Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0480
(750 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC11E3.09 |pyp3||protein-tyrosine phosphatase Pyp3|Schizosacch... 91 2e-19
SPAC26F1.10c |pyp1||tyrosine phosphatase Pyp1|Schizosaccharomyce... 84 2e-17
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 80 4e-16
SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual 29 0.71
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 27 2.9
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 27 3.8
SPBPB2B2.06c |||phosphoprotein phosphatase |Schizosaccharomyces ... 26 6.6
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 26 6.6
>SPAC11E3.09 |pyp3||protein-tyrosine phosphatase
Pyp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 303
Score = 90.6 bits (215), Expect = 2e-19
Identities = 54/148 (36%), Positives = 78/148 (52%), Gaps = 6/148 (4%)
Frame = +1
Query: 316 KNRYKDIAPYDATRVILNN--GPTGDYINASYINMPIPNSDLVLTYIATQGPLASTVGDF 489
+NRY +I PY+ TRV L+ DYINAS + +P T+IATQGP ++++ F
Sbjct: 52 RNRYSNIVPYENTRVRLDPMWKEACDYINASIVKIPSGK-----TFIATQGPTSNSIDVF 106
Query: 490 WQMVWES--ESSLIVMLTVVSERWXAKCHQYWP--KVGTTPLXATNALTVLTNSEQNFGH 657
W+MVW+S +S +IVMLT + ER KC YWP T + + + V + +
Sbjct: 107 WKMVWQSVPKSGIIVMLTKLRERHRLKCDIYWPVELFETLNIGDLSVILVKVYTLTSLNE 166
Query: 658 YIRREMTLXEXSGASRNVTHLQYTXWPD 741
RE L + G + + H Y WPD
Sbjct: 167 VQVREFELNK-DGVKKKILHFYYNGWPD 193
>SPAC26F1.10c |pyp1||tyrosine phosphatase Pyp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 550
Score = 84.2 bits (199), Expect = 2e-17
Identities = 55/149 (36%), Positives = 73/149 (48%), Gaps = 7/149 (4%)
Frame = +1
Query: 316 KNRYKDIAPYDATRVILNN-GPTG-DYINASYINMPIPNSDLVLTYIATQGPLASTVGDF 489
KNRY DI PY+ TRV L P+ DYINAS+I N YIA QG ++ ++ DF
Sbjct: 298 KNRYTDIVPYNCTRVHLKRTSPSELDYINASFIKTETSN------YIACQGSISRSISDF 351
Query: 490 WQMVWESESSL--IVMLTVVSERWXAKCHQYWPKVGTTPLXATNALTVLTNSEQNF--GH 657
W MVW++ ++ IVML + E C YWP G V SE+N
Sbjct: 352 WHMVWDNVENIGTIVMLGSLFEAGREMCTAYWPSNGIGDKQVYGDYCVKQISEENVDNSR 411
Query: 658 YIRREMTLXEXSGAS-RNVTHLQYTXWPD 741
+I R+ + + S + V H QY W D
Sbjct: 412 FILRKFEIQNANFPSVKKVHHYQYPNWSD 440
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 79.8 bits (188), Expect = 4e-16
Identities = 57/158 (36%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Frame = +1
Query: 286 AASKLPHNINKNRYKDIAPYDATRVILNNGPTG--DYINASYINMPIPNSDLVLTYIATQ 459
A+S+ KNRY DI PYD TRV L P G DYINAS+I+ + N YIA Q
Sbjct: 451 ASSRSTSISRKNRYTDIVPYDKTRVRLAV-PKGCSDYINASHID--VGNKK----YIACQ 503
Query: 460 GPLASTVGDFWQMVWESE--SSLIVMLTVVSERWXAKCHQYWPKVGTTPLXATNALTVLT 633
P T+ DFW+MVW + + +IVMLT + E KC QYWP L L +
Sbjct: 504 APKPGTLLDFWEMVWHNSGTNGVIVMLTNLYEAGSEKCSQYWPDNKDHALCLEGGLRISV 563
Query: 634 NSEQNFGHY-IRREM-TLXEXSGASRNVTHLQYTXWPD 741
+ F + + L + +G + + H W D
Sbjct: 564 QKYETFEDLKVNTHLFRLDKPNGPPKYIHHFWVHTWFD 601
>SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1202
Score = 29.1 bits (62), Expect = 0.71
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +1
Query: 307 NINKNRYKDIAPYDATRV--ILNNGPTGDYINASYINM-PIPNSDLVLTY 447
+I KN + ++ P R+ I G + + S+ N+ PI NSDL+L Y
Sbjct: 961 SIIKNEFSNVMPIRGARIPIIKFTGQYNIHCDLSFDNLLPIHNSDLILNY 1010
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 27.1 bits (57), Expect = 2.9
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 368 TTDPQEITSTLPTSTCRYR 424
TT P+E T+T+ T+TC R
Sbjct: 564 TTSPEETTTTMTTTTCSSR 582
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 26.6 bits (56), Expect = 3.8
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +1
Query: 505 ESESSLIVMLTVVSERWXAKCHQYWPKV-GTTPLXAT--NALTVLTNSEQNFGHYIRREM 675
E+ +I LT V++ + Q K+ T P+ NA TV N+ FG +IR E
Sbjct: 190 ETTKKVIQYLTSVTDASTSDSQQLEKKILETNPVLEAFGNAQTVRNNNSSRFGKFIRIEF 249
Query: 676 T 678
+
Sbjct: 250 S 250
>SPBPB2B2.06c |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 601
Score = 25.8 bits (54), Expect = 6.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 334 IAPYDATRVILNNGPTGDYINASYINMPIPNSDLVLT 444
+A +ATR + P + SY N+PIPN+ L T
Sbjct: 302 LAASNATRQYVGR-PVTNETRQSYPNLPIPNTPLYYT 337
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 25.8 bits (54), Expect = 6.6
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 480 G*FLANGLGIG--EQFDCHVNGCVRTMXGQVSPILAQSWNHTV 602
G FL+ GLG G + +D +RTM G + + SWN V
Sbjct: 233 GSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNRHV 275
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,491,663
Number of Sequences: 5004
Number of extensions: 45693
Number of successful extensions: 122
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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