Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0479
(700 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U96074-1|AAC78728.1| 320|Homo sapiens translation initiation fa... 139 1e-32
CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein. 139 1e-32
BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation ... 139 1e-32
BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation ... 139 1e-32
BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation ... 139 1e-32
AF094850-1|AAG15419.1| 320|Homo sapiens eukaryotic translation ... 139 1e-32
AF092453-1|AAG15396.1| 320|Homo sapiens eukaryotic translation ... 139 1e-32
AF020833-1|AAB71866.1| 320|Homo sapiens eukaryotic translation ... 139 1e-32
BC001965-1|AAH01965.1| 910|Homo sapiens RAD54 homolog B (S. cer... 31 5.2
AL133578-1|CAB63724.1| 580|Homo sapiens hypothetical protein pr... 31 5.2
AF112481-1|AAD34331.1| 910|Homo sapiens RAD54B protein protein. 31 5.2
U03469-1|AAC52063.1| 477|Homo sapiens glucagon receptor protein. 30 9.1
L20316-1|AAA53628.1| 477|Homo sapiens glucagon receptor protein. 30 9.1
BX641102-1|CAE46047.1| 685|Homo sapiens hypothetical protein pr... 30 9.1
BX538046-1|CAD97985.1| 216|Homo sapiens hypothetical protein pr... 30 9.1
BC112041-1|AAI12042.1| 477|Homo sapiens glucagon receptor protein. 30 9.1
BC104854-1|AAI04855.1| 477|Homo sapiens glucagon receptor protein. 30 9.1
BC036844-1|AAH36844.1| 297|Homo sapiens SPTY2D1 protein protein. 30 9.1
AK096760-1|BAC04858.1| 627|Homo sapiens protein ( Homo sapiens ... 30 9.1
>U96074-1|AAC78728.1| 320|Homo sapiens translation initiation
factor eIF3 p44 subunit protein.
Length = 320
Score = 139 bits (336), Expect = 1e-32
Identities = 66/124 (53%), Positives = 80/124 (64%)
Frame = +2
Query: 155 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 334
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 335 PGPNPATTNVAEDVFMQFITSKEXSQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 514
PGPN ATT V++DV M FITSKE + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 515 FKHT 526
+K T
Sbjct: 171 YKDT 174
>CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein.
Length = 320
Score = 139 bits (336), Expect = 1e-32
Identities = 66/124 (53%), Positives = 80/124 (64%)
Frame = +2
Query: 155 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 334
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 335 PGPNPATTNVAEDVFMQFITSKEXSQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 514
PGPN ATT V++DV M FITSKE + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 515 FKHT 526
+K T
Sbjct: 171 YKDT 174
>BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 139 bits (336), Expect = 1e-32
Identities = 66/124 (53%), Positives = 80/124 (64%)
Frame = +2
Query: 155 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 334
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 335 PGPNPATTNVAEDVFMQFITSKEXSQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 514
PGPN ATT V++DV M FITSKE + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 515 FKHT 526
+K T
Sbjct: 171 YKDT 174
>BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 139 bits (336), Expect = 1e-32
Identities = 66/124 (53%), Positives = 80/124 (64%)
Frame = +2
Query: 155 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 334
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 335 PGPNPATTNVAEDVFMQFITSKEXSQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 514
PGPN ATT V++DV M FITSKE + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 515 FKHT 526
+K T
Sbjct: 171 YKDT 174
>BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 139 bits (336), Expect = 1e-32
Identities = 66/124 (53%), Positives = 80/124 (64%)
Frame = +2
Query: 155 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 334
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 335 PGPNPATTNVAEDVFMQFITSKEXSQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 514
PGPN ATT V++DV M FITSKE + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 515 FKHT 526
+K T
Sbjct: 171 YKDT 174
>AF094850-1|AAG15419.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit p42/p44 protein.
Length = 320
Score = 139 bits (336), Expect = 1e-32
Identities = 66/124 (53%), Positives = 80/124 (64%)
Frame = +2
Query: 155 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 334
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 335 PGPNPATTNVAEDVFMQFITSKEXSQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 514
PGPN ATT V++DV M FITSKE + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 515 FKHT 526
+K T
Sbjct: 171 YKDT 174
>AF092453-1|AAG15396.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit p42/p44 protein.
Length = 320
Score = 139 bits (336), Expect = 1e-32
Identities = 66/124 (53%), Positives = 80/124 (64%)
Frame = +2
Query: 155 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 334
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 335 PGPNPATTNVAEDVFMQFITSKEXSQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 514
PGPN ATT V++DV M FITSKE + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 515 FKHT 526
+K T
Sbjct: 171 YKDT 174
>AF020833-1|AAB71866.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit protein.
Length = 320
Score = 139 bits (336), Expect = 1e-32
Identities = 66/124 (53%), Positives = 80/124 (64%)
Frame = +2
Query: 155 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 334
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 335 PGPNPATTNVAEDVFMQFITSKEXSQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 514
PGPN ATT V++DV M FITSKE + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 515 FKHT 526
+K T
Sbjct: 171 YKDT 174
>BC001965-1|AAH01965.1| 910|Homo sapiens RAD54 homolog B (S.
cerevisiae) protein.
Length = 910
Score = 30.7 bits (66), Expect = 5.2
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 371 DVFMQFITSKEXSQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCPF 517
D +FI S++ P + + LKP S + + + + GDHL L PF
Sbjct: 840 DSLEKFIVSRDCQLGPHHQKSNSLKPLSMSQLKQWKHFSGDHLNLTDPF 888
>AL133578-1|CAB63724.1| 580|Homo sapiens hypothetical protein
protein.
Length = 580
Score = 30.7 bits (66), Expect = 5.2
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 371 DVFMQFITSKEXSQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCPF 517
D +FI S++ P + + LKP S + + + + GDHL L PF
Sbjct: 510 DSLEKFIVSRDCQLGPHHQKSNSLKPLSMSQLKQWKHFSGDHLNLTDPF 558
>AF112481-1|AAD34331.1| 910|Homo sapiens RAD54B protein protein.
Length = 910
Score = 30.7 bits (66), Expect = 5.2
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 371 DVFMQFITSKEXSQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCPF 517
D +FI S++ P + + LKP S + + + + GDHL L PF
Sbjct: 840 DSLEKFIVSRDCQLGPHHQKSNSLKPLSMSQLKQWKHFSGDHLNLTDPF 888
>U03469-1|AAC52063.1| 477|Homo sapiens glucagon receptor protein.
Length = 477
Score = 29.9 bits (64), Expect = 9.1
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -1
Query: 523 VLEWTI-QCQMVSLTCTTLKDNIAGWWLKTIKLPVIWAL 410
V+ W + +C ++ C T DN+ WW+ ++ PV A+
Sbjct: 279 VVPWAVVKCLFENVQCWTSNDNMGFWWI--LRFPVFLAI 315
>L20316-1|AAA53628.1| 477|Homo sapiens glucagon receptor protein.
Length = 477
Score = 29.9 bits (64), Expect = 9.1
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -1
Query: 523 VLEWTI-QCQMVSLTCTTLKDNIAGWWLKTIKLPVIWAL 410
V+ W + +C ++ C T DN+ WW+ ++ PV A+
Sbjct: 279 VVPWAVVKCLFENVQCWTSNDNMGFWWI--LRFPVFLAI 315
>BX641102-1|CAE46047.1| 685|Homo sapiens hypothetical protein
protein.
Length = 685
Score = 29.9 bits (64), Expect = 9.1
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +2
Query: 266 RVVSKSIAKRKTWSKFGDSASDKPGPN--PATTNVAEDVFMQFITSKEXSQRPDDGELDG 439
R VS S+ R S GP P T V+E I+SK R +G+++G
Sbjct: 504 RTVSNSVPGRPVSSLGPGQTVSSSGPTIKPKCTVVSET-----ISSKNIISRSSNGQMNG 558
Query: 440 LKPPSS 457
+KPP S
Sbjct: 559 MKPPLS 564
>BX538046-1|CAD97985.1| 216|Homo sapiens hypothetical protein
protein.
Length = 216
Score = 29.9 bits (64), Expect = 9.1
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +2
Query: 266 RVVSKSIAKRKTWSKFGDSASDKPGPN--PATTNVAEDVFMQFITSKEXSQRPDDGELDG 439
R VS S+ R S GP P T V+E I+SK R +G+++G
Sbjct: 35 RTVSNSVPGRPVSSLGPGQTVSSSGPTIKPKCTVVSET-----ISSKNIISRSSNGQMNG 89
Query: 440 LKPPSS 457
+KPP S
Sbjct: 90 MKPPLS 95
>BC112041-1|AAI12042.1| 477|Homo sapiens glucagon receptor protein.
Length = 477
Score = 29.9 bits (64), Expect = 9.1
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -1
Query: 523 VLEWTI-QCQMVSLTCTTLKDNIAGWWLKTIKLPVIWAL 410
V+ W + +C ++ C T DN+ WW+ ++ PV A+
Sbjct: 279 VVPWAVVKCLFENVQCWTSNDNMGFWWI--LRFPVFLAI 315
>BC104854-1|AAI04855.1| 477|Homo sapiens glucagon receptor protein.
Length = 477
Score = 29.9 bits (64), Expect = 9.1
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -1
Query: 523 VLEWTI-QCQMVSLTCTTLKDNIAGWWLKTIKLPVIWAL 410
V+ W + +C ++ C T DN+ WW+ ++ PV A+
Sbjct: 279 VVPWAVVKCLFENVQCWTSNDNMGFWWI--LRFPVFLAI 315
>BC036844-1|AAH36844.1| 297|Homo sapiens SPTY2D1 protein protein.
Length = 297
Score = 29.9 bits (64), Expect = 9.1
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +2
Query: 266 RVVSKSIAKRKTWSKFGDSASDKPGPN--PATTNVAEDVFMQFITSKEXSQRPDDGELDG 439
R VS S+ R S GP P T V+E I+SK R +G+++G
Sbjct: 116 RTVSNSVPGRPVSSLGPGQTVSSSGPTIKPKCTVVSET-----ISSKNIISRSSNGQMNG 170
Query: 440 LKPPSS 457
+KPP S
Sbjct: 171 MKPPLS 176
>AK096760-1|BAC04858.1| 627|Homo sapiens protein ( Homo sapiens
cDNA FLJ39441 fis, clone PROST2005793. ).
Length = 627
Score = 29.9 bits (64), Expect = 9.1
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +2
Query: 266 RVVSKSIAKRKTWSKFGDSASDKPGPN--PATTNVAEDVFMQFITSKEXSQRPDDGELDG 439
R VS S+ R S GP P T V+E I+SK R +G+++G
Sbjct: 504 RTVSNSVPGRPVSSLGPGQTVSSSGPTIKPKCTVVSET-----ISSKNIISRSSNGQMNG 558
Query: 440 LKPPSS 457
+KPP S
Sbjct: 559 MKPPLS 564
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,184,031
Number of Sequences: 237096
Number of extensions: 1618813
Number of successful extensions: 4154
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4146
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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