Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0480
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.            115   2e-27
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    24   5.8  

>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score =  115 bits (276), Expect = 2e-27
 Identities = 66/157 (42%), Positives = 82/157 (52%), Gaps = 4/157 (2%)
 Frame = +1

Query: 292  SKLPHNINKNRYKDIAPYDATRVIL---NNGPTGDYINASYINMPIPNSDLVLTYIATQG 462
            S +  N  KNRY ++  YD +RVIL      P  DYINA+Y +    ++     Y+ATQG
Sbjct: 694  SNMEVNKPKNRYANVTSYDHSRVILPPIERVPGSDYINANYCDGYRKHN----AYVATQG 749

Query: 463  PLASTVGDFWQMVWESESSLIVMLTVVSERWXAKCHQYWPKVGTTPLXATNALTVLTNSE 642
            PL  T GDFW+M WE +SS IVM+T + ER   KC  YWP  GT       A+TV     
Sbjct: 750  PLQETFGDFWRMCWELKSSTIVMMTRLEERSRIKCTMYWPSRGT---EVYGAMTVTITET 806

Query: 643  QNFGHY-IRREMTLXEXSGASRNVTHLQYTXWPDHXV 750
            Q    Y IR        S   R +  LQ+T WPDH V
Sbjct: 807  QELATYSIRTFQLYRNGSNERREIKQLQFTAWPDHGV 843



 Score = 96.3 bits (229), Expect = 9e-22
 Identities = 59/157 (37%), Positives = 79/157 (50%), Gaps = 4/157 (2%)
 Frame = +1

Query: 292  SKLPHNINKNRYKDIAPYDATRVILN--NGPTG-DYINASYINMPIPNSDLVLTYIATQG 462
            + LP N +K R   I PY+++RV L    G  G DYINAS ++           YIA QG
Sbjct: 983  ANLPCNKHKTRVPHILPYESSRVCLTPIRGVEGSDYINASLVD----GYRYRKRYIAAQG 1038

Query: 463  PLASTVGDFWQMVWESESSLIVMLTVVSERWXAKCHQYWPKVGTTPLXATNALTVLTNSE 642
            PL  T  DFW+M+WE  S+++VMLT + E    KC QYWP   +          V   +E
Sbjct: 1039 PLQETAEDFWRMLWEHNSTIVVMLTKLKEMGREKCFQYWPHERSV---RYQCYVVDPIAE 1095

Query: 643  QNFGHYIRREMTLXE-XSGASRNVTHLQYTXWPDHXV 750
             N   Y  RE  + +   G+SR V   Q+  WP+  V
Sbjct: 1096 YNMPQYKLREFKVTDARDGSSRTVRQFQFITWPEQGV 1132


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 611 VAFNGVVPTLGQYW*HLAXHRSDTTVNMTIKLLSDS 504
           + F G+  T+  Y      H+S TT+   +K+LS S
Sbjct: 502 ITFCGI--TMKNYVEQNVSHKSHTTIKYALKMLSSS 535


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,748
Number of Sequences: 2352
Number of extensions: 12124
Number of successful extensions: 27
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)