Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0486
         (700 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    89   5e-20
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    30   0.018
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    29   0.042
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   6.4  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   6.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   8.5  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   8.5  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 88.6 bits (210), Expect = 5e-20
 Identities = 54/167 (32%), Positives = 84/167 (50%), Gaps = 3/167 (1%)
 Frame = +3

Query: 180 IIIWTLVIGLALLLYLKQIYCYFSKHEIKSITPLPILGNMGKIVF---KINHFVDDISQL 350
           I+    V+ LAL  YL   + ++    +    P+P  G    ++       HFV DI   
Sbjct: 7   ILCGIAVLFLALYYYLTSTFDFWKSRGVVGPKPVPFFGTTKDLILVKKSTAHFVKDI--- 63

Query: 351 YNKFPEERFVGRYEFVNPVIYIRDIEIVKRITIKDFEHFLDHRTIVNEETDPIFGRNLFS 530
           Y K+  E  VG Y   +P + + D E++K I I+DF  F +    V E T+P+   +L +
Sbjct: 64  YEKYKNEPMVGLYATRSPFLLLNDPELIKDILIRDFSKFANRGLGVFERTEPL-SPHLLN 122

Query: 531 LKGQEWKDMRSTLSPAFTSSKMKLMMPLIVEVGEQMINALKKNIKNS 671
           L+ + W+ +RS LSP FTS K+K M  LI+E    +   L K I+ +
Sbjct: 123 LEVERWRPLRSRLSPIFTSGKLKEMFYLIIECSLNLETYLDKLIEKN 169


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 30.3 bits (65), Expect = 0.018
 Identities = 17/81 (20%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
 Frame = +3

Query: 429 IVKRITIKDFEHFLDHRTIVNEETD-----PIFGRNLFSLKGQEWKDMRSTLSPAFTSSK 593
           ++  I  +D E  L     +++ T+     P  G  L    GQ+W++ R  ++P F  + 
Sbjct: 90  VICLIDPRDVEIILSSNVYIDKSTEYRFFKPWLGDGLLISTGQKWRNHRKLIAPTFHLNV 149

Query: 594 MKLMMPLIVEVGEQMINALKK 656
           +K  + L       ++  ++K
Sbjct: 150 LKSFIDLFNANARSVVEKMRK 170


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 29.1 bits (62), Expect = 0.042
 Identities = 25/119 (21%), Positives = 51/119 (42%), Gaps = 5/119 (4%)
 Frame = +3

Query: 315 KINHFVDDISQLYNKFPEERFVGRYEFVNPVIYIRDIEIV----KRITIKDFEHFLDHRT 482
           KI+    D++Q Y    +E  +  +  ++ V   +DIE +     R  ++  +  + H  
Sbjct: 78  KIHDAYKDLNQRYGALCKEEALWNFPMIS-VFSRQDIETIIRRNSRYPLRPPQEVISHYR 136

Query: 483 IVNEETDPIFGRNLFSLKGQEWKDMRSTLSPAFTSSKMKL-MMPLIVEVGEQMINALKK 656
               +     G  L + +GQ W D+R  L+   T++   L   P +  V +  I  +++
Sbjct: 137 RTRRDRYTNLG--LVNEQGQTWHDLRVALTSELTAASTVLGFFPALNIVADSFIELIRR 193


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 602 YDALNSRSWR 631
           YD  NSRSWR
Sbjct: 211 YDFRNSRSWR 220


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/29 (24%), Positives = 17/29 (58%)
 Frame = -3

Query: 575 WR*SRSHIFPFLAFQRKQIPSENGIGFLI 489
           W+ S +H+   L  +  ++   +G+G+L+
Sbjct: 109 WQLSTAHLLAQLFLKSTEVTPRDGLGWLL 137


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 516 RNLFSLKGQEWKDM 557
           ++L  LK  EWKD+
Sbjct: 741 QSLMKLKSPEWKDL 754


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/47 (21%), Positives = 24/47 (51%)
 Frame = -3

Query: 434 YNLNISDVDHRIYKLVSTNESLFWKFVVQLRNIINKMVNLEDDLAHV 294
           +N+ IS++      L+  N     + +  L+N  ++++ + DD  H+
Sbjct: 368 WNMKISNLSFDKQSLLKENTVTCQEAMHMLKNADSQLLVISDDNIHI 414


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,917
Number of Sequences: 438
Number of extensions: 3904
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)