Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0477
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.65 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.6  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   2.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
 Frame = +3

Query: 126 KCYYLV*FXQFY-FSDNHKVHTAFMVI*NFLVCKSINVRHPHCRL*M*NLKSNVYFYYTF 302
           KCY L     FY  S    VH  F++   +     +    P     +  L    YFYY F
Sbjct: 49  KCYNLRRIYYFYCVSITFNVHLLFLLCSGYFTVHLL-FYCPFIIFTVHFLLCTYYFYYAF 107

Query: 303 ICNLFAIFYY 332
           I  L   ++Y
Sbjct: 108 IILLCVYYFY 117


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 282 VYFYYTFICNLFAIFYY 332
           V F+++F C LF I+ Y
Sbjct: 9   VLFFFSFCCILFFIYLY 25


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/35 (25%), Positives = 15/35 (42%)
 Frame = +3

Query: 300  FICNLFAIFYYLVRKKICIFLINYHYINRNLAGXG 404
            F C  + + YY+    + + L+ Y   N N    G
Sbjct: 999  FNCLKYGVIYYVTVPSMYLLLVIYSVFNMNNVSWG 1033


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/35 (25%), Positives = 15/35 (42%)
 Frame = +3

Query: 300  FICNLFAIFYYLVRKKICIFLINYHYINRNLAGXG 404
            F C  + + YY+    + + L+ Y   N N    G
Sbjct: 999  FNCLKYGVIYYVTVPSMYLLLVIYSVFNMNNVSWG 1033


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 472 SLRKNVKHIKLVL*FFK 522
           S  +N  HIK+VL FFK
Sbjct: 55  SFHRNEIHIKIVLMFFK 71


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,405
Number of Sequences: 336
Number of extensions: 3784
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)