + WD +
Sbjct: 957 LPVRTAEDVPDTSPNNLRVLNQTSSSIEIAWDGI 990
>SB_11767| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 1230
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 234 IYAPDAESYSVFAELFDPIIEDYHNGFKKT-DKHPPKNWGDVDTLGNLDPAG 386
++ PDA V+ +P+++ G+ T + G T+G LD G
Sbjct: 635 VFQPDASQVEVYESCIEPLVKSCLEGYNATVFAYGQTGSGKTYTIGGLDTGG 686
>SB_3503| Best HMM Match : Rad52_Rad22 (HMM E-Value=1e-24)
Length = 398
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 69 EAGFSKLQGSDSKSL-LKKYLTREVFDSLKNKKTSFGSTLLDCI 197
+ G+ +G SK+L L+K V D LK +FG L +C+
Sbjct: 75 DVGYGVSEGMKSKALSLEKARKEAVTDGLKRALKNFGQALGNCV 118
>SB_41260| Best HMM Match : DUF1081 (HMM E-Value=1.4)
Length = 617
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 4 LTVVQVPEKPQQWSTPQPSRNWRLVSASSRDPTLS 108
LT V+VP+ Q +T RN + S+S+ DP L+
Sbjct: 534 LTAVEVPKPGDQDTTLDKERNNSVTSSSTPDPPLT 568
>SB_24839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 4 LTVVQVPEKPQQWSTPQPSRNWRLVSASSRDPTLS 108
LT V+VP+ Q +T RN + S+S+ DP L+
Sbjct: 70 LTAVEVPKPGDQDTTLDKERNNSVTSSSTPDPPLT 104
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,726,338
Number of Sequences: 59808
Number of extensions: 432898
Number of successful extensions: 1923
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1880
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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