Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0490
         (800 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    23   2.1  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   6.5  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   8.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   8.7  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = -1

Query: 269 LARAVLRGIYHWIGIAFHCDDPASYSVGCLLVGTL 165
           + R ++ G+ HW    FH   P + S   ++   L
Sbjct: 60  IERVIMPGVTHWHSPRFHAYFPTANSYPAIVADIL 94


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 407 WVLLRSSLRCYFSHAYSLV 351
           W++L S++R Y S A+  +
Sbjct: 498 WLVLSSTVRAYASRAFKKI 516


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 598 NLCQTLLHLFEIDDFFGLLKTLETICVNENIFDESH 705
           N+   L  L +   +F LLK L+ +  + NI ++SH
Sbjct: 79  NIYTVLTALTKKPLWFKLLKNLKMVQNHNNIREKSH 114


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 598 NLCQTLLHLFEIDDFFGLLKTLETICVNENIFDESH 705
           N+   L  L +   +F LLK L+ +  + NI ++SH
Sbjct: 79  NIYTVLTALTKKPLWFKLLKNLKMVQNHNNIREKSH 114


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,141
Number of Sequences: 336
Number of extensions: 3961
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)