Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0469
(750 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g02530.1 68416.m00241 chaperonin, putative similar to SWISS-P... 318 3e-87
At5g16070.1 68418.m01878 chaperonin, putative similar to SWISS-P... 316 1e-86
At3g18190.1 68416.m02314 chaperonin, putative similar to SWISS-P... 96 2e-20
At5g26360.1 68418.m03151 chaperonin, putative similar to SWISS-P... 87 2e-17
At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit, pu... 80 1e-15
At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit, pu... 80 1e-15
At5g20890.1 68418.m02481 chaperonin, putative similar to SWISS-P... 66 2e-11
At3g11830.1 68416.m01450 chaperonin, putative similar to SWISS-P... 58 6e-09
At3g03960.1 68416.m00415 chaperonin, putative similar to SWISS-P... 41 0.001
At4g33240.1 68417.m04731 phosphatidylinositol-4-phosphate 5-kina... 38 0.005
At3g14270.1 68416.m01806 phosphatidylinositol-4-phosphate 5-kina... 35 0.066
At1g71010.1 68414.m08192 phosphatidylinositol-4-phosphate 5-kina... 29 2.5
At4g25160.1 68417.m03622 protein kinase family protein contains ... 29 3.3
At3g59120.1 68416.m06591 DC1 domain-containing protein contains ... 29 3.3
At5g26710.1 68418.m03168 glutamate-tRNA ligase, putative / gluta... 28 5.8
At1g72320.3 68414.m08362 pumilio/Puf RNA-binding domain-containi... 28 7.6
At1g72320.2 68414.m08361 pumilio/Puf RNA-binding domain-containi... 28 7.6
At1g72320.1 68414.m08363 pumilio/Puf RNA-binding domain-containi... 28 7.6
>At3g02530.1 68416.m00241 chaperonin, putative similar to
SWISS-PROT:P80317- T-complex protein 1, zeta subunit
(TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 535
Score = 318 bits (780), Expect = 3e-87
Identities = 150/250 (60%), Positives = 193/250 (77%), Gaps = 4/250 (1%)
Frame = +3
Query: 12 ISEGLHPRIITEGFDIARNKSLEVLESMKISI----EIARENLVDVARTSLKTKVHPSLA 179
I EG+HPR++ +GF+IA+ +L+ L++ K + E +E L VART+L+TK++ LA
Sbjct: 109 IDEGMHPRVLVDGFEIAKRATLQFLDTFKTPVVMGDEPDKEILKMVARTTLRTKLYEGLA 168
Query: 180 DVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRV 359
D LTD V++VL IR P +P+DL MVEIM M+HK +T LV+GLV+DHG+RHPDM +R
Sbjct: 169 DQLTDIVVNSVLCIRKPQEPIDLFMVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRA 228
Query: 360 ENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKKKLCDGT 539
EN +ILTCNVSLEYEK+E+N+GFFY +AE RE +V AER +D+RV+KI+ LK K+C G
Sbjct: 229 ENCHILTCNVSLEYEKSEINAGFFYSNAEQREAMVTAERRSVDERVQKIIELKNKVCAGN 288
Query: 540 DKTFVVINQKGIDPLSLDAFAKEXIIGLRRAKRRNMERLALTCGGSAVNSVDDLTENALS 719
D +FV++NQKGIDP SLD A+E II LRRAKRRNMERL L CGG AVNSVDDLT + L
Sbjct: 289 DNSFVILNQKGIDPPSLDLLAREGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPDCLG 348
Query: 720 FAGLXYEHVL 749
+AGL YEHVL
Sbjct: 349 WAGLVYEHVL 358
>At5g16070.1 68418.m01878 chaperonin, putative similar to
SWISS-PROT:P80317 T-complex protein 1, zeta subunit
(TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 535
Score = 316 bits (776), Expect = 1e-86
Identities = 152/250 (60%), Positives = 194/250 (77%), Gaps = 4/250 (1%)
Frame = +3
Query: 12 ISEGLHPRIITEGFDIARNKSLEVLESMKISI----EIARENLVDVARTSLKTKVHPSLA 179
I EG+HPR++ +GF+IA+ +L+ L++ K + E+ +E L VART+L+TK++ LA
Sbjct: 109 IDEGMHPRVLVDGFEIAKRATLQFLDNFKTPVVMGDEVDKEILKMVARTTLRTKLYEGLA 168
Query: 180 DVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRV 359
D LTD V++VL IR P + +DL MVEIM M+HK +T LV+GLV+DHG+RHPDM +R
Sbjct: 169 DQLTDIVVNSVLCIRKPEEAIDLFMVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRA 228
Query: 360 ENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKKKLCDGT 539
EN +ILTCNVSLEYEK+E+N+GFFY +AE RE +V AER +D+RV+KI+ LKKK+C G
Sbjct: 229 ENCHILTCNVSLEYEKSEINAGFFYSNAEQREAMVTAERRSVDERVKKIIELKKKVC-GD 287
Query: 540 DKTFVVINQKGIDPLSLDAFAKEXIIGLRRAKRRNMERLALTCGGSAVNSVDDLTENALS 719
+ FVVINQKGIDP SLD A+E IIGLRRAKRRNMERL L CGG AVNSVDDLT +L
Sbjct: 288 NDNFVVINQKGIDPPSLDLLAREGIIGLRRAKRRNMERLVLACGGEAVNSVDDLTPESLG 347
Query: 720 FAGLXYEHVL 749
+AGL YEHVL
Sbjct: 348 WAGLVYEHVL 357
>At3g18190.1 68416.m02314 chaperonin, putative similar to
SWISS-PROT:P50991- T-complex protein 1, delta subunit
(TCP-1-delta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 536
Score = 96.3 bits (229), Expect = 2e-20
Identities = 70/249 (28%), Positives = 121/249 (48%), Gaps = 6/249 (2%)
Frame = +3
Query: 12 ISEGLHPRIITEGFDIARNKSLEVLESMKISIEIA-RENLVDVARTSLKTKVHPSLADVL 188
++ G+HP +I++ A K++++L +M + +E+ R++LV A TSL +KV + +L
Sbjct: 120 LTNGIHPTVISDSLHKACGKAIDILTAMAVPVELTDRDSLVKSASTSLNSKVVSQYSTLL 179
Query: 189 TDACVDAVLTIRTPGKP--VDLHMVEIMEMKHKTATETVLVKGLVMDHG-ARHPDMPKRV 359
VDAVL++ P KP VDL ++I++ T +T VKGLV D +R P RV
Sbjct: 180 APLAVDAVLSVIDPEKPEIVDLRDIKIVKKLGGTVDDTHTVKGLVFDKKVSRAAGGPTRV 239
Query: 360 ENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKKKLCDGT 539
ENA I + KT++ ++++ ER +I ++KI A G
Sbjct: 240 ENAKIAVIQFQISPPKTDIEQSIVVSDYTQMDRILKEERNYILGMIKKIKA------TGC 293
Query: 540 DKTFV--VINQKGIDPLSLDAFAKEXIIGLRRAKRRNMERLALTCGGSAVNSVDDLTENA 713
+ + I + + LSL AK I+ ++ +R +E + T + +++
Sbjct: 294 NVLLIQKSILRDAVTDLSLHYLAKAKIMVIKDVERDEIEFVTKTLNCLPIANIEHFRAEK 353
Query: 714 LSFAGLXYE 740
L A L E
Sbjct: 354 LGHADLVEE 362
>At5g26360.1 68418.m03151 chaperonin, putative similar to
SWISS-PROT:P50143- T-complex protein 1, gamma subunit
(TCP-1-gamma) [Xenopus laevis]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 555
Score = 86.6 bits (205), Expect = 2e-17
Identities = 64/251 (25%), Positives = 124/251 (49%), Gaps = 8/251 (3%)
Frame = +3
Query: 3 DIFISEGLHPRIITEGFDIARNKSLEVLESMKISIEIA-RENLVDVARTSLKTKVHPSLA 179
+ F+ + HP +I + A S+ VL+ + +SI+I R ++ + ++ + TK
Sbjct: 108 EAFLEKNYHPTVICRAYIKALEDSIAVLDKIAMSIDINDRSQVLGLVKSCIGTKFTSQFG 167
Query: 180 DVLTDACVDAVLTIRTP---G-KPVDLHM-VEIMEMKHKTATETVLVKGLVMDHGARHPD 344
D++ D +DA T+ G + VD+ +++ ++ ++ ++KG++ + P
Sbjct: 168 DLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQFEDSEVLKGVMFNKDVVAPG 227
Query: 345 -MPKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKK 521
M +++ N I+ + LEY+K E + ED E L+ E E+I+ +I+ K
Sbjct: 228 KMKRKIVNPRIILLDCPLEYKKGENQTNAELVREEDWEVLLKLEEEYIENICVQILKFKP 287
Query: 522 KLCDGTDKTFVVINQKGIDPLSLDAFAKEXIIGLRRAKRRNMERLALTCGGSAVNSVDDL 701
L VI +KG+ L+ F+K + +RR ++ + R+A CG VN D+L
Sbjct: 288 DL---------VITEKGLSDLACHYFSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDEL 338
Query: 702 TENAL-SFAGL 731
E+ + + AGL
Sbjct: 339 QESDIGTGAGL 349
>At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative identical to SWISS-PROT:O04450- T-complex
protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
thaliana]; strong similarity to SP|P54411 T-complex
protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
(TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
TCP-1/cpn60 chaperonin family
Length = 459
Score = 80.2 bits (189), Expect = 1e-15
Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 4/247 (1%)
Frame = +3
Query: 12 ISEGLHPRIITEGFDIARNKSLEVLE--SMKISIEIAR-ENLVDVARTSLKTKVHPSLAD 182
+ G+HP I EG+++A ++E LE + K ++ E LV T+L +K+
Sbjct: 44 LDRGIHPIRIAEGYEMASRVAVEHLERIAQKFEFDVNNYEPLVQTCMTTLSSKIVNRCKR 103
Query: 183 VLTDACVDAVLTIRT-PGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRV 359
L + V AVL + + V+L ++++ +T L+ G+++D HP MPK++
Sbjct: 104 SLAEIAVKAVLAVADLERRDVNLDLIKVEGKVGGKLEDTELIYGILIDKDMSHPQMPKQI 163
Query: 360 ENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKKKLCDGT 539
E+A+I E K + + E E L E+++ D+ V+K C
Sbjct: 164 EDAHIAILTCPFEPPKPKTKHKVDIDTVEKFETLRKQEQQYFDEMVQK--------CKDV 215
Query: 540 DKTFVVINQKGIDPLSLDAFAKEXIIGLRRAKRRNMERLALTCGGSAVNSVDDLTENALS 719
T +VI Q G D + + +R +E +A+ GG V +LT L
Sbjct: 216 GAT-LVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLG 274
Query: 720 FAGLXYE 740
AG+ E
Sbjct: 275 KAGVVRE 281
>At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative identical to SWISS-PROT:O04450- T-complex
protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
thaliana]; strong similarity to SP|P54411 T-complex
protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
(TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
TCP-1/cpn60 chaperonin family
Length = 535
Score = 80.2 bits (189), Expect = 1e-15
Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 4/247 (1%)
Frame = +3
Query: 12 ISEGLHPRIITEGFDIARNKSLEVLE--SMKISIEIAR-ENLVDVARTSLKTKVHPSLAD 182
+ G+HP I EG+++A ++E LE + K ++ E LV T+L +K+
Sbjct: 120 LDRGIHPIRIAEGYEMASRVAVEHLERIAQKFEFDVNNYEPLVQTCMTTLSSKIVNRCKR 179
Query: 183 VLTDACVDAVLTIRT-PGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRV 359
L + V AVL + + V+L ++++ +T L+ G+++D HP MPK++
Sbjct: 180 SLAEIAVKAVLAVADLERRDVNLDLIKVEGKVGGKLEDTELIYGILIDKDMSHPQMPKQI 239
Query: 360 ENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKKKLCDGT 539
E+A+I E K + + E E L E+++ D+ V+K C
Sbjct: 240 EDAHIAILTCPFEPPKPKTKHKVDIDTVEKFETLRKQEQQYFDEMVQK--------CKDV 291
Query: 540 DKTFVVINQKGIDPLSLDAFAKEXIIGLRRAKRRNMERLALTCGGSAVNSVDDLTENALS 719
T +VI Q G D + + +R +E +A+ GG V +LT L
Sbjct: 292 GAT-LVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLG 350
Query: 720 FAGLXYE 740
AG+ E
Sbjct: 351 KAGVVRE 357
>At5g20890.1 68418.m02481 chaperonin, putative similar to
SWISS-PROT:P78371- T-complex protein 1, beta subunit
(TCP-1-beta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 527
Score = 66.1 bits (154), Expect = 2e-11
Identities = 56/234 (23%), Positives = 111/234 (47%), Gaps = 5/234 (2%)
Frame = +3
Query: 12 ISEGLHPRIITEGF----DIARNKSLEVLESMKISIEIARENLVDVARTSLKTKVHPSLA 179
++ +HP I G+ + ARN L+ + K + E R +L+ +A T+L +K+
Sbjct: 112 VASKIHPMTIIAGYRMASECARNALLKRVIDNKDNAEKFRSDLLKIAMTTLCSKILSQDK 171
Query: 180 DVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRV 359
+ + VDAV ++ +L ++I++ + ++ L +G ++D PKR+
Sbjct: 172 EHFAEMAVDAVFRLKGS---TNLEAIQIIKKPGGSLKDSFLDEGFILDKKIGI-GQPKRI 227
Query: 360 ENAYILTCNVSLEYEKTEV-NSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKKKLCDG 536
ENA IL N +++ +K ++ + S ++ AE+E + +V+KI+ G
Sbjct: 228 ENANILVANTAMDTDKVKIYGARVRVDSMTKVAEIEGAEKEKMKDKVKKIIG------HG 281
Query: 537 TDKTFVVINQKGIDPLSLDAFAKEXIIGLRRAKRRNMERLALTCGGSAVNSVDD 698
+ +N++ I + FA I+ + A +ERL L GG ++ D+
Sbjct: 282 IN---CFVNRQLIYNFPEELFADAGILAIEHADFEGIERLGLVTGGEIASTFDN 332
>At3g11830.1 68416.m01450 chaperonin, putative similar to
SWISS-PROT:P80313 T-complex protein 1, eta subunit
(TCP-1-eta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 557
Score = 58.0 bits (134), Expect = 6e-09
Identities = 57/244 (23%), Positives = 102/244 (41%), Gaps = 8/244 (3%)
Frame = +3
Query: 9 FISEGLHPRIITEGFDIARNKSLEVLESMKISIE--IAREN---LVDVARTSLKTKVHPS 173
FI +G+H + + + A ++ ++ + +SIE E L A T+L +K+
Sbjct: 114 FIEDGVHAQNLIRSYRTASTLAIAKVKELAVSIEGKSVEEKKGLLAKCAATTLSSKLIGG 173
Query: 174 LADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHG---ARHPD 344
+ VDAV+ I G L+++ I ++ ++ LV G+ A
Sbjct: 174 EKEFFATMVVDAVMAI---GNDDRLNLIGIKKVPGGNMRDSFLVDGVAFKKTFSYAGFEQ 230
Query: 345 MPKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKKK 524
PK+ N IL N+ LE + + N+ + +V AE I ++ K V K
Sbjct: 231 QPKKFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVESGAK 290
Query: 525 LCDGTDKTFVVINQKGIDPLSLDAFAKEXIIGLRRAKRRNMERLALTCGGSAVNSVDDLT 704
VV+++ I L+ FA I R ++ R+A GG+ SV+++
Sbjct: 291 ---------VVLSRLAIGDLATQYFADRDIFCAGRVAEEDLNRVAAAAGGTVQTSVNNII 341
Query: 705 ENAL 716
+ L
Sbjct: 342 DEVL 345
>At3g03960.1 68416.m00415 chaperonin, putative similar to
SWISS-PROT:P42932- T-complex protein 1, theta subunit
(TCP-1-theta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 549
Score = 40.7 bits (91), Expect = 0.001
Identities = 46/233 (19%), Positives = 99/233 (42%), Gaps = 10/233 (4%)
Frame = +3
Query: 12 ISEGLHPRIITEGFDIARNKSLEVLESM----KISIEIA-RENLVDVARTSLKTK---VH 167
I GLHP I G+ A +K++E+LE + ++++ ++ ++ R ++ +K
Sbjct: 119 IRMGLHPSEIISGYTKAVSKAVEILEQLVETGSETMDVRNKDEVISRMRAAVASKQFGQE 178
Query: 168 PSLADVLTDACVDAVLTIRTPGKPVDLHM--VEIMEMKHKTATETVLVKGLVMDHGARHP 341
+ ++TDAC+ P P + ++ V + ++ + +V+G+V+ A
Sbjct: 179 EIICSLVTDACIQV-----CPKNPTNFNVDNVRVSKLLGGGLHNSCIVRGMVLKSDA--V 231
Query: 342 DMPKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKK 521
KR+E A + ++ TE SAE E E +++ ++ +
Sbjct: 232 GSIKRMEKAKVAVFAGGVDTTATETKGTVLIHSAEQLENYAKTEEAKVEELIKAVAESGA 291
Query: 522 KLCDGTDKTFVVINQKGIDPLSLDAFAKEXIIGLRRAKRRNMERLALTCGGSA 680
K V+++ I ++L + I+ L+ + + + R T G A
Sbjct: 292 K---------VIVSGGSIGEMALHFCERYKIMVLKISSKFELRRFCRTAGAVA 335
>At4g33240.1 68417.m04731 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to SP|Q9Z1T6 FYVE
finger-containing phosphoinositide kinase (EC 2.7.1.68)
(1- phosphatidylinositol-4-phosphate kinase) (PIP5K)
(PtdIns(4)P-5-kinase) {Mus musculus}; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF01363: FYVE zinc finger, PF00118:
TCP-1/cpn60 chaperonin family
Length = 1756
Score = 38.3 bits (85), Expect = 0.005
Identities = 33/150 (22%), Positives = 64/150 (42%)
Frame = +3
Query: 288 TETVLVKGLVMDHGARHPDMPKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVA 467
+E+++VKG+V H M ++E +L +LEY++ F + L+
Sbjct: 438 SESMVVKGVVCKKNVAHRRMTSKIEKPRLLILGGALEYQRISNQLSSF-------DTLLQ 490
Query: 468 AEREFIDQRVRKIVALKKKLCDGTDKTFVVINQKGIDPLSLDAFAKEXIIGLRRAKRRNM 647
E + + V KI D + +++ +K + + + + I + KR +
Sbjct: 491 QEMDHLKMAVAKI--------DSHNPDILLV-EKSVSRFAQEYLLAKDISLVLNIKRSLL 541
Query: 648 ERLALTCGGSAVNSVDDLTENALSFAGLXY 737
ER++ G V S+D LT L + L +
Sbjct: 542 ERISRCTGAQIVPSIDQLTSPKLGYCDLFH 571
>At3g14270.1 68416.m01806 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to SP|Q9Z1T6 FYVE
finger-containing phosphoinositide kinase (EC 2.7.1.68)
(1- phosphatidylinositol-4-phosphate kinase) (PIP5K)
(PtdIns(4)P-5-kinase) {Mus musculus}; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF01363: FYVE zinc finger, PF00118:
TCP-1/cpn60 chaperonin family
Length = 1791
Score = 34.7 bits (76), Expect = 0.066
Identities = 30/144 (20%), Positives = 63/144 (43%)
Frame = +3
Query: 291 ETVLVKGLVMDHGARHPDMPKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAA 470
++++VKG+V + M ++E A +L LEY++ F + L+
Sbjct: 452 DSMVVKGVVCKKNVVNRRMSTKIEKARLLILGGGLEYQRVSNQLSSF-------DTLLQQ 504
Query: 471 EREFIDQRVRKIVALKKKLCDGTDKTFVVINQKGIDPLSLDAFAKEXIIGLRRAKRRNME 650
E++ + V KI A ++ +++ +K + + + + I + KR ++
Sbjct: 505 EKDHLKMAVAKIHA---------ERPNILLVEKSVSRFAQEYLLAKDISLVLNIKRPLLD 555
Query: 651 RLALTCGGSAVNSVDDLTENALSF 722
R+A G + SVD L+ L +
Sbjct: 556 RIARCTGAQIIPSVDHLSSQKLGY 579
>At1g71010.1 68414.m08192 phosphatidylinositol-4-phosphate 5-kinase
family protein low similarity to phosphatidylinositol
3,5-kinase [Candida albicans] GI:14571648; contains Pfam
profile PF01504: Phosphatidylinositol-4-phosphate
5-Kinase
Length = 1648
Score = 29.5 bits (63), Expect = 2.5
Identities = 30/147 (20%), Positives = 59/147 (40%)
Frame = +3
Query: 291 ETVLVKGLVMDHGARHPDMPKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAA 470
E++L++G+V H M + +N ++ SLEY++ F L+
Sbjct: 396 ESILIRGIVCSKNITHKRMISQYKNPRVMLLAGSLEYQRVAGQLASF-------NTLLQQ 448
Query: 471 EREFIDQRVRKIVALKKKLCDGTDKTFVVINQKGIDPLSLDAFAKEXIIGLRRAKRRNME 650
E E + + KI +L+ V++ +K + ++ I + KR ++
Sbjct: 449 ENEHMKAIIAKIESLRPN---------VLLVEKSASSYAQQYLLEKEISLVLNVKRSLLD 499
Query: 651 RLALTCGGSAVNSVDDLTENALSFAGL 731
R+A G S+D ++ L L
Sbjct: 500 RIARCTGAVLCPSLDSISTARLGHCEL 526
>At4g25160.1 68417.m03622 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain
Length = 835
Score = 29.1 bits (62), Expect = 3.3
Identities = 22/78 (28%), Positives = 35/78 (44%)
Frame = +3
Query: 63 RNKSLEVLESMKISIEIARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPV 242
+++ L LE++K E AR + V+ + P L DV+ + CV A G
Sbjct: 738 KDQILPALENLKKVAEKARNSFSGVSTQPPTHFICPLLKDVMNEPCVAA------DGYTY 791
Query: 243 DLHMVEIMEMKHKTATET 296
D H +E +H T+ T
Sbjct: 792 DRHAIEEWLKEHNTSPMT 809
>At3g59120.1 68416.m06591 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 602
Score = 29.1 bits (62), Expect = 3.3
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -1
Query: 249 ADQQVCLEFEW*VPHQRKHQLAHLQGLG 166
+ + +CL ++ PH +KH+ HL +G
Sbjct: 565 SSRPICLTCQYHCPHHKKHEKTHLPSIG 592
>At5g26710.1 68418.m03168 glutamate-tRNA ligase, putative /
glutamyl-tRNA synthetase, putatuve / GluRS, putative
identical to gi:3435196
Length = 719
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 387 VSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKKKLCDGTD 542
+ ++YEK S +F + + EKL+ + ++D R+ ++K+ DG D
Sbjct: 275 LGIKYEKVTYTSDYFPELMDMAEKLMREGKAYVDDTPRE--QMQKERMDGID 324
>At1g72320.3 68414.m08362 pumilio/Puf RNA-binding domain-containing
protein contains Pfam profile: PF00806 Pumilio-family
RNA binding domains (aka PUM-HD, Pumilio homology
domain) (5 copies)
Length = 731
Score = 27.9 bits (59), Expect = 7.6
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = +3
Query: 45 EGFDIARNKSLEVLESMK-ISIEIARENLVDVARTSLKTKV-----HPSLADVLTDACVD 206
EGF I N + E+LESMK S E +++VA SL ++ SL ++ D C +
Sbjct: 316 EGFHIETNVAKEILESMKDNSFSHLVEVILEVAPESLYNEMFNKVFKNSLFELSVDRCAN 375
Query: 207 AVL 215
V+
Sbjct: 376 FVI 378
>At1g72320.2 68414.m08361 pumilio/Puf RNA-binding domain-containing
protein contains Pfam profile: PF00806 Pumilio-family
RNA binding domains (aka PUM-HD, Pumilio homology
domain) (5 copies)
Length = 731
Score = 27.9 bits (59), Expect = 7.6
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = +3
Query: 45 EGFDIARNKSLEVLESMK-ISIEIARENLVDVARTSLKTKV-----HPSLADVLTDACVD 206
EGF I N + E+LESMK S E +++VA SL ++ SL ++ D C +
Sbjct: 316 EGFHIETNVAKEILESMKDNSFSHLVEVILEVAPESLYNEMFNKVFKNSLFELSVDRCAN 375
Query: 207 AVL 215
V+
Sbjct: 376 FVI 378
>At1g72320.1 68414.m08363 pumilio/Puf RNA-binding domain-containing
protein contains Pfam profile: PF00806 Pumilio-family
RNA binding domains (aka PUM-HD, Pumilio homology
domain) (5 copies)
Length = 753
Score = 27.9 bits (59), Expect = 7.6
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = +3
Query: 45 EGFDIARNKSLEVLESMK-ISIEIARENLVDVARTSLKTKV-----HPSLADVLTDACVD 206
EGF I N + E+LESMK S E +++VA SL ++ SL ++ D C +
Sbjct: 338 EGFHIETNVAKEILESMKDNSFSHLVEVILEVAPESLYNEMFNKVFKNSLFELSVDRCAN 397
Query: 207 AVL 215
V+
Sbjct: 398 FVI 400
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,257,419
Number of Sequences: 28952
Number of extensions: 263081
Number of successful extensions: 737
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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