Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0468
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    24   1.5  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    24   1.5  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   2.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   2.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   6.0  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   8.0  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   8.0  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   8.0  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   8.0  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
 Frame = +2

Query: 347 YWSSRSGLPQFRSFPTX--ALRSRVAWCKLRCDPPSSMCCSLPTSTSSRIRE 496
           Y+ +   + Q+   PT    LR    W K +CD      CSLP S +   RE
Sbjct: 445 YFVTNLQVIQWMQNPTELNGLRDFQEW-KEKCDIKGQPYCSLPNSCALTTRE 495


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
 Frame = +2

Query: 347 YWSSRSGLPQFRSFPTX--ALRSRVAWCKLRCDPPSSMCCSLPTSTSSRIRE 496
           Y+ +   + Q+   PT    LR    W K +CD      CSLP S +   RE
Sbjct: 452 YFVTNLQVIQWMQNPTELNGLRDFQEW-KEKCDIKGQPYCSLPNSCALTTRE 502


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 194 YSTIILMEFWPTRWAWVRPFRLLH 265
           +  I L E W +R++W + F + H
Sbjct: 143 FMLIALGEHWLSRYSWAKVFLVEH 166


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 194 YSTIILMEFWPTRWAWVRPFRLLH 265
           +  I L E W +R++W + F + H
Sbjct: 143 FMLIALGEHWLSRYSWAKVFLVEH 166


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = -3

Query: 595 CSECLVLVLVCSDDFSSDDLRQLSCTSIVPWRELP 491
           C  C  +    +  +S+DD   +    +VP +E+P
Sbjct: 798 CKNCARVDYSMNGTYSADDEVPMLLHGVVPRKEIP 832


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 133 ILVNGNLKEYQIKGLEWLVSLFN 201
           +LVN +     +K   WLV+ FN
Sbjct: 305 LLVNFDCSTMWLKDPSWLVNAFN 327


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -3

Query: 376 LWEPTSRTPIP 344
           +++PT RTP+P
Sbjct: 459 VFDPTERTPVP 469


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 306 LSNYRTVEYSFKLGIGVRE 362
           LSNYR V+ S K   G +E
Sbjct: 504 LSNYRNVDNSAKFKDGFQE 522


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 436 RSTKFNVLLTTYEYVI 483
           RST F +L TT  Y+I
Sbjct: 350 RSTLFGILATTTTYLI 365


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.133    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,956
Number of Sequences: 336
Number of extensions: 3927
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)