Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0490
         (800 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding pr...    26   1.6  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    25   3.6  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    24   4.8  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    24   4.8  
EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic anhy...    23   8.3  

>AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding
           protein AgamOBP44 protein.
          Length = 327

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +1

Query: 403 TQAAITCLGLVTYPTKGLK 459
           TQAA+ CL ++ YP K LK
Sbjct: 156 TQAALDCLVMLRYPEKLLK 174


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 22  LNFVIVTYFGEQNKSRFLYMFTK 90
           +NF I   FGE+ K  FL +F K
Sbjct: 358 VNFFIYVIFGEKFKRIFLLLFCK 380


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
 Frame = -1

Query: 332 VTPGRIAELAPSK*ESLPTL---VLA---RAVLRGIYHWIGIAFHCDDPASYSVGCLLVG 171
           V PG +  L P +    P     V+A   R ++ G+ HW    FH   P + S   ++  
Sbjct: 43  VQPGYLRPLIPDEAPQQPEKWEEVMADVERVIMPGVTHWHSPKFHAYFPTANSYPAIVAD 102

Query: 170 TLH-MIVGGGFT 138
            L   I   GFT
Sbjct: 103 MLSGAIACIGFT 114


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
 Frame = -1

Query: 332 VTPGRIAELAPSK*ESLPTL---VLA---RAVLRGIYHWIGIAFHCDDPASYSVGCLLVG 171
           V PG +  L P +    P     V+A   R ++ G+ HW    FH   P + S   ++  
Sbjct: 74  VQPGYLRPLIPDEAPQQPEKWEEVMADVERVIMPGVTHWHSPKFHAYFPTANSYPAIVAD 133

Query: 170 TLH-MIVGGGFT 138
            L   I   GFT
Sbjct: 134 MLSGAIACIGFT 145


>EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic
           anhydrase protein.
          Length = 255

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1

Query: 221 FHCDDPASYSVGCLLVGTLHMIVGG 147
           F C+ PA+  +GC++    H+IV G
Sbjct: 78  FSCE-PAALELGCVVNNIKHIIVCG 101


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 828,658
Number of Sequences: 2352
Number of extensions: 17202
Number of successful extensions: 38
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)