Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0472
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77669-5|CAK12563.1|  976|Caenorhabditis elegans Hypothetical pr...    40   0.002
Z77669-4|CAB01242.1|  988|Caenorhabditis elegans Hypothetical pr...    40   0.002
Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical pr...    38   0.008
AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical ...    32   0.50 
Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical pr...    29   4.7  

>Z77669-5|CAK12563.1|  976|Caenorhabditis elegans Hypothetical
           protein T07F10.1b protein.
          Length = 976

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 19/53 (35%), Positives = 29/53 (54%)
 Frame = +3

Query: 78  SSCRSEXRTQIPSITRAKLLHDAWNLAYAGELXFXTALNMTLFLKTEEDHLVW 236
           S    E   Q    TR +L+ D++ LA AG L +   LN+  +LK E+++L W
Sbjct: 643 SEMLKENHEQFSPQTRVRLIDDSFALARAGLLSYSIPLNLITYLKNEKEYLPW 695


>Z77669-4|CAB01242.1|  988|Caenorhabditis elegans Hypothetical
           protein T07F10.1a protein.
          Length = 988

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 19/53 (35%), Positives = 29/53 (54%)
 Frame = +3

Query: 78  SSCRSEXRTQIPSITRAKLLHDAWNLAYAGELXFXTALNMTLFLKTEEDHLVW 236
           S    E   Q    TR +L+ D++ LA AG L +   LN+  +LK E+++L W
Sbjct: 655 SEMLKENHEQFSPQTRVRLIDDSFALARAGLLSYSIPLNLITYLKNEKEYLPW 707


>Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical
           protein AC3.5 protein.
          Length = 1090

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = +3

Query: 120 TRAKLLHDAWNLAYAGELXFXTALNMTLFLKTEEDHLVW 236
           TRA+L+ D + LA +G L F TALN+T +L  E   + W
Sbjct: 765 TRARLISDVFALANSGALPFETALNVTSYLPMETATVPW 803


>AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical
           protein Y42A5A.1 protein.
          Length = 1045

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 14/53 (26%), Positives = 29/53 (54%)
 Frame = +3

Query: 102 TQIPSITRAKLLHDAWNLAYAGELXFXTALNMTLFLKTEEDHLVWEAXFPMLD 260
           T IP+ +R++L+ D   +A  G+L +    N+T+++  E  +  ++     LD
Sbjct: 719 TMIPTNSRSRLIDDTLAMAENGQLTYKVPFNLTMYMSREIAYRPFQTFSAYLD 771


>Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical protein
            T16G12.1 protein.
          Length = 1890

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +3

Query: 114  SITRAKLLHDAWNLAYAGELXFXTALNMTLFLKTEEDHLVWE 239
            S TRA LL DA     +G       L++TL+L  E+    WE
Sbjct: 1574 STTRAMLLDDANFFYQSGRWEMTKFLDLTLYLVNEDSLAPWE 1615


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,248,894
Number of Sequences: 27780
Number of extensions: 250898
Number of successful extensions: 387
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 387
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)