Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0486
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...   116   1e-28
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...   101   4e-24
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    33   0.003
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    32   0.005
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    28   0.064
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    26   0.26 
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    25   0.79 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    25   0.79 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.8  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   2.4  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   4.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.3  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   7.3  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   7.3  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   9.7  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   9.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.7  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score =  116 bits (280), Expect = 1e-28
 Identities = 49/116 (42%), Positives = 78/116 (67%)
 Frame = +3

Query: 297 MGKIVFKINHFVDDISQLYNKFPEERFVGRYEFVNPVIYIRDIEIVKRITIKDFEHFLDH 476
           M   V +  H  + I+ +Y +FP +R+VG Y F+ P + +RD+E++K+I +K+F+ F DH
Sbjct: 1   MWPFVVQKKHITEIIADIYRQFPTDRYVGYYHFMTPTLLLRDVELIKQIGVKEFDSFHDH 60

Query: 477 RTIVNEETDPIFGRNLFSLKGQEWKDMRSTLSPAFTSSKMKLMMPLIVEVGEQMIN 644
            ++ N  T+P+    L +L G++WK+MR+TLSPAFTSSK+K M  LI E  E  ++
Sbjct: 61  VSVSNTNTEPLLSEALTNLPGEKWKEMRATLSPAFTSSKIKNMYSLISECAENFVD 116


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score =  101 bits (243), Expect = 4e-24
 Identities = 53/158 (33%), Positives = 84/158 (53%), Gaps = 1/158 (0%)
 Frame = +3

Query: 207 LALLLYL-KQIYCYFSKHEIKSITPLPILGNMGKIVFKINHFVDDISQLYNKFPEERFVG 383
           L LL Y+  + Y Y+    + +  P    G+   +V +  H  + I  +YN+F    +VG
Sbjct: 10  LLLLYYIYSKHYSYWQSKNVPTDKPFLFFGSFYNLVIRKEHIFERIRTIYNQFSTP-YVG 68

Query: 384 RYEFVNPVIYIRDIEIVKRITIKDFEHFLDHRTIVNEETDPIFGRNLFSLKGQEWKDMRS 563
            Y F  PV+ IR  EI++++ +KDF+ F +     NE  DP+    LF  K   W+++R+
Sbjct: 69  IYIFHQPVLLIRSPEILRKVLVKDFDKFTNRNIATNESADPLAFHTLFISKDAVWRNLRT 128

Query: 564 TLSPAFTSSKMKLMMPLIVEVGEQMINALKKNIKNSGV 677
            LSP FTS KMKLM PL+ E  + +   L+ + +   V
Sbjct: 129 KLSPVFTSGKMKLMFPLMQECVDDLRRFLEDHTEEIDV 166


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 32.7 bits (71), Expect = 0.003
 Identities = 33/166 (19%), Positives = 68/166 (40%), Gaps = 6/166 (3%)
 Frame = +3

Query: 177 IIIIWTLVIGLALLLYLKQIYCYFS-KHEIKSITPLPILGNMGKIVFKINHFVDDISQLY 353
           ++++ T++   A+ L     YCY + K  I S+  L  L           + +   +   
Sbjct: 1   MLVLTTVLTAAAVFLLFYLFYCYKTIKQHIYSLISLSYLPGPPVNDIISGNILPLYTSAE 60

Query: 354 NKFPEERFVGRYEFVNPVIYIRDIEIVKRITIKDFEHFLDHRTIVNEET-----DPIFGR 518
           N F + R  GR  +    +    +     ++ +D E  L + T + +           G 
Sbjct: 61  NIFKQLREWGRLYYPIYKLNAAHLAAANILSPEDCELVLSNPTHMEKSAIYNLLHDWLGT 120

Query: 519 NLFSLKGQEWKDMRSTLSPAFTSSKMKLMMPLIVEVGEQMINALKK 656
            L +  G +W+  R  L+PAF  S ++  + +  E  ++++  LK+
Sbjct: 121 GLLTSTGLKWQTRRKILTPAFHFSILQQFVAIFNEETDKLVEVLKE 166


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 31.9 bits (69), Expect = 0.005
 Identities = 37/171 (21%), Positives = 72/171 (42%), Gaps = 11/171 (6%)
 Frame = +3

Query: 177 IIIIWTLVIGLALLLYLKQIYCYFS-KHEIKSITPLPILGNMGKIVFKINHFVD-DISQL 350
           ++++ T++   A+ L     YCY + K  I S+  L  L         +N  +  +I  L
Sbjct: 1   MLVLTTVLTAAAVFLLFYLFYCYKTIKQHIYSLISLSYLPGP-----PVNDIISGNIPPL 55

Query: 351 Y----NKFPEERFVGRYEFVNPVIYIRDIEIVKRITIKDFEHFLDHRTIVNEET-----D 503
           Y    N F + R  GR  +    +    +     ++ +D E  L + T + +        
Sbjct: 56  YTSAENIFKQLREWGRLYYPIYKLNAAHLAAANILSPEDCELVLSNPTHMEKSAIYNLLH 115

Query: 504 PIFGRNLFSLKGQEWKDMRSTLSPAFTSSKMKLMMPLIVEVGEQMINALKK 656
              G  L +  G +W+  R  L+PAF  S ++  + +  E  ++++  LK+
Sbjct: 116 DWLGTGLLTSTGLKWQTRRKILTPAFHFSILQQFVAIFNEETDKLVEVLKE 166


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 28.3 bits (60), Expect = 0.064
 Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 5/142 (3%)
 Frame = +3

Query: 282 PILGNMGKIVFKINH-FVDDISQLYNKFPEERF----VGRYEFVNPVIYIRDIEIVKRIT 446
           PI+GN+  I+      F+ D  +    +P  +      G    +NP     D+E+V   T
Sbjct: 40  PIIGNLFDIMRTPEQMFLADRERGLKYYPIYKLDVCGTGGVNLLNP----EDVELVLTDT 95

Query: 447 IKDFEHFLDHRTIVNEETDPIFGRNLFSLKGQEWKDMRSTLSPAFTSSKMKLMMPLIVEV 626
            ++ + F+ H            G  L + +G +W++ R  L+PAF  + ++  + +  E 
Sbjct: 96  KQNTKSFIYHFL------HSWLGTGLLTSRGPKWQNRRKILTPAFHFNILQEFIQIFNEE 149

Query: 627 GEQMINALKKNIKNSGVGYVDI 692
            ++++  L+     S   Y+D+
Sbjct: 150 TKRLVEDLE---AESHKPYIDV 168


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 11/47 (23%), Positives = 26/47 (55%)
 Frame = +3

Query: 513 GRNLFSLKGQEWKDMRSTLSPAFTSSKMKLMMPLIVEVGEQMINALK 653
           G  L +  G +W++ R  L+PAF  + ++  + +  E  ++++  L+
Sbjct: 112 GTGLLTSAGPKWQNRRKILTPAFHFNILQEFIQIFNEETKRLVEDLE 158


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = -1

Query: 136 LFFCFLVVQIRDVSHVS*YKHQIA--IQLIYLYLSIFVITELVRL 8
           +F  + +   + VS+   ++ +I   IQL YLY  + VI+  ++L
Sbjct: 191 MFVSYNIYVCQTVSNFEYFQRKILLMIQLYYLYFDVIVISTFLQL 235


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = -1

Query: 136 LFFCFLVVQIRDVSHVS*YKHQIA--IQLIYLYLSIFVITELVRL 8
           +F  + +   + VS+   ++ +I   IQL YLY  + VI+  ++L
Sbjct: 117 MFVSYNIYVCQTVSNFEYFQRKILLMIQLYYLYFDVIVISTFLQL 161


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = -1

Query: 343 EISSTKWLILKTILPMLPSMGSGVMLLISCLLK 245
           E+   +W+ L     ++P +G+ +  +  CL K
Sbjct: 115 EVERVQWIWLLIFAYLIPEVGTWIRAVRKCLYK 147


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = -1

Query: 343 EISSTKWLILKTILPMLPSMGSGVMLLISCLLK 245
           E+   +W+ L     ++P +G+ +  +  CL K
Sbjct: 115 EVERVQWIWLLIFAYLIPEVGTWIRAVRKCLYK 147


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 497 NRSHFRKESVFFERPGMERYAIYFI 571
           N+     ESV FER  M+ +AI  I
Sbjct: 106 NQKKIFDESVIFERKVMKNFAILII 130


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -3

Query: 341 NIINKMVNLEDDLAHVAQYGKRGYALDFMLAEVAIYLLQV 222
           N I  +VNL  +L  VA+     Y+L  +L     ++L V
Sbjct: 228 NKIKHLVNLHKNLVKVAKDHNSLYSLHLLLWITVTFILLV 267


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 367 SGNLLYNCEISSTKWLILKTILP 299
           SGN   +C+   T   ILK +LP
Sbjct: 642 SGNSTVDCDDVGTFGAILKKLLP 664


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = +2

Query: 143 SYQTEQKKRYNDYHYMDISDRFGSLTVPEAD 235
           S QTE    YN +H    S+   +   P  +
Sbjct: 468 SVQTESSDNYNSFHQFYSSESSQNQVAPTGE 498


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = +2

Query: 143 SYQTEQKKRYNDYHYMDISDRFGSLTVPEAD 235
           S QTE    YN +H    S+   +   P  +
Sbjct: 416 SVQTESSDNYNSFHQFYSSESSQNQVAPTGE 446


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = +2

Query: 641 QRVKKEH*KLWCRIR 685
           +R+KKE+ K+W ++R
Sbjct: 88  KRLKKEYPKIWEQLR 102


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 13/44 (29%), Positives = 18/44 (40%)
 Frame = +3

Query: 360 FPEERFVGRYEFVNPVIYIRDIEIVKRITIKDFEHFLDHRTIVN 491
           F    FV  Y     V+YI    ++ R  I +    L H T +N
Sbjct: 162 FDVPNFVNEYVQAIEVLYICSYTVLIRNKISNLNTSLIHSTHLN 205


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 518 ESVFFERPGMERYAIYFIASLHQLQDEAY 604
           ESV + +P ++   +  + S HQ Q   Y
Sbjct: 772 ESVDYTKPLVDAQTMNLLRSYHQQQSHHY 800


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,539
Number of Sequences: 336
Number of extensions: 3614
Number of successful extensions: 24
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)