Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0469
(750 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 314 5e-86
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 95 5e-20
10_08_0620 - 19321612-19323237 87 1e-17
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 82 5e-16
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 81 1e-15
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 78 7e-15
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 75 6e-14
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 63 2e-10
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 62 5e-10
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 48 6e-06
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 39 0.004
09_04_0042 - 14055885-14056142,14057508-14057774,14057859-140592... 35 0.079
03_03_0266 - 16014740-16015045,16015566-16015601,16015623-160156... 33 0.18
08_02_0744 - 20659326-20659580,20659748-20660005,20660103-206615... 33 0.24
02_02_0480 + 10799242-10799365,10799748-10800044,10800081-108002... 33 0.32
03_01_0216 - 1700223-1700666,1700749-1700860,1701534-1701837,170... 31 1.3
06_01_0905 - 6974369-6974456,6974647-6974777 29 5.2
09_04_0662 + 19296395-19296532,19296650-19296742,19296976-192971... 28 9.1
02_03_0026 - 14045653-14045874,14047023-14047215,14047518-140476... 28 9.1
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 314 bits (771), Expect = 5e-86
Identities = 159/266 (59%), Positives = 193/266 (72%), Gaps = 20/266 (7%)
Frame = +3
Query: 12 ISEGLHPRIITEGFDIARNKSLEVLESMKISI----EIARENLVDVARTSLKTKV----- 164
I EG HPR + +GFD+A+ +LE LE K S+ E RE L +ART+L+TKV
Sbjct: 109 IDEGTHPRFLVDGFDVAKRATLEFLEKFKTSVVMGDEPDREILKMIARTTLRTKVGAVCF 168
Query: 165 -----------HPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATETVLVKG 311
+ LAD LTD V+AVL IR P +P+DL MVEIM M+HK +T LV+G
Sbjct: 169 LAFKLSLLGQLYEGLADQLTDIVVNAVLCIRKPDEPIDLFMVEIMHMRHKFDVDTRLVEG 228
Query: 312 LVMDHGARHPDMPKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQ 491
LV+DHG+RHPDM +R EN YILTCNVSLEYEK+E+N+GFFY +AE REK+VAAER +D+
Sbjct: 229 LVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEINAGFFYSNAEQREKMVAAERRQVDE 288
Query: 492 RVRKIVALKKKLCDGTDKTFVVINQKGIDPLSLDAFAKEXIIGLRRAKRRNMERLALTCG 671
RV++I+ LK K+C G DK FVVINQKGIDP SLD A+ IIGLRRAKRRNMERL L CG
Sbjct: 289 RVKRIIELKNKVCAGNDKNFVVINQKGIDPPSLDLLARAGIIGLRRAKRRNMERLVLACG 348
Query: 672 GSAVNSVDDLTENALSFAGLXYEHVL 749
G AV+SVDDLTE+ L +AGL YEH L
Sbjct: 349 GEAVDSVDDLTEDCLGWAGLVYEHTL 374
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 95.1 bits (226), Expect = 5e-20
Identities = 68/249 (27%), Positives = 119/249 (47%), Gaps = 6/249 (2%)
Frame = +3
Query: 12 ISEGLHPRIITEGFDIARNKSLEVLESMKISIEIA-RENLVDVARTSLKTKVHPSLADVL 188
+S G HP + +++EVL +M I IE++ R++LV A T+L +KV + +L
Sbjct: 118 LSAGAHPTAAADALHRLATRAVEVLHAMAIPIELSDRDSLVKSASTALNSKVVSQYSSLL 177
Query: 189 TDACVDAVLTIRTPGKP--VDLHMVEIMEMKHKTATETVLVKGLVMDHGARHP-DMPKRV 359
+ VDA L++ P P +DL + +++ T +T L++GL+ D A H P RV
Sbjct: 178 SPLAVDAALSVVDPAHPDLLDLRDIRVVKKLGGTVDDTELIRGLIFDKKASHAAGGPTRV 237
Query: 360 ENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKKKLCDGT 539
ENA I + KT++ ++++ ER +I V+KI A G
Sbjct: 238 ENAKIAVIQFQVSPPKTDIEQSVIVSDYAQMDRILREERNYILGMVKKIKA------SGC 291
Query: 540 DKTFV--VINQKGIDPLSLDAFAKEXIIGLRRAKRRNMERLALTCGGSAVNSVDDLTENA 713
+ + I + + LSL AK I+ ++ +R +E + T + +++ E+
Sbjct: 292 NVLLIQKSILRDAVTDLSLHYLAKAKILVVKDVERDEIEFITKTLNCLPIANIEHFREDK 351
Query: 714 LSFAGLXYE 740
L +A L E
Sbjct: 352 LGYADLVEE 360
>10_08_0620 - 19321612-19323237
Length = 541
Score = 87.0 bits (206), Expect = 1e-17
Identities = 66/249 (26%), Positives = 117/249 (46%), Gaps = 6/249 (2%)
Frame = +3
Query: 12 ISEGLHPRIITEGFDIARNKSLEVLESMKISIEIA-RENLVDVARTSLKTKVHPSLADVL 188
+S G HP + + +++EVL M I +E++ R+ LV A T+L +KV + +L
Sbjct: 122 LSAGAHPTAAADALHLLAARAVEVLHGMAIPVELSDRDALVKSASTALNSKVVSQYSTLL 181
Query: 189 TDACVDAVLTIRTPGKP--VDLHMVEIMEMKHKTATETVLVKGLVMDHGARH-PDMPKRV 359
+ VDA L + P P +DL + +++ T +T L++GLV++ A H P R+
Sbjct: 182 SPLAVDAALAVVDPAHPYLLDLRDIRVVKKLGCTVDDTELIRGLVLNKKASHVAGGPTRI 241
Query: 360 ENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKKKLCDGT 539
+A I + KT++ ++++ ER +I V+KI A G
Sbjct: 242 GDAKIAVIQFQVSPPKTDIEHSVVVSDYAQMDRILREERNYILGMVKKIKA------SGC 295
Query: 540 DKTFV--VINQKGIDPLSLDAFAKEXIIGLRRAKRRNMERLALTCGGSAVNSVDDLTENA 713
+ + I + + LSL AK I+ ++ +R +E + T + S++ L E+
Sbjct: 296 NVLLIQKSILRDSVTDLSLHYLAKAKIMVVKDVERDEIEFITKTLNCMPIASIEHLREDK 355
Query: 714 LSFAGLXYE 740
L A L E
Sbjct: 356 LGHAHLVEE 364
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 81.8 bits (193), Expect = 5e-16
Identities = 57/241 (23%), Positives = 118/241 (48%), Gaps = 7/241 (2%)
Frame = +3
Query: 9 FISEGLHPRIITEGFDIARNKSLEVLESMKISIEIA-RENLVDVARTSLKTKVHPSLADV 185
FI + HP +I + A + +L VL+ + I +++ R ++ + ++S+ TK D+
Sbjct: 112 FIDKNYHPTVICRAYTKALDDALSVLDKIAIPVDVDDRVAMLGLVKSSIGTKFTGQFGDL 171
Query: 186 LTDACVDAVLTIRTP---G-KPVDLHM-VEIMEMKHKTATETVLVKGLVMDHGARHPD-M 347
+ D +DA T G + VD+ +++ ++ ++ ++KG++++ P M
Sbjct: 172 IADLAIDATTTAGVDLGQGIREVDIKKYIKVEKVPGGQLEDSKVLKGVMINKDVVAPGKM 231
Query: 348 PKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKKKL 527
+++ N I+ + LEY+K E + ED + ++ E E+I+ +I+ K L
Sbjct: 232 RRKIVNPRIILLDCPLEYKKGENQTNAELMKEEDWQVMLQMEEEYIENLCAQILKFKPDL 291
Query: 528 CDGTDKTFVVINQKGIDPLSLDAFAKEXIIGLRRAKRRNMERLALTCGGSAVNSVDDLTE 707
VI +KG+ L++ K + +RR ++ + R+A CG VN ++L E
Sbjct: 292 ---------VITEKGLSDLAVHYLGKAGVSAIRRLRKTDNNRIAKACGAVIVNRPEELQE 342
Query: 708 N 710
+
Sbjct: 343 S 343
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 80.6 bits (190), Expect = 1e-15
Identities = 64/247 (25%), Positives = 107/247 (43%), Gaps = 4/247 (1%)
Frame = +3
Query: 12 ISEGLHPRIITEGFDIARNKSLEVLESMKISIEIAREN---LVDVARTSLKTKVHPSLAD 182
+ G+HP I EG+++A + + LE + E + N LV T+L +K+
Sbjct: 120 LERGIHPIRIAEGYELASRIAFDHLEHISHKFEFSATNIEPLVQTCMTTLSSKIVNRCKR 179
Query: 183 VLTDACVDAVLTIRT-PGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRV 359
L + V AVL + K V+L ++++ +T LV G+++D HP MPKR+
Sbjct: 180 TLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKRI 239
Query: 360 ENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKKKLCDGT 539
E+A I E K + + E + L E+++ D+ V+K C
Sbjct: 240 EDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQMLREQEQKYFDEMVQK--------CKDV 291
Query: 540 DKTFVVINQKGIDPLSLDAFAKEXIIGLRRAKRRNMERLALTCGGSAVNSVDDLTENALS 719
T +VI Q G D + + +R +E +A+ GG V +L+ L
Sbjct: 292 GAT-LVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSPEKLG 350
Query: 720 FAGLXYE 740
AG+ E
Sbjct: 351 KAGIVRE 357
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 78.2 bits (184), Expect = 7e-15
Identities = 54/243 (22%), Positives = 117/243 (48%), Gaps = 7/243 (2%)
Frame = +3
Query: 3 DIFISEGLHPRIITEGFDIARNKSLEVLESMKISIEIA-RENLVDVARTSLKTKVHPSLA 179
+ FI + HP +I + A +L VL+ + + +++ R ++ + ++S+ TK
Sbjct: 110 EAFIDKHYHPTVICRAYTKALEDALAVLDKIAMHVDVNDRAAMLGLVKSSIGTKFTGQFG 169
Query: 180 DVLTDACVDAVLT----IRTPGKPVDLHM-VEIMEMKHKTATETVLVKGLVMDHGARHPD 344
D++ D +DA T + + VD+ +++ ++ ++ ++KG++ + P
Sbjct: 170 DLIADLAIDATTTAGVDLGQGMREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPG 229
Query: 345 -MPKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKK 521
M +++ N I+ + +EY+K E + ED + L+ E E+I +I+ K
Sbjct: 230 KMRRKIVNPRIILLDCPVEYKKGENQTNAELMKEEDWQVLLEMEEEYIKNLCAQILKFKP 289
Query: 522 KLCDGTDKTFVVINQKGIDPLSLDAFAKEXIIGLRRAKRRNMERLALTCGGSAVNSVDDL 701
L V+ +KG+ L++ +K + +RR ++ + R+A CG VN ++L
Sbjct: 290 DL---------VVTEKGLSDLAIHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPEEL 340
Query: 702 TEN 710
E+
Sbjct: 341 QES 343
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 74.9 bits (176), Expect = 6e-14
Identities = 59/230 (25%), Positives = 115/230 (50%), Gaps = 5/230 (2%)
Frame = +3
Query: 24 LHPRIITEGF----DIARNKSLEVLESMKISIEIARENLVDVARTSLKTKVHPSLADVLT 191
+HP I G+ + ARN LE K +I+ R +L+++A T+L +K+ +
Sbjct: 114 IHPMTIIAGYRMAVECARNALLERTMDNKENIDKFRSDLMNIAMTTLSSKILSQDKEYFA 173
Query: 192 DACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRVENAY 371
+ VDAVL ++ +L ++I+++ + ++ L +G ++D PKR+ENA
Sbjct: 174 ELAVDAVLRLKGS---TNLEAIQILKIPGGSLKDSFLDEGFILDKKIGL-GQPKRIENAK 229
Query: 372 ILTCNVSLEYEKTEV-NSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKKKLCDGTDKT 548
IL N +++ +K ++ + S ++ AAE++ + ++V+KI+ G +
Sbjct: 230 ILVANTAMDTDKVKIYGARVRVDSMAKVAEIEAAEKQKMREKVQKIIG------HGIN-- 281
Query: 549 FVVINQKGIDPLSLDAFAKEXIIGLRRAKRRNMERLALTCGGSAVNSVDD 698
+N++ I + FA I+ + A +ERLAL GG ++ D+
Sbjct: 282 -CFVNRQLIYNFPEELFADAGILAIEHADFEGIERLALVTGGDIASTFDN 330
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 63.3 bits (147), Expect = 2e-10
Identities = 50/206 (24%), Positives = 101/206 (49%), Gaps = 1/206 (0%)
Frame = +3
Query: 84 LESMKISIEIARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEI 263
+ M I + R +L+++A T+L +K+ + VDAVL ++ +L ++I
Sbjct: 115 IHPMTIIADKFRSDLMNIAMTTLSSKILSQDKEYFAGLAVDAVLRLKGS---TNLEAIQI 171
Query: 264 MEMKHKTATETVLVKGLVMDHGARHPDMPKRVENAYILTCNVSLEYEKTEV-NSGFFYKS 440
++ + ++ L +G ++D PKR+ENA IL N +++ +K ++ + S
Sbjct: 172 LKKTGGSLKDSFLDEGFILDKKIGL-GQPKRIENAKILVANTAMDTDKVKIYGARVRVDS 230
Query: 441 AEDREKLVAAEREFIDQRVRKIVALKKKLCDGTDKTFVVINQKGIDPLSLDAFAKEXIIG 620
++ AAE++ + ++V+KI+ G + +N++ I + FA I+
Sbjct: 231 MAKVAEIEAAEKQKMREKVQKIIG------HGIN---CFVNRQLIYNFPEELFADAGILA 281
Query: 621 LRRAKRRNMERLALTCGGSAVNSVDD 698
+ A +ERLAL GG ++ D+
Sbjct: 282 IEHADFEGIERLALVTGGDIASTFDN 307
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 62.1 bits (144), Expect = 5e-10
Identities = 57/244 (23%), Positives = 106/244 (43%), Gaps = 8/244 (3%)
Frame = +3
Query: 9 FISEGLHPRIITEGFDIARNKSLEVLESMKISI-----EIARENLVDVARTSLKTKVHPS 173
+I +G+HP + + A + ++E ++ + SI E +E L A T+L +K+
Sbjct: 114 YIEDGVHPHSLIRSYRTAGHLAIEKVKDLATSIEGKSLEEKKELLAKCAATTLSSKLIGG 173
Query: 174 LADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHG---ARHPD 344
+ VDAVL I + L+++ I ++ T ++ LV G+ A
Sbjct: 174 EKEFFASMVVDAVLAISNDDR---LNLLGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQ 230
Query: 345 MPKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKKK 524
PK+ + IL N+ LE + + N+ + +V AE I ++ K V K
Sbjct: 231 QPKKFLSPKILLLNIELELKSEKENAEIRLSDPLQYQSIVDAEWNIIYDKLDKCVKSGAK 290
Query: 525 LCDGTDKTFVVINQKGIDPLSLDAFAKEXIIGLRRAKRRNMERLALTCGGSAVNSVDDLT 704
+V+++ I L+ FA I R +++R+A GG+ SV+++
Sbjct: 291 ---------IVLSRLAIGDLATQYFADRDIFCAGRVAEEDLQRVAAATGGTVQTSVNNVI 341
Query: 705 ENAL 716
+ L
Sbjct: 342 DEVL 345
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 48.4 bits (110), Expect = 6e-06
Identities = 56/245 (22%), Positives = 107/245 (43%), Gaps = 7/245 (2%)
Frame = +3
Query: 12 ISEGLHPRIITEGFDIARNKSLEVLESM----KISIEIA-RENLVDVARTSLKTKVHPSL 176
I GLHP I G+ A NK++E+LE + ++++ +E +V + R+++ +K
Sbjct: 114 IRMGLHPSEIIIGYTKAINKTVEILEDLVEKGSENMDVRNKEEVVLLMRSAVASKQF-GQ 172
Query: 177 ADVLTDACVDAVLTIRTPGKPVDLHM--VEIMEMKHKTATETVLVKGLVMDHGARHPDMP 350
D+L DA + + P P + ++ V + ++ + +V+G+V+ + A
Sbjct: 173 EDILCPLVADACMQV-CPKNPANFNVDNVRVAKLLGGGLHNSSVVRGMVLKNDA--VGSI 229
Query: 351 KRVENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKKKLC 530
KRVE A I ++ TE SAE E E K+ L K +
Sbjct: 230 KRVEKAKIAVFAGGVDTSATETKGTVLIHSAEQLENYAKTEE-------AKVEELIKAVA 282
Query: 531 DGTDKTFVVINQKGIDPLSLDAFAKEXIIGLRRAKRRNMERLALTCGGSAVNSVDDLTEN 710
D K V+++ + ++L + ++ LR + + + R T G A+ + +
Sbjct: 283 DSGAK--VIVSGAAVGDMALHFCERYKLMVLRISSKFELRRFCRTTGSIALLKLSRPNAD 340
Query: 711 ALSFA 725
L +A
Sbjct: 341 ELGYA 345
>08_02_0864 +
21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 39.1 bits (87), Expect = 0.004
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 1/151 (0%)
Frame = +3
Query: 288 TETVLVKGLVMDHGARHPDMPKRVENAYILTCNVSLEYEK-TEVNSGFFYKSAEDREKLV 464
+++ +VKG+V H M R E IL +LEY++ + + S F + L+
Sbjct: 467 SDSFVVKGVVCKKNVAHRRMASRKEKPRILILGGALEYQRISNLLSSF--------DTLL 518
Query: 465 AAEREFIDQRVRKIVALKKKLCDGTDKTFVVINQKGIDPLSLDAFAKEXIIGLRRAKRRN 644
E +++ V KI A + VV+ +K + + D F ++ I + KR
Sbjct: 519 QQETDYLKMAVAKIKAHQPS---------VVLVEKSVSRYAQDLFLEKNISLVLNIKRPL 569
Query: 645 MERLALTCGGSAVNSVDDLTENALSFAGLXY 737
+ER++ G V S+D ++ L L +
Sbjct: 570 LERISRCTGAHIVPSIDYVSSQKLGHCDLFH 600
>09_04_0042 -
14055885-14056142,14057508-14057774,14057859-14059292,
14059378-14059539,14059642-14059768,14059869-14060200,
14060289-14061083,14061379-14061714,14061791-14062730,
14063338-14063588
Length = 1633
Score = 34.7 bits (76), Expect = 0.079
Identities = 31/138 (22%), Positives = 59/138 (42%)
Frame = +3
Query: 303 VKGLVMDHGARHPDMPKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREF 482
VKG+V +H M +NA +L +LEY+K ++ E+E
Sbjct: 349 VKGIVCSKNVKHKRMVSEHQNATLLILGGALEYQKVS-------NKLASIGTILEQEKEH 401
Query: 483 IDQRVRKIVALKKKLCDGTDKTFVVINQKGIDPLSLDAFAKEXIIGLRRAKRRNMERLAL 662
+ V KI + + V++ +K + + + AK+ + L KR ++R++
Sbjct: 402 LRMIVGKIESRRPN---------VLLVEKSVSSFAQELLAKDISLVL-NVKRPLLDRISR 451
Query: 663 TCGGSAVNSVDDLTENAL 716
GG +S+D++ L
Sbjct: 452 CTGGQIASSIDNIASARL 469
>03_03_0266 -
16014740-16015045,16015566-16015601,16015623-16015643,
16016331-16016591,16017504-16018985,16019834-16019989,
16020154-16020277,16020399-16020615,16020877-16021774,
16022947-16023291,16023371-16023565,16023751-16024453,
16024866-16025467
Length = 1781
Score = 33.5 bits (73), Expect = 0.18
Identities = 34/148 (22%), Positives = 58/148 (39%)
Frame = +3
Query: 294 TVLVKGLVMDHGARHPDMPKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAE 473
+ +VKG+V H M R+E +L +LEY++ + L+ E
Sbjct: 449 STVVKGVVCKKNVAHRRMTSRIEKPRLLLLAGALEYQRVT-------NQLSSIDTLLQQE 501
Query: 474 REFIDQRVRKIVALKKKLCDGTDKTFVVINQKGIDPLSLDAFAKEXIIGLRRAKRRNMER 653
+ + V KIVA K L ++ + + + D ++ I + KR ++R
Sbjct: 502 TDHLKMAVAKIVAQKPNL---------LLVEHTVSRYAQDLLLEKNISLVLNIKRPLLDR 552
Query: 654 LALTCGGSAVNSVDDLTENALSFAGLXY 737
+A V S+D L L L Y
Sbjct: 553 IARCTNAHIVPSIDLLPSQKLGHCELFY 580
>08_02_0744 -
20659326-20659580,20659748-20660005,20660103-20661575,
20661677-20661835,20661948-20662074,20662155-20662486,
20662574-20663383,20663772-20664110,20664187-20664340,
20664427-20665143,20665699-20665967
Length = 1630
Score = 33.1 bits (72), Expect = 0.24
Identities = 32/152 (21%), Positives = 64/152 (42%)
Frame = +3
Query: 288 TETVLVKGLVMDHGARHPDMPKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVA 467
+++ LV+G+V +H M NA +L +LEY+K + ++
Sbjct: 327 SDSNLVRGVVCSKNVKHKRMASEHVNAKLLILGGALEYQKVT-------NKLASIDTILE 379
Query: 468 AEREFIDQRVRKIVALKKKLCDGTDKTFVVINQKGIDPLSLDAFAKEXIIGLRRAKRRNM 647
E+E + V KI + + V++ +K + + + AK+ + L KR +
Sbjct: 380 QEKEHLRAIVAKIESRRPN---------VLLVEKSVSSYAQELLAKDISLVL-NVKRPLL 429
Query: 648 ERLALTCGGSAVNSVDDLTENALSFAGLXYEH 743
+R++ G +S+D++ L L H
Sbjct: 430 DRISRCSGAQIASSIDNIASARLGQCELFKVH 461
>02_02_0480 +
10799242-10799365,10799748-10800044,10800081-10800248,
10800525-10800805,10800860-10801205,10801425-10801428,
10801533-10801575
Length = 420
Score = 32.7 bits (71), Expect = 0.32
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 321 DHGARHPDMPKR--VENAYILTCNVSLEYEKTEVNSGFFYKSAE 446
D A HPD R V +AY L CN+SL+ EK+ + + + E
Sbjct: 175 DFLAWHPDKTGRFSVRSAYSLACNISLDVEKSRFGNEWLFDMLE 218
>03_01_0216 -
1700223-1700666,1700749-1700860,1701534-1701837,
1702358-1702426,1702543-1702657,1702740-1702811,
1702918-1703016,1703148-1703219,1703394-1703465,
1704940-1705154,1705277-1705495,1705792-1707076,
1707270-1707398
Length = 1068
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 324 HGARHPDMPKRVE-NAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVR 500
+ A D PK+VE +L LEY +T++ YKS D ER D+ R
Sbjct: 606 NSAVQEDAPKKVEVEKQVLDSREKLEYYRTKMQDLVLYKSRCDNRLNEITERASSDK--R 663
Query: 501 KIVALKKK 524
++ +L KK
Sbjct: 664 EVESLAKK 671
>06_01_0905 - 6974369-6974456,6974647-6974777
Length = 72
Score = 28.7 bits (61), Expect = 5.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 556 LSTKKESTPCHWMLLP 603
+S KKES+P HW +LP
Sbjct: 56 ISGKKESSPLHWKILP 71
>09_04_0662 +
19296395-19296532,19296650-19296742,19296976-19297128,
19297213-19297596
Length = 255
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +3
Query: 369 YILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALK 518
YIL V+L+Y + GFF S + ++ ++ I + R ++A++
Sbjct: 177 YILDNTVALKYLTLDTTRGFFSCSTGEHDRCFPMDKIMITEAKRAVLAIQ 226
>02_03_0026 - 14045653-14045874,14047023-14047215,14047518-14047618,
14050145-14050272,14050409-14050502,14050749-14051237,
14052622-14052915,14053602-14053732,14053829-14055440,
14055539-14055651,14055902-14056933,14057023-14057145,
14057250-14057688
Length = 1656
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +3
Query: 435 KSAEDREKLVAAEREFIDQRVRKIVALKKKLCDGTDKTFVVINQKG 572
+S ++ E A + E QRV+ V + +++ D K+ V I+Q+G
Sbjct: 1347 QSVQELEGYAAYKAEETTQRVQGCVRIAEEMRDTASKSLVTIHQQG 1392
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,495,496
Number of Sequences: 37544
Number of extensions: 318930
Number of successful extensions: 834
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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