BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0470
(750 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 28 0.11
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 27 0.25
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 25 0.57
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 24 1.3
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 24 1.3
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 23 2.3
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 23 2.3
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 23 2.3
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 23 2.3
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 23 3.1
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 23 3.1
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 23 3.1
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 3.1
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 3.1
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 3.1
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 3.1
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 3.1
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 3.1
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 23 3.1
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 3.1
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 3.1
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 23 3.1
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 3.1
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 3.1
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 3.1
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 3.1
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 3.1
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 22 5.3
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 5.3
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 22 5.3
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 9.3
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 9.3
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 27.9 bits (59), Expect = 0.11
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = -1
Query: 345 SLLRGDTVDCESALNIID*TKQFISLLN*DNIHKSSRIS 229
SLL+ +TV C+ A++++ + +++ DNIH IS
Sbjct: 381 SLLKENTVTCQEAMHMLKNADSQLLVISDDNIHIKGVIS 419
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 26.6 bits (56), Expect = 0.25
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 584 RDIPAPSTLCTSRTPRDTPSPRG*TTCS*FGKGTK 688
RD+P ST T+ RDT +P G+G+K
Sbjct: 137 RDLPGKSTTTTAEVKRDTINPEDVILIRRTGEGSK 171
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.4 bits (53), Expect = 0.57
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 584 RDIPAPSTLCTSRTPRDTPSPRG*TTCS*FGKGTK 688
RD+P ST T RDT +P G+G+K
Sbjct: 137 RDLPGKSTTTTVEVKRDTINPEDVILIRRTGEGSK 171
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 24.2 bits (50), Expect = 1.3
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 584 RDIPAPSTLCTSRTPRDTPSPRG*TTCS*FGKGTK 688
RD+P ST+ T RD +P G+G+K
Sbjct: 126 RDLPGKSTITTVEVKRDIINPEDVILIRRTGEGSK 160
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.2 bits (50), Expect = 1.3
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 584 RDIPAPSTLCTSRTPRDTPSPRG*TTCS*FGKGTK 688
RD+P ST+ T RD +P G+G+K
Sbjct: 137 RDLPGKSTITTVEVKRDIINPEDVILIRRTGEGSK 171
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.4 bits (48), Expect = 2.3
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 584 RDIPAPSTLCTSRTPRDTPSPRG*TTCS*FGKGTK 688
RD+P ST T RD +P G+G+K
Sbjct: 126 RDLPGKSTTTTVEVKRDIINPEDVIVIRRTGEGSK 160
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 2.3
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 584 RDIPAPSTLCTSRTPRDTPSPRG*TTCS*FGKGTK 688
RD+P ST T RD +P G+G+K
Sbjct: 137 RDLPGKSTTTTVEVKRDIINPEDVIVIRRTGEGSK 171
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 2.3
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 584 RDIPAPSTLCTSRTPRDTPSPRG*TTCS*FGKGTK 688
RD+P ST T RD +P G+G+K
Sbjct: 137 RDLPGKSTTTTVEVKRDIINPEDVIVIRRTGEGSK 171
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.4 bits (48), Expect = 2.3
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 584 RDIPAPSTLCTSRTPRDTPSPRG*TTCS*FGKGTK 688
RD+P ST T RD +P G+G+K
Sbjct: 126 RDLPGKSTTTTVEVKRDIINPEDVIVIRRTGEGSK 160
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -1
Query: 387 RSGRHTLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 268
R G+ + T L+ ++L + CE +NI K ++SL
Sbjct: 75 RYGQSAVGLTFLLGAILVQVAIICEGVMNIQKDNKSYLSL 114
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 584 RDIPAPSTLCTSRTPRDTPSPRG*TTCS*FGKGTK 688
RD+P ST T RD +P G+G+K
Sbjct: 137 RDLPGKSTTTTVEVKRDIINPEDVILIRRTGEGSK 171
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 584 RDIPAPSTLCTSRTPRDTPSPRG*TTCS*FGKGTK 688
RD+P ST T RD +P G+G+K
Sbjct: 137 RDLPGKSTTTTVEVKRDIINPEDVILIRRTGEGSK 171
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 584 RDIPAPSTLCTSRTPRDTPSPRG*TTCS*FGKGTK 688
RD+P ST T RD +P G+G+K
Sbjct: 137 RDLPGKSTTTTVEVKRDIINPEDVILIRRTGEGSK 171
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 584 RDIPAPSTLCTSRTPRDTPSPRG*TTCS*FGKGTK 688
RD+P ST T RD +P G+G+K
Sbjct: 137 RDLPGKSTTTTVEVKRDIINPEDVILIRRTGEGSK 171
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 584 RDIPAPSTLCTSRTPRDTPSPRG*TTCS*FGKGTK 688
RD+P ST T RD +P G+G+K
Sbjct: 126 RDLPGKSTTTTVEVKRDIINPEDVILIRRTGEGSK 160
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 584 RDIPAPSTLCTSRTPRDTPSPRG*TTCS*FGKGTK 688
RD+P ST T RD +P G+G+K
Sbjct: 137 RDLPGKSTTTTVEVKRDIINPEDVIPIRRTGEGSK 171
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 584 RDIPAPSTLCTSRTPRDTPSPRG*TTCS*FGKGTK 688
RD+P ST T RD +P G+G+K
Sbjct: 137 RDLPGKSTTTTVEVKRDIINPEDVILIRRTGEGSK 171
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 584 RDIPAPSTLCTSRTPRDTPSPRG*TTCS*FGKGTK 688
RD+P ST T RD +P G+G+K
Sbjct: 137 RDLPGKSTTTTVEVKRDIINPEDVILIRRTGEGSK 171
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 584 RDIPAPSTLCTSRTPRDTPSPRG*TTCS*FGKGTK 688
RD+P ST T RD +P G+G+K
Sbjct: 137 RDLPGKSTTTTVEVKRDIINPEDVILIRRTGEGSK 171
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 584 RDIPAPSTLCTSRTPRDTPSPRG*TTCS*FGKGTK 688
RD+P ST T RD +P G+G+K
Sbjct: 137 RDLPGKSTTTTVEVKRDIINPEDVILIRRTGEGSK 171
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 584 RDIPAPSTLCTSRTPRDTPSPRG*TTCS*FGKGTK 688
RD+P ST T RD +P G+G+K
Sbjct: 137 RDLPGKSTTTTVEVKRDIINPEDVILIRRTGEGSK 171
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 584 RDIPAPSTLCTSRTPRDTPSPRG*TTCS*FGKGTK 688
RD+P ST T RD +P G+G+K
Sbjct: 126 RDLPGKSTTTTVEVKRDIINPEDVILIRRTGEGSK 160
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 584 RDIPAPSTLCTSRTPRDTPSPRG*TTCS*FGKGTK 688
RD+P ST T RD +P G+G+K
Sbjct: 142 RDLPGKSTTTTVEVKRDIINPEDVILIRRTGEGSK 176
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 584 RDIPAPSTLCTSRTPRDTPSPRG*TTCS*FGKGTK 688
RD+P ST T RD +P G+G+K
Sbjct: 137 RDLPGKSTTTTVEVKRDIINPEDVILIRRTGEGSK 171
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 584 RDIPAPSTLCTSRTPRDTPSPRG*TTCS*FGKGTK 688
RD+P ST T RD +P G+G+K
Sbjct: 137 RDLPGKSTTTTVEVKRDIINPEDVILIRRTGEGSK 171
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 584 RDIPAPSTLCTSRTPRDTPSPRG*TTCS*FGKGTK 688
RD+P ST T RD +P G+G+K
Sbjct: 137 RDLPGKSTTTTVEVKRDIINPEDVILIRRTGEGSK 171
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 584 RDIPAPSTLCTSRTPRDTPSPRG*TTCS*FGKGTK 688
RD+P ST T RD +P G+G+K
Sbjct: 137 RDLPGKSTTTTVEVKRDIINPEDVILIRRTGEGSK 171
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 618 DVHNVEGAGMSLAGHD 571
DVH V GAG + HD
Sbjct: 110 DVHGVIGAGHWIGDHD 125
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.2 bits (45), Expect = 5.3
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +1
Query: 139 RLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 240
R K+ LTG L K RL+ + P +P+
Sbjct: 182 RTKHRLTGETRLSATKGRLVITEPVGSVRPKFPS 215
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 22.2 bits (45), Expect = 5.3
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -2
Query: 149 YFRRFLRKITRGKHSRNLWGPVDGLGAYTPPSLS 48
Y R +R T +H ++ +DG+G Y S S
Sbjct: 83 YNRMDMRNATYYQHQQDHGSGMDGMGGYRSASPS 116
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 9.3
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +2
Query: 584 RDIPAPSTLCTSRTPRDTPSPRG*TTCS*FGKGTK 688
RD+P ST + RD +P G+G+K
Sbjct: 126 RDLPGKSTTTSVEVKRDIINPEDVILIRRTGEGSK 160
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.4 bits (43), Expect = 9.3
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -3
Query: 439 LGSGWCGHHALPSTEHS*VRSPH 371
+G G HA P HS +PH
Sbjct: 419 MGHGHSHIHATPHHHHSHAATPH 441
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,122
Number of Sequences: 438
Number of extensions: 4926
Number of successful extensions: 37
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -