Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0469
(750 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 317 9e-88
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 87 2e-18
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 87 3e-18
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 82 7e-17
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 81 2e-16
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 64 2e-11
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 61 2e-10
SPBC16H5.13 |||WD repeat protein |Schizosaccharomyces pombe|chr ... 29 0.71
SPBC18E5.02c ||SPBC29A3.20c|serine palmitoyltransferase complex ... 28 1.2
SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomy... 28 1.6
SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4 |S... 27 2.9
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 27 3.8
SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr 2|... 27 3.8
SPAC4G9.11c |cmb1||cytosine-mismatch binding protein 1|Schizosac... 26 5.0
SPCC970.02 |||mannan endo-1,6-alpha-mannosidase|Schizosaccharomy... 26 5.0
SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr ... 26 6.6
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa... 26 6.6
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 25 8.7
SPAC57A10.06 |mug15||sequence orphan|Schizosaccharomyces pombe|c... 25 8.7
SPBC1683.13c |||transcription factor |Schizosaccharomyces pombe|... 25 8.7
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 317 bits (779), Expect = 9e-88
Identities = 146/250 (58%), Positives = 197/250 (78%), Gaps = 1/250 (0%)
Frame = +3
Query: 3 DIFISEGLHPRIITEGFDIARNKSLEVLESMKISIEIARENLVDVARTSLKTKVHPSLAD 182
+++I EGLHP +I++GF++A+N++L L+S K E+ RE L++VA+TSL TK+ + +
Sbjct: 105 ELYIREGLHPSLISDGFNLAKNEALTFLDSFKTDFEVDREVLLNVAKTSLSTKISSKVVE 164
Query: 183 VLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRVE 362
L A VDA+LTIR P +P+DLHMVEIM+M++++A++T L++GL++DHGARHPDMPK+V+
Sbjct: 165 SLAPAVVDAILTIRRPDEPIDLHMVEIMKMQNRSASDTQLIRGLLLDHGARHPDMPKQVK 224
Query: 363 NAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKKKLCD-GT 539
NAYIL NVSLEYEK+E+NSGFFY ++E RE+LV +ER+F+D ++RKIV LKK++C+
Sbjct: 225 NAYILILNVSLEYEKSEINSGFFYSTSEQRERLVESERKFVDNKLRKIVELKKEVCERDP 284
Query: 540 DKTFVVINQKGIDPLSLDAFAKEXIIGLRRAKRRNMERLALTCGGSAVNSVDDLTENALS 719
FV+INQKGIDPLSLD AK I+ LRRAKRRNMERL L CGG A NSVDDL L
Sbjct: 285 TANFVIINQKGIDPLSLDVLAKNGIMALRRAKRRNMERLQLACGGVAQNSVDDLNPEVLG 344
Query: 720 FAGLXYEHVL 749
+AG YE L
Sbjct: 345 WAGSVYERTL 354
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 87.4 bits (207), Expect = 2e-18
Identities = 66/250 (26%), Positives = 115/250 (46%), Gaps = 4/250 (1%)
Frame = +3
Query: 3 DIFISEGLHPRIITEGFDIARNKSLEVLESMKISIEIARENLVDV---ARTSLKTKVHPS 173
+ I +G+HP I +G++ A +++ L+++ ++ + EN ++ A+TSL +KV
Sbjct: 123 EALIDKGIHPIRIADGYEKACQVAVKHLDAISDVVDFSPENTTNLFRSAKTSLGSKVVSK 182
Query: 174 LADVLTDACVDAVLTIRT-PGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMP 350
D + VDAVL++ K VD ++++ + +T LVKG+V+D HP MP
Sbjct: 183 AHDHFANIAVDAVLSVADLQRKDVDFELIKVDGKVGGSVDDTKLVKGVVVDKDMSHPQMP 242
Query: 351 KRVENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKKKLC 530
R+ENA I E K + S + E L A E+E + ++ + L
Sbjct: 243 HRIENAKIAILTCPFEPPKPKTKHKLDITSVSEFEALQAYEKEKFQEMIKHVKDAGANL- 301
Query: 531 DGTDKTFVVINQKGIDPLSLDAFAKEXIIGLRRAKRRNMERLALTCGGSAVNSVDDLTEN 710
VI Q G D + + + +R +E +A+ G V +DL+ +
Sbjct: 302 --------VICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATNGRIVPRFEDLSSD 353
Query: 711 ALSFAGLXYE 740
L AG+ E
Sbjct: 354 KLGSAGIVRE 363
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 86.6 bits (205), Expect = 3e-18
Identities = 60/236 (25%), Positives = 123/236 (52%), Gaps = 6/236 (2%)
Frame = +3
Query: 12 ISEGLHPRIITEGFDIARNKSLEVL-ESMKISIE-IARENLVDVARTSLKTKVHPSLADV 185
+ +HP I G+ +A ++++ + + + S++ + +E+L++VA+TS+ +K+ + +D
Sbjct: 113 VKNKIHPTTIITGYRLAIREAVKFMTDVLSCSVDSLGKESLINVAKTSMSSKIIGNDSDF 172
Query: 186 LTDACVDAVLTIRTPGKPVD----LHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPK 353
+ VDA+L+++T + + V I++ K++ E+VLVKG ++ M
Sbjct: 173 FSTMAVDAMLSVKTSNSKGETRYPVKAVNILKAHGKSSRESVLVKGYALNCTIASQAMKT 232
Query: 354 RVENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKKKLCD 533
RV+NA I ++ L+ K + + EK+ E +RV+KI L
Sbjct: 233 RVQNAKIAVLDMDLQKTKMALGVHVTIDDPDQLEKIREREVMITLERVKKI------LNA 286
Query: 534 GTDKTFVVINQKGIDPLSLDAFAKEXIIGLRRAKRRNMERLALTCGGSAVNSVDDL 701
G + V++ KGID L L + + + +RR K+ ++ R+A G + ++S+ +L
Sbjct: 287 GAN---VILTTKGIDDLCLKSIIEAGAMAVRRCKKEDLRRIAKASGATLLSSLSNL 339
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 82.2 bits (194), Expect = 7e-17
Identities = 56/244 (22%), Positives = 113/244 (46%), Gaps = 6/244 (2%)
Frame = +3
Query: 24 LHPRIITEGFDIARNKSLEVLESMKISIEIA-RENLVDVARTSLKTKVHPSLADVLTDAC 200
+HP ++ F A +L +++ + + + + + + RT + TK+ +D++
Sbjct: 115 IHPVVMIRSFKQALEDALSIIDEITLPVNVDDNAEMFRLIRTCIGTKLVARWSDLMCHLA 174
Query: 201 VDAVLTIRTPGK---PVDL-HMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRVENA 368
+ AV T+ + +D+ + ++ + ++ G++++ HP M +R+EN
Sbjct: 175 LRAVRTVASTSNGRMEIDIKRYARVEKVPGGEIESSCVLDGVMLNKDVTHPKMRRRIENP 234
Query: 369 YILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKKKLCDGTDKT 548
I+ + LEY K E + D +++ E E + + I+A+K L
Sbjct: 235 RIVLLDCPLEYRKGESQTNIEISKDTDWNRILEIEEEQVKRMCDYIIAVKPDL------- 287
Query: 549 FVVINQKGIDPLSLDAFAKEXIIGLRRAKRRNMERLALTCGGSAVNSVDDLTENAL-SFA 725
VI +KG+ L+ K I LRR ++ + R+A CG + VN ++DL E + +
Sbjct: 288 --VITEKGVSDLAQHYLLKANITALRRTRKSDNNRIARACGANIVNRLEDLREKDVGTGC 345
Query: 726 GLXY 737
GL Y
Sbjct: 346 GLFY 349
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 80.6 bits (190), Expect = 2e-16
Identities = 61/247 (24%), Positives = 115/247 (46%), Gaps = 4/247 (1%)
Frame = +3
Query: 12 ISEGLHPRIITEGFDIARNKSLEVLESMKISIEIA-RENLVDVARTSLKTKVHPSLADVL 188
+ +G+HP +I E F A +++ ++ ++IE++ RE+L+ A TSL +K+ +++L
Sbjct: 111 LKKGIHPTVIAESFQRAAGFTVDCMKENALAIELSDRESLLRAATTSLNSKIVSQYSNLL 170
Query: 189 TDACVDAVLTIRTP--GKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGA-RHPDMPKRV 359
VDAVL + P VDL + I++ +T L+ GL + A + P R+
Sbjct: 171 APIAVDAVLKVIDPRVATNVDLKDIRIVKKLGGIIDDTELIPGLALTQTAVKSAGGPTRI 230
Query: 360 ENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKKKLCDGT 539
E A I L K ++ + +K++ ER+++ +KI KK
Sbjct: 231 EKANIALIQFQLSPPKPDMENQVVVNDYRQMDKILKEERQYLLNMCKKI----KKAGANV 286
Query: 540 DKTFVVINQKGIDPLSLDAFAKEXIIGLRRAKRRNMERLALTCGGSAVNSVDDLTENALS 719
I + ++ L+L AK I+ ++ +R +E + + G + ++ E+ L
Sbjct: 287 ILIQKSILRDAVNDLALHFLAKLKIMVIKDIERDEVEFICKSTGCKPIADIESFAEDKLG 346
Query: 720 FAGLXYE 740
A L E
Sbjct: 347 HADLVEE 353
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 64.5 bits (150), Expect = 2e-11
Identities = 59/236 (25%), Positives = 114/236 (48%), Gaps = 5/236 (2%)
Frame = +3
Query: 3 DIFISEGLHPRIITEGFDIARNKSLEVLESMKI--SIEIA--RENLVDVARTSLKTKVHP 170
+I ++ +HP++I +G+ IA +++ L + I S + A R +L ++ART+L +K+
Sbjct: 110 EIMVNAKIHPQVIIDGYRIATKTAIDALRASSIDNSSDPAKFRSDLENIARTTLSSKILS 169
Query: 171 SLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMP 350
+ VDAVL ++ +L ++I+++ ++ L +G +++ + P
Sbjct: 170 QNKNHFAQLAVDAVLRLK---GSTNLDNIQIIKILGGKLDDSFLDEGFILNK-TIGVNCP 225
Query: 351 KRVENAYILTCNVSLEYEKTEV-NSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKKKL 527
K +ENA IL N +++ +K +V + + +L AERE + +V KI
Sbjct: 226 KVMENANILIANTAMDTDKVKVFGARVRVDTTGKLAELERAEREKMKAKVEKI------- 278
Query: 528 CDGTDKTFVVINQKGIDPLSLDAFAKEXIIGLRRAKRRNMERLALTCGGSAVNSVD 695
+ IN++ I FA I+ + A +ERL+L GG ++ D
Sbjct: 279 --KSHNINCFINRQLIYNWPEQLFADAGIMSIEHADFDGIERLSLVTGGEIASTFD 332
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 60.9 bits (141), Expect = 2e-10
Identities = 57/244 (23%), Positives = 111/244 (45%), Gaps = 8/244 (3%)
Frame = +3
Query: 9 FISEGLHPRIITEGFDIARNKSLEVLESMKISIEIA-----RENLVDVARTSLKTKVHPS 173
F+ +G+ +I G+ A ++ ++ + I ++++ R+ L A T++ +K+ S
Sbjct: 115 FVEDGVSSHLIIRGYRKAAQLAVNKIKEIAIHLDLSDEGKLRDLLTKCASTAMNSKLIRS 174
Query: 174 LADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHG---ARHPD 344
+ T VDAVLT+ + ++ +M+ I ++ +++LVKG+ A
Sbjct: 175 NSTFFTKMVVDAVLTL--DQEDLNENMIGIKKVPGGAMEDSLLVKGVAFKKTFSYAGFEQ 232
Query: 345 MPKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKKK 524
PK +N IL +V LE + + N+ ++ + +V AE I ++ IVA K
Sbjct: 233 QPKFFKNPKILCLDVELELKAEKDNAEVRVDKVQEYQNIVDAEWRIIFSKLEAIVATGAK 292
Query: 525 LCDGTDKTFVVINQKGIDPLSLDAFAKEXIIGLRRAKRRNMERLALTCGGSAVNSVDDLT 704
VV+++ I L+ FA I R ++ R+ GGS ++ ++
Sbjct: 293 ---------VVLSKLPIGDLATQYFADRDIFCAGRVAADDLNRVVQAVGGSIQSTCSNIE 343
Query: 705 ENAL 716
E L
Sbjct: 344 EKHL 347
>SPBC16H5.13 |||WD repeat protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1026
Score = 29.1 bits (62), Expect = 0.71
Identities = 13/55 (23%), Positives = 23/55 (41%)
Frame = +3
Query: 408 TEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKKKLCDGTDKTFVVINQKG 572
T+ +FY+ + ER + KI+ KK L G+ F+ ++ G
Sbjct: 395 TKTGKAYFYQQLQGERWRFLCERALQSSSITKIIHAKKSLSSGSSGLFIFMSLDG 449
>SPBC18E5.02c ||SPBC29A3.20c|serine palmitoyltransferase complex
subunit |Schizosaccharomyces pombe|chr 2|||Manual
Length = 509
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 6 IFISEGLHPRIITEGFDIARNKSLEVLESMKI 101
+F+ E + I EGF IAR K +E LE +K+
Sbjct: 437 VFLLEEIVELCIAEGFLIARAKRVESLERVKV 468
>SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 537
Score = 27.9 bits (59), Expect = 1.6
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +3
Query: 105 IEIARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHK 281
I I L D++ T K VHPS++ L A + L +++ G + ++VE +HK
Sbjct: 7 ILITPSPLSDISTTINKPNVHPSMS--LLKALPECRLVVKSKGDKNNANVVEFPLDRHK 63
>SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 690
Score = 27.1 bits (57), Expect = 2.9
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 210 PHQRKHQLAHLQGLGGP*F*VKY 142
PHQR H A L GGP F + Y
Sbjct: 63 PHQRAHNAAALARSGGPGFSMNY 85
>SPCC1827.04 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 600
Score = 26.6 bits (56), Expect = 3.8
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 339 PDMPKRVENAYILTCNVSLEYEK-TEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVAL 515
P KR ++ +L C L K + V+S E+R++ E+E R+++
Sbjct: 327 PFTTKRATHSELLRCYKELVTPKISHVDSISIKAQEEERKRQAEIEKEIRQSRLQEEERK 386
Query: 516 KKKLCDGTD 542
KKKL T+
Sbjct: 387 KKKLAKYTE 395
>SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr
2|||Manual
Length = 997
Score = 26.6 bits (56), Expect = 3.8
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +2
Query: 296 CTCKRSSNGSWCTSPRYAKACRKC 367
C +R SNG WCT K C
Sbjct: 973 CIIERDSNGRWCTKHLQRKTKEVC 996
>SPAC4G9.11c |cmb1||cytosine-mismatch binding protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 223
Score = 26.2 bits (55), Expect = 5.0
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 333 RHPDMPKRVENAYIL 377
RHPD+PK+ +A+IL
Sbjct: 142 RHPDVPKKPSSAFIL 156
>SPCC970.02 |||mannan endo-1,6-alpha-mannosidase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 442
Score = 26.2 bits (55), Expect = 5.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 381 CNVSLEYEKTEVNSGFFYKS 440
CN L ++ TE NSG+ YK+
Sbjct: 162 CNGGLRWQITEFNSGYNYKN 181
>SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 774
Score = 25.8 bits (54), Expect = 6.6
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 21 GLHPRIITEGFDIARNKSLE-VLESMKISIEIARENLVDVARTSLKTKVHPSLADVLTDA 197
G P +I E +A S + ++E ++I+ + ++D + S + + ++AD+ D
Sbjct: 461 GRFPDVI-EVAQLALKHSCDFIIEGELVAIDKSNGQILDFQKLSTRERKKVTVADITIDV 519
Query: 198 CV 203
CV
Sbjct: 520 CV 521
>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 6.6
Identities = 11/43 (25%), Positives = 27/43 (62%)
Frame = +3
Query: 66 NKSLEVLESMKISIEIARENLVDVARTSLKTKVHPSLADVLTD 194
++SL++L+ + ++ ++ VD+ART ++ S ++V+ D
Sbjct: 270 SESLDLLDDFNYQVTVSNKSFVDIARTEYFITIY-SDSNVILD 311
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 25.4 bits (53), Expect = 8.7
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +3
Query: 339 PDMPKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEDR 452
PD V+NA + T +++ T V+ GF + + R
Sbjct: 11 PDFASDVDNASLFTQSIATTSASTSVDDGFSFDDSISR 48
>SPAC57A10.06 |mug15||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 133
Score = 25.4 bits (53), Expect = 8.7
Identities = 11/49 (22%), Positives = 21/49 (42%)
Frame = +3
Query: 243 DLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRVENAYILTCNV 389
+L + + + + TV K L+ G D+P ++ I CN+
Sbjct: 43 ELDALTTISLDELNKSPTVFTKNLLQGCGGTDLDVPAELKRLVIFVCNI 91
>SPBC1683.13c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 618
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = -3
Query: 718 LKAFSVRSSTELTADPPHVRARRSILRLFALRSPIIXSLAKASSDKGSIPFWL 560
LK VR++T+L P++ +F +S + +++ +G + FWL
Sbjct: 346 LKQTDVRNTTQL----PYISELDEPFEIFNKKSELFAAVSAGEDRRGLVQFWL 394
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,737,921
Number of Sequences: 5004
Number of extensions: 50110
Number of successful extensions: 155
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 149
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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