Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0488
         (750 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094930-1|AAM11283.1|  156|Drosophila melanogaster RH50436p pro...    34   0.24 
AY070968-1|AAL48590.1|  156|Drosophila melanogaster RE06807p pro...    34   0.24 
AE014134-3154|AAF53839.2|  156|Drosophila melanogaster CG10447-P...    34   0.24 

>AY094930-1|AAM11283.1|  156|Drosophila melanogaster RH50436p
           protein.
          Length = 156

 Score = 33.9 bits (74), Expect = 0.24
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = +2

Query: 20  FDNYVKPLRLYLTKYRE 70
           FDNYV+PL +YL KYRE
Sbjct: 111 FDNYVEPLSIYLQKYRE 127


>AY070968-1|AAL48590.1|  156|Drosophila melanogaster RE06807p
           protein.
          Length = 156

 Score = 33.9 bits (74), Expect = 0.24
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = +2

Query: 20  FDNYVKPLRLYLTKYRE 70
           FDNYV+PL +YL KYRE
Sbjct: 111 FDNYVEPLSIYLQKYRE 127


>AE014134-3154|AAF53839.2|  156|Drosophila melanogaster CG10447-PA
           protein.
          Length = 156

 Score = 33.9 bits (74), Expect = 0.24
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = +2

Query: 20  FDNYVKPLRLYLTKYRE 70
           FDNYV+PL +YL KYRE
Sbjct: 111 FDNYVEPLSIYLQKYRE 127


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,374,577
Number of Sequences: 53049
Number of extensions: 541117
Number of successful extensions: 985
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)