Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0478
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       25   2.5  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   3.3  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   7.6  

>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 8/27 (29%), Positives = 19/27 (70%)
 Frame = +2

Query: 89  FPNESEKNGKCSSAEYKLEGDVVKVKN 169
           + ++ E++   ++AE+ L+ DV++V N
Sbjct: 170 YDDDDEEDAAAAAAEFPLQKDVIRVTN 196


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 59  KLSS*SCSPVSDRGRCFVP 3
           + S  +CSP   +GRCF P
Sbjct: 178 RFSKLNCSPQCSQGRCFGP 196


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +1

Query: 136  QTGR*RGEGQERAYHRRRQEVYRRDGQAHRRCQ*SRKANSHF 261
            Q GR     +E    RRR+E+ R   Q  RR + S+    HF
Sbjct: 1178 QNGRAVSSAEE--LERRRREMERTRRQRQRRARDSQAITIHF 1217


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 685,439
Number of Sequences: 2352
Number of extensions: 11633
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)