Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0479
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118933-1|AAM50793.1|  269|Drosophila melanogaster LD24347p pro...   182   5e-46
AE014298-421|AAF45796.1|  269|Drosophila melanogaster CG8636-PA ...   182   5e-46
AE014297-2789|AAF55764.1|  273|Drosophila melanogaster CG10881-P...   156   3e-38
AY060809-1|AAL28357.1| 1272|Drosophila melanogaster GH27809p pro...    29   8.0  
AE013599-3941|AAF47260.2| 1272|Drosophila melanogaster CG30421-P...    29   8.0  

>AY118933-1|AAM50793.1|  269|Drosophila melanogaster LD24347p
           protein.
          Length = 269

 Score =  182 bits (442), Expect = 5e-46
 Identities = 99/206 (48%), Positives = 126/206 (61%), Gaps = 7/206 (3%)
 Frame = +2

Query: 92  MPVAEEFQASWADEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRV 271
           MP  E  ++SWADEVE+D G LPP +E VENG K VTEYKY+ D+KK K+VRTYKI K+V
Sbjct: 1   MPGVETIKSSWADEVELDYGGLPPTTETVENGQKYVTEYKYNKDDKKTKVVRTYKISKQV 60

Query: 272 VSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEXSQRPDDGELDGLKPP 451
           V K++AKR+TW+KFGDS +DKPGPN  TT V+E++ MQF+ SKE     D+   D L  P
Sbjct: 61  VPKTVAKRRTWTKFGDSKNDKPGPNSQTTMVSEEIIMQFLNSKE-----DEKANDPLLDP 115

Query: 452 SSNVIFKCRTCQGDHLTLYCPFKHTQI---XXXXXXXXXXXXXXXXXXSNKYIPP----S 610
           + N I KCR C G+H ++ CP+K T +                     S KY+PP    S
Sbjct: 116 TKN-IAKCRICNGEHWSVNCPYKGTAMDTNMMEKKASAAAAAAVDAPKSGKYVPPFLKDS 174

Query: 611 SAGRIPGRDQPPVRREXVTAIRISNL 688
             G +  R      R+   AIRISNL
Sbjct: 175 QKGALGMRG-----RDDTAAIRISNL 195


>AE014298-421|AAF45796.1|  269|Drosophila melanogaster CG8636-PA
           protein.
          Length = 269

 Score =  182 bits (442), Expect = 5e-46
 Identities = 99/206 (48%), Positives = 126/206 (61%), Gaps = 7/206 (3%)
 Frame = +2

Query: 92  MPVAEEFQASWADEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRV 271
           MP  E  ++SWADEVE+D G LPP +E VENG K VTEYKY+ D+KK K+VRTYKI K+V
Sbjct: 1   MPGVETIKSSWADEVELDYGGLPPTTETVENGQKYVTEYKYNKDDKKTKVVRTYKISKQV 60

Query: 272 VSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEXSQRPDDGELDGLKPP 451
           V K++AKR+TW+KFGDS +DKPGPN  TT V+E++ MQF+ SKE     D+   D L  P
Sbjct: 61  VPKTVAKRRTWTKFGDSKNDKPGPNSQTTMVSEEIIMQFLNSKE-----DEKANDPLLDP 115

Query: 452 SSNVIFKCRTCQGDHLTLYCPFKHTQI---XXXXXXXXXXXXXXXXXXSNKYIPP----S 610
           + N I KCR C G+H ++ CP+K T +                     S KY+PP    S
Sbjct: 116 TKN-IAKCRICNGEHWSVNCPYKGTAMDTNMMEKKASAAAAAAVDAPKSGKYVPPFLKDS 174

Query: 611 SAGRIPGRDQPPVRREXVTAIRISNL 688
             G +  R      R+   AIRISNL
Sbjct: 175 QKGALGMRG-----RDDTAAIRISNL 195


>AE014297-2789|AAF55764.1|  273|Drosophila melanogaster CG10881-PA
           protein.
          Length = 273

 Score =  156 bits (378), Expect = 3e-38
 Identities = 89/203 (43%), Positives = 122/203 (60%), Gaps = 10/203 (4%)
 Frame = +2

Query: 110 FQASWADEVEIDQ-GVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSI 286
           F  SWADEV+ D    LPP +E ++   K VTEYK+++D KKVK+VRT+KIEK++V K++
Sbjct: 4   FVTSWADEVDADYVDGLPPSNEYIKGDFKYVTEYKFNDDGKKVKVVRTFKIEKQIVPKAV 63

Query: 287 AKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEXSQRPDDGELDGLKPPSSNVI 466
           A+R+ W KFGDS SDKPGPN  TT  +E++FMQFI SK+  Q   + +LD    P  N I
Sbjct: 64  ARRRNWVKFGDSRSDKPGPNSQTTMASEEIFMQFIGSKDFDQ-THETQLD----PGKN-I 117

Query: 467 FKCRTCQGDHLTLYCPFKHTQIXXXXXXXXXXXXXXXXXXSN-----KYIPP--SSAGRI 625
            KCR C G+H ++ CP+K T +                  S+     KY+PP     G I
Sbjct: 118 AKCRICNGEHWSVNCPYKGTSMDSKTVMETKANAAAAAAISDPSKTGKYVPPFMKDGGGI 177

Query: 626 PG-RDQPPVR-REXVTAIRISNL 688
            G ++    R R+  +A+RISNL
Sbjct: 178 SGSKNWGRGRDRDDSSAVRISNL 200


>AY060809-1|AAL28357.1| 1272|Drosophila melanogaster GH27809p
           protein.
          Length = 1272

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -3

Query: 227 CYHCRIYIP*QFLVHFQPLQKVVEVHLGQSRPHQPRKPE 111
           C HC+ Y+P    +    L  ++ VH  + R HQ + P+
Sbjct: 745 CPHCQQYLPVVKTLGLWSLPDILVVHFKRFRQHQSKGPQ 783


>AE013599-3941|AAF47260.2| 1272|Drosophila melanogaster CG30421-PA
           protein.
          Length = 1272

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -3

Query: 227 CYHCRIYIP*QFLVHFQPLQKVVEVHLGQSRPHQPRKPE 111
           C HC+ Y+P    +    L  ++ VH  + R HQ + P+
Sbjct: 745 CPHCQQYLPVVKTLGLWSLPDILVVHFKRFRQHQSKGPQ 783


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,699,603
Number of Sequences: 53049
Number of extensions: 512807
Number of successful extensions: 1887
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1883
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)