Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0471
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.       31   0.029
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    26   1.1  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    26   1.1  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   7.6  

>DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.
          Length = 409

 Score = 31.5 bits (68), Expect = 0.029
 Identities = 20/60 (33%), Positives = 29/60 (48%)
 Frame = -2

Query: 398 RHVXLDVPRQMLDTLVHPKS*CQAHGHNAS*AHRTLAATSVGFSRFLCRLRRRGTAXSPA 219
           RH+  D PR  +DTL   +S   +   N        AAT+ G  +F   ++R G + SPA
Sbjct: 119 RHMSGDFPRDYVDTLKQLRSPLLSISRNRYRHECNSAATTYGTMQFAQGVKRSGGSQSPA 178


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +2

Query: 236 FLDDGVYRGTVKIQLKWLQESDELSLHCDHELGISFWD 349
           ++  G+++ T KI + W    D+   HC+ + G   +D
Sbjct: 138 YVPPGIFKSTCKIDITWFPFDDQ---HCEMKFGSWTYD 172


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +2

Query: 236 FLDDGVYRGTVKIQLKWLQESDELSLHCDHELGISFWD 349
           ++  G+++ T KI + W    D+   HC+ + G   +D
Sbjct: 138 YVPPGIFKSTCKIDITWFPFDDQ---HCEMKFGSWTYD 172


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -2

Query: 416 YEAPSQRHVXLDVPRQMLDTLVHPKS*CQA 327
           ++ P  RH  +  P ++L  L  P+  CQ+
Sbjct: 460 FKTPPYRHKDITEPVEVLMQLFRPRDRCQS 489


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,418
Number of Sequences: 2352
Number of extensions: 11786
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)