Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0479
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    27   0.43 
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   2.3  
AY330183-1|AAQ16289.1|  190|Anopheles gambiae odorant-binding pr...    24   4.0  
AJ618925-1|CAF02004.1|  204|Anopheles gambiae odorant-binding pr...    24   4.0  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    23   7.0  

>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 27.5 bits (58), Expect = 0.43
 Identities = 15/61 (24%), Positives = 26/61 (42%)
 Frame = +2

Query: 302 WSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEXSQRPDDGELDGLKPPSSNVIFKCRT 481
           +SK   + S +P P    T +          S    QRP   +LD    P+++ +++C  
Sbjct: 237 YSKKSTTVSYQPVPTGTPTRMLNGEPASQRPSSSQMQRPKVQQLDTAAAPTNHHLYRCPA 296

Query: 482 C 484
           C
Sbjct: 297 C 297


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -2

Query: 189  SPFSTTSEGGGSTPWSISTSSAQE 118
            S FST+S G GS   S S SSA +
Sbjct: 1346 SKFSTSSRGSGSDSGSHSISSAAQ 1369


>AY330183-1|AAQ16289.1|  190|Anopheles gambiae odorant-binding
           protein AgamOBP57 protein.
          Length = 190

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +2

Query: 92  MPVAEEFQASWADEVEIDQGVLPPPSE 172
           +P+AE F     DEVE+  G   P  E
Sbjct: 107 VPLAEGFIQQCFDEVELTDGAFVPSDE 133


>AJ618925-1|CAF02004.1|  204|Anopheles gambiae odorant-binding
           protein OBP14426 protein.
          Length = 204

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +2

Query: 92  MPVAEEFQASWADEVEIDQGVLPPPSE 172
           +P+AE F     DEVE+  G   P  E
Sbjct: 121 VPLAEGFIQQCFDEVELTDGAFVPSDE 147


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 89  DMPVAEEFQASWADEVEIDQGVLPPPSEVVE 181
           D+ +A+  ++ WAD +  D  +  PP  + E
Sbjct: 287 DVLIADFSRSIWADSIVFDSIITDPPYGIRE 317


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 643,839
Number of Sequences: 2352
Number of extensions: 10698
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)