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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0468
         (750 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|...   329   2e-91
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22...   328   5e-91
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo...   195   6e-51
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac...   192   5e-50
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo...   189   3e-49
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo...   179   5e-46
SPAC20G8.08c |fft1||fun thirty related protein Fft1|Schizosaccha...   158   7e-40
SPAC25A8.01c ||snf2SR|fun thirty related protein Fft3|Schizosacc...   155   8e-39
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha...   151   1e-37
SPBC1826.01c |mot1||TATA-binding protein associated factor Mot1|...   146   4e-36
SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyce...   138   8e-34
SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomy...    73   7e-26
SPAC15A10.03c |rhp54|rad54|Rad54 homolog Rhp54|Schizosaccharomyc...    88   1e-18
SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog Rhp16|Schizo...    87   2e-18
SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces p...    87   3e-18
SPAC22F3.03c |rdh54|tid1, mug34|ATP-dependent DNA helicase Rdh54...    84   2e-17
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po...    83   3e-17
SPBC582.10c |||ATP-dependent DNA helicase Rhp16b |Schizosaccharo...    81   2e-16
SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Sch...    69   9e-13
SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces pom...    45   1e-05
SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr 2...    32   0.10 
SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase Ub...    29   0.94 
SPCC1393.07c |mug4||sequence orphan|Schizosaccharomyces pombe|ch...    28   1.2  
SPBC29A3.18 |cyt1||cytochrome c1|Schizosaccharomyces pombe|chr 2...    28   1.6  
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb...    28   1.6  
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c...    27   2.2  
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe...    27   3.8  
SPAC22E12.10c |etp1|cox15|mitochondrial type I [2Fe-2S] ferredox...    26   5.0  
SPCC622.03c |||dubious|Schizosaccharomyces pombe|chr 3|||Manual        26   6.6  
SPCC1795.06 |map2||P-factor |Schizosaccharomyces pombe|chr 3|||M...    25   8.7  
SPBC1271.03c |||phosphoprotein phosphatase|Schizosaccharomyces p...    25   8.7  
SPBC28E12.03 |rga4||GTPase activating protein Rga4|Schizosacchar...    25   8.7  

>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
            Snf21|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1199

 Score =  329 bits (809), Expect = 2e-91
 Identities = 146/242 (60%), Positives = 192/242 (79%)
 Frame = +1

Query: 25   DMIKKAKVEDDEYKTEEQTYYSIAHTVHESVTEQASILVNGNLKEYQIKGLEWLVSLFNN 204
            DM ++   EDD     +  YY++AH + E VTEQ SILV G LKEYQ++GL+W++SL+NN
Sbjct: 379  DMDRRMNPEDDR----KIDYYNVAHNIREVVTEQPSILVGGKLKEYQLRGLQWMISLYNN 434

Query: 205  NLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPYLIIVPLSTLSNWVLEFEKWAPTVSV 384
            +LNGILADEMGLGKTIQTI+L+T+L+EKK+ NGP+L+IVPLSTL+NW +EFE+WAP++  
Sbjct: 435  HLNGILADEMGLGKTIQTISLITHLIEKKRQNGPFLVIVPLSTLTNWTMEFERWAPSIVK 494

Query: 385  VSYXGSPQSRRLVQAQMRSTKFNVLLTTYEYVIKDKGVLAKVQWKYMIIDEGHRMKNHHC 564
            + Y G PQ R+ +  Q+R + F VLLTTYEY+IKD+ +L++++W YMIIDEGHRMKN   
Sbjct: 495  IVYKGPPQVRKALHPQVRHSNFQVLLTTYEYIIKDRPLLSRIKWIYMIIDEGHRMKNTQS 554

Query: 565  KLTQVLNTHYIAPHRLLLTGTPLQNKLPELWALLNFLLPSIFXSWSTFEQWVNAXFATTG 744
            KLT  L T+Y + +RL+LTGTPLQN LPELWALLNF+LP IF S  +F++W N  FA TG
Sbjct: 555  KLTNTLTTYYSSRYRLILTGTPLQNNLPELWALLNFVLPRIFNSIKSFDEWFNTPFANTG 614

Query: 745  GK 750
            G+
Sbjct: 615  GQ 616


>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
            Snf22|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1680

 Score =  328 bits (806), Expect = 5e-91
 Identities = 143/223 (64%), Positives = 185/223 (82%)
 Frame = +1

Query: 82   YYSIAHTVHESVTEQASILVNGNLKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTI 261
            Y+ +AH +HE V EQ  I V G LK+YQ+KGLEW++SL+NNNLNGILADEMGLGKTIQTI
Sbjct: 847  YFKVAHRIHEEV-EQPKIFVGGTLKDYQLKGLEWMLSLYNNNLNGILADEMGLGKTIQTI 905

Query: 262  ALVTYLMEKKKVNGPYLIIVPLSTLSNWVLEFEKWAPTVSVVSYXGSPQSRRLVQAQMRS 441
            A +TYL+EKK   GP+LIIVPLSTL+NW++EFEKWAP+V  ++Y G PQ R+ +Q+Q+RS
Sbjct: 906  AFITYLIEKKNQQGPFLIIVPLSTLTNWIMEFEKWAPSVKKIAYKGPPQLRKTLQSQIRS 965

Query: 442  TKFNVLLTTYEYVIKDKGVLAKVQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLT 621
            + FNVLLTT+EY+IKD+ +L++++W +MIIDEGHR+KN   KLT  L+T+Y + +RL+LT
Sbjct: 966  SNFNVLLTTFEYIIKDRPLLSRIKWVHMIIDEGHRIKNTQSKLTSTLSTYYHSQYRLILT 1025

Query: 622  GTPLQNKLPELWALLNFLLPSIFXSWSTFEQWVNAXFATTGGK 750
            GTPLQN LPELWALLNF+LP IF S  +F++W N  FA TGG+
Sbjct: 1026 GTPLQNNLPELWALLNFVLPKIFNSIKSFDEWFNTPFANTGGQ 1068


>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase
           Hrp3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1388

 Score =  195 bits (475), Expect = 6e-51
 Identities = 91/220 (41%), Positives = 141/220 (64%), Gaps = 6/220 (2%)
 Frame = +1

Query: 49  EDDEYKTEEQTYYSIAHTVHESVTEQASILVNGNLKEYQIKGLEWLVSLFNNNLNGILAD 228
           E+        T Y  +   +  + +Q S +  G L+++Q+ G+ W+  L++ N NGILAD
Sbjct: 341 EESALSPSRGTNYGNSRPKYRKLEQQPSYITGGELRDFQLTGVNWMAYLWHKNENGILAD 400

Query: 229 EMGLGKTIQTIALVTYLMEKKKVNGPYLIIVPLSTLSNWVLEFEKWAPTVSVVSYXGSPQ 408
           EMGLGKT+QT+A ++YL    + +GP+L++VPLST+  W      WA  ++ +SY G+  
Sbjct: 401 EMGLGKTVQTVAFLSYLAHSLRQHGPFLVVVPLSTVPAWQETLALWASDMNCISYLGNTT 460

Query: 409 SRRLVQAQ------MRSTKFNVLLTTYEYVIKDKGVLAKVQWKYMIIDEGHRMKNHHCKL 570
           SR++++         +  KFN+LLTTYEYV+KD+ VL+ ++W+YM IDE HR+KN    L
Sbjct: 461 SRQVIRDYEFYVDGTQKIKFNLLLTTYEYVLKDRSVLSNIKWQYMAIDEAHRLKNSESSL 520

Query: 571 TQVLNTHYIAPHRLLLTGTPLQNKLPELWALLNFLLPSIF 690
            + L + +   +RLL+TGTPLQN + EL AL++FL+P  F
Sbjct: 521 YEAL-SQFKNSNRLLITGTPLQNNIRELAALVDFLMPGKF 559


>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
            Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1373

 Score =  192 bits (468), Expect = 5e-50
 Identities = 90/221 (40%), Positives = 139/221 (62%), Gaps = 7/221 (3%)
 Frame = +1

Query: 49   EDDEYKTEEQTYYSIAHTVHESVTEQASILVNGNLKEYQIKGLEWLVSLFNNNLNGILAD 228
            E+  Y   +  +Y+     +  + +Q S +  G ++++Q+ G+ W+  L++ N NGILAD
Sbjct: 357  ENSPYLPYKGVFYN-TRPPYRKLEKQPSYIKGGEIRDFQLTGINWMAYLWHRNENGILAD 415

Query: 229  EMGLGKTIQTIALVTYLMEKKKVNGPYLIIVPLSTLSNWVLEFEKWAPTVSVVSYXGSPQ 408
            EMGLGKT+QT+  ++YL+   K +GP+LI+VPLST+  W      W P ++ + Y G+ +
Sbjct: 416  EMGLGKTVQTVCFLSYLVHSLKQHGPFLIVVPLSTVPAWQETLANWTPDLNSICYTGNTE 475

Query: 409  SRRLVQ-------AQMRSTKFNVLLTTYEYVIKDKGVLAKVQWKYMIIDEGHRMKNHHCK 567
            SR  ++          R  KFN+LLTTYEY++KDK  L  ++W+Y+ IDE HR+KN    
Sbjct: 476  SRANIREYEFYLSTNSRKLKFNILLTTYEYILKDKQELNNIRWQYLAIDEAHRLKNSESS 535

Query: 568  LTQVLNTHYIAPHRLLLTGTPLQNKLPELWALLNFLLPSIF 690
            L + L + +   +RLL+TGTPLQN L EL +L+NFL+P  F
Sbjct: 536  LYETL-SQFRTANRLLITGTPLQNNLKELASLVNFLMPGKF 575


>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
            Swr1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1288

 Score =  189 bits (461), Expect = 3e-49
 Identities = 96/206 (46%), Positives = 136/206 (66%), Gaps = 8/206 (3%)
 Frame = +1

Query: 124  QASILVNGNLKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNG 303
            Q   L  G L+EYQ  GLEWL +L ++N NGILADEMGLGKTIQTIAL+ +L  +K+  G
Sbjct: 438  QVPFLFRGTLREYQQYGLEWLTALHDSNTNGILADEMGLGKTIQTIALLAHLACEKENWG 497

Query: 304  PYLIIVPLSTLSNWVLEFEKWAPTVSVVSYXGSPQSRRLVQA-QMRSTKFNVLLTTYEYV 480
            P+LIIVP S + NW +EF+K+ P   +++Y G+PQ R+  ++   +   ++V +T+Y+ V
Sbjct: 498  PHLIIVPTSVMLNWEMEFKKFLPGFKILTYYGNPQERKEKRSGWYKPDTWHVCITSYQLV 557

Query: 481  IKDKGVLAKVQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQNKLPELWA 660
            ++D     + +W+YMI+DE H +KN   +  Q L  ++ A HRLLLTGTPLQN L ELW+
Sbjct: 558  LQDHQPFRRKKWQYMILDEAHNIKNFRSQRWQSL-LNFNAEHRLLLTGTPLQNNLVELWS 616

Query: 661  LLNFLLP-------SIFXSWSTFEQW 717
            LL FL+P       S F +   F+ W
Sbjct: 617  LLYFLMPAGVTQNNSAFANLKDFQDW 642


>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
            Ino80|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1604

 Score =  179 bits (435), Expect = 5e-46
 Identities = 83/197 (42%), Positives = 128/197 (64%), Gaps = 8/197 (4%)
 Frame = +1

Query: 151  LKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPYLIIVPLS 330
            LKEYQ+KGL WL +L+   +NGILADEMGLGKT+Q+I+++ YL E   + GP+L+I P S
Sbjct: 842  LKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSISVMAYLAETHNIWGPFLVIAPAS 901

Query: 331  TLSNWVLEFEKWAPTVSVVSYXGSPQSRRLVQ--------AQMRSTKFNVLLTTYEYVIK 486
            TL NW  E  ++ P +  + Y GS + R++++            ++ F+V++T+Y+ V+ 
Sbjct: 902  TLHNWQQEITRFVPKLKCIPYWGSTKDRKILRKFWCRKNMTYDENSPFHVVVTSYQLVVL 961

Query: 487  DKGVLAKVQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQNKLPELWALL 666
            D      V+W+YMI+DE   +K+      + L   +   +RLLLTGTP+QN + ELWALL
Sbjct: 962  DAQYFQSVKWQYMILDEAQAIKSSSSSRWKSL-LAFKCRNRLLLTGTPIQNTMQELWALL 1020

Query: 667  NFLLPSIFXSWSTFEQW 717
            +F++PS+F S + F +W
Sbjct: 1021 HFIMPSLFDSHNEFSEW 1037


>SPAC20G8.08c |fft1||fun thirty related protein
            Fft1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 944

 Score =  158 bits (384), Expect = 7e-40
 Identities = 91/216 (42%), Positives = 128/216 (59%), Gaps = 4/216 (1%)
 Frame = +1

Query: 55   DEYKTEEQTYYSIAHTVHESVTEQASILVNG-NLKEYQIKGLEWLVSLFNNNLNGILADE 231
            D+ K E+    S     +E  ++Q S + +G  LK YQI GL WL  ++   L+GILADE
Sbjct: 381  DDKKMEQFLNTSTGSISYEYNSQQPSSIASGITLKSYQIVGLNWLCLMYKAKLSGILADE 440

Query: 232  MGLGKTIQTIALVTYLMEKKKVNGPYLIIVPLSTLSNWVLEFEKWAPTVSVVSYXGSPQS 411
            MGLGKT Q I+ +  L EK  +   +L++VP STL NW+ EFEK+ P++ V SY G+   
Sbjct: 441  MGLGKTCQVISFLASLKEKG-IQNRHLVVVPSSTLGNWLREFEKFCPSLRVESYSGTQSE 499

Query: 412  RRLVQAQMRSTKFNVLLTTYEYVI---KDKGVLAKVQWKYMIIDEGHRMKNHHCKLTQVL 582
            R   +  +  T F+VL+TTY+       D+  L K ++   I DEGH +KN   +  + L
Sbjct: 500  RINKRYYLMDTDFDVLVTTYQLASGSRDDRSFLRKQRFDISIFDEGHYLKNRMSERYKHL 559

Query: 583  NTHYIAPHRLLLTGTPLQNKLPELWALLNFLLPSIF 690
              +  A  RLL+TGTPLQN L EL +LL F+LP +F
Sbjct: 560  -MNIPANFRLLITGTPLQNNLKELISLLAFMLPKVF 594


>SPAC25A8.01c ||snf2SR|fun thirty related protein
           Fft3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 922

 Score =  155 bits (375), Expect = 8e-39
 Identities = 86/196 (43%), Positives = 118/196 (60%), Gaps = 5/196 (2%)
 Frame = +1

Query: 118 TEQASILVNGNLKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKV 297
           T  AS   +  L++YQI G+ WL  L+   L GILADEMGLGKT QTIA  + LM+ K +
Sbjct: 376 TPPASFSPDIKLQDYQIIGINWLYLLYELKLAGILADEMGLGKTCQTIAFFSLLMD-KNI 434

Query: 298 NGPYLIIVPLSTLSNWVLEFEKWAPTVSVVSYXGSPQSRRLVQAQMRSTK--FNVLLTTY 471
           NGP+L+I P ST+ NW+ EF K+ P + +  Y GS   R  ++ ++ S K  +NV+LTTY
Sbjct: 435 NGPHLVIAPASTMENWLREFAKFCPKLKIELYYGSQVEREEIRERINSNKDSYNVMLTTY 494

Query: 472 EYVIKDKG---VLAKVQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQNK 642
                 K     L   ++   + DEGH +KN   +  + L +   A  R+LLTGTPLQN 
Sbjct: 495 RLAATSKADRLFLRNQKFNVCVYDEGHYLKNRASERYRHLMS-IPADFRVLLTGTPLQNN 553

Query: 643 LPELWALLNFLLPSIF 690
           L EL +LL F+LP +F
Sbjct: 554 LKELISLLAFILPHVF 569


>SPCC1235.05c |fft2||fun thirty related protein
            Fft2|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1284

 Score =  151 bits (365), Expect = 1e-37
 Identities = 84/201 (41%), Positives = 122/201 (60%), Gaps = 7/201 (3%)
 Frame = +1

Query: 115  VTEQASILVNG-NLKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKK 291
            VTEQ   L +   LK YQ+ G+ WL  L+   L+GILADEMGLGKT Q +A    L+E+ 
Sbjct: 537  VTEQPKTLASDVQLKSYQLVGVNWLHLLYQQKLSGILADEMGLGKTCQVVAFFALLLEQG 596

Query: 292  KVNGPYLIIVPLSTLSNWVLEFEKWAPTVSVVSYXGSPQSRRLVQAQMRST--KFNVLLT 465
              +GP+L++VP STL NW+ E  ++ P++ V  Y GS Q R  ++  +     K+++L+T
Sbjct: 597  H-HGPHLVVVPSSTLENWLRELARFCPSLRVEPYYGSQQERANIREAIEENEIKYDILVT 655

Query: 466  TYEYVI---KDKGVLAKVQWKYMIIDEGHRMKNHHC-KLTQVLNTHYIAPHRLLLTGTPL 633
            TY+      +D+  L    +   + DEGH +KN    +   ++N +  A  RLLLTGTPL
Sbjct: 656  TYQLATNNKEDRSFLKHQNFDVCVYDEGHYLKNRMSERYKHLMNLN--ANFRLLLTGTPL 713

Query: 634  QNKLPELWALLNFLLPSIFXS 696
            QN L EL +LL F+LP++F S
Sbjct: 714  QNNLKELVSLLAFILPNMFDS 734


>SPBC1826.01c |mot1||TATA-binding protein associated factor
            Mot1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1953

 Score =  146 bits (353), Expect = 4e-36
 Identities = 75/203 (36%), Positives = 122/203 (60%), Gaps = 11/203 (5%)
 Frame = +1

Query: 139  VNGNLKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVT---YLMEK------- 288
            ++ +L++YQ +G+ WL  L    L+GIL D+MGLGKT+QTI +V    Y  +K       
Sbjct: 1354 ISADLRKYQQEGVNWLAFLNKYELHGILCDDMGLGKTLQTICIVASDHYNRQKLFEESGS 1413

Query: 289  -KKVNGPYLIIVPLSTLSNWVLEFEKWAPTVSVVSYXGSPQSRRLVQAQMRSTKFNVLLT 465
             K  + P LI+ P +   +W  E   +AP + V +Y G P  R  ++++M+  K +V++T
Sbjct: 1414 PKFAHVPSLIVCPSTLAGHWQQELSTYAPFLKVSAYVGPPAERAKIRSKMK--KSDVVVT 1471

Query: 466  TYEYVIKDKGVLAKVQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQNKL 645
            +Y+    D   L K+ W Y ++DEGH +KN   KLT+ + +   + HRL+L+GTP+QN +
Sbjct: 1472 SYDICRNDVDELVKIDWNYCVLDEGHVIKNARAKLTKAVKS-LRSYHRLILSGTPIQNNV 1530

Query: 646  PELWALLNFLLPSIFXSWSTFEQ 714
             ELW+L +FL+P    +  TF++
Sbjct: 1531 LELWSLFDFLMPGFLGTEKTFQE 1553


>SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyces
            pombe|chr 2|||Manual
          Length = 1418

 Score =  138 bits (334), Expect = 8e-34
 Identities = 79/193 (40%), Positives = 113/193 (58%), Gaps = 7/193 (3%)
 Frame = +1

Query: 124  QASILVNGNLKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNG 303
            Q S +  G L  YQ+KGL WL   +  +   ILADEMGLGKT+Q I+ ++ L  + K   
Sbjct: 547  QPSFIKGGTLMPYQLKGLNWLYLRWYTHHPCILADEMGLGKTVQVISFISVLFYRHKC-F 605

Query: 304  PYLIIVPLSTLSNWVLEFEKWAPTVSVVSYXGSPQSRRLV-------QAQMRSTKFNVLL 462
            P L+IVP +T++NW  E +KWAP + +    GS ++R LV       Q   +    +VL+
Sbjct: 606  PVLVIVPHATVANWERELKKWAPFLQINVLVGSEKNRSLVRDYRLINQKDPKHVSTHVLV 665

Query: 463  TTYEYVIKDKGVLAKVQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQNK 642
             +   V ++  +L K QWK +I+DEG R+KN    L   L++   +  +LLLTGTPLQN 
Sbjct: 666  ISASNVEREISLLRKFQWKVLIVDEGQRLKNDQSSLFYYLSS-VKSDFKLLLTGTPLQNN 724

Query: 643  LPELWALLNFLLP 681
            + EL+ LL FL P
Sbjct: 725  VRELFNLLQFLNP 737


>SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 973

 Score = 72.5 bits (170), Expect(2) = 7e-26
 Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 6/146 (4%)
 Frame = +1

Query: 22  RDMIKKAKVEDDEYKTEEQTYYSIAHTVHESVTEQASILVNGNLK----EYQIKGLEWLV 189
           RD    ++   D  + E +  + + H   +  T +    + G+++     YQ+  ++WL 
Sbjct: 230 RDQASASENNKDRGEFEGKDEWLLPHPSKKGQTFEGGFTIPGDIRPHLFRYQVTCVQWLW 289

Query: 190 SLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPYLIIVPLSTLSNWVLEFEK-W 366
            L+     GI+ DEMGLGKTIQ ++ ++ L    K   P LI+ P + +  WV EF   W
Sbjct: 290 ELYCQEAGGIIGDEMGLGKTIQIVSFLSSLHHSGKFQKPALIVCPATLMKQWVNEFHTWW 349

Query: 367 AP-TVSVVSYXGSPQSRRLVQAQMRS 441
           AP  V V+   GS Q     + Q  S
Sbjct: 350 APLRVVVLHATGSGQRASREKRQYES 375



 Score = 60.5 bits (140), Expect(2) = 7e-26
 Identities = 27/90 (30%), Positives = 53/90 (58%)
 Frame = +1

Query: 442 TKFNVLLTTYEYVIKDKGVLAKVQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLT 621
           T+ ++L+TTY  +     ++   +W Y ++DEGH+++N   +++ +        +R++L+
Sbjct: 411 TRGHILITTYAGLRIYGDLILPREWGYCVLDEGHKIRNPDSEIS-ISCKQIRTVNRIILS 469

Query: 622 GTPLQNKLPELWALLNFLLPSIFXSWSTFE 711
           GTP+QN L ELW L +F+ P    +   F+
Sbjct: 470 GTPIQNNLTELWNLFDFVFPGRLGTLPVFQ 499


>SPAC15A10.03c |rhp54|rad54|Rad54 homolog Rhp54|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 852

 Score = 87.8 bits (208), Expect = 1e-18
 Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
 Frame = +1

Query: 151 LKEYQIKGLEWLVSLFNNNL----NG-ILADEMGLGKTIQTIALV-TYLMEKKKVNGPYL 312
           L+ +QI+G+++L       +    NG I+ADEMGLGKT+Q IAL+ T L +  +   P +
Sbjct: 264 LRPHQIEGVKFLYKCVTGRIDRCANGCIMADEMGLGKTLQCIALLWTLLKQSPQAGKPTI 323

Query: 313 ----IIVPLSTLSNWVLEFEKWAPTVSVVSYX--GSPQSRRLVQAQM-------RSTKFN 453
               I  P S + NW  E  KW    ++  +   G    + L+ A         R     
Sbjct: 324 EKAIITCPSSLVKNWANELVKWLGKDAITPFILDGKSSKQELIMALQQWASVHGRQVTRP 383

Query: 454 VLLTTYEYVIKDKGVLAKVQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTGTPL 633
           VL+ +YE +      L   +   ++ DEGHR+KN    LT           R++L+GTP+
Sbjct: 384 VLIASYETLRSYVEHLNNAEIGMLLCDEGHRLKNSD-SLTFTALDKLNVQRRVILSGTPI 442

Query: 634 QNKLPELWALLNFLLPSIFXSWSTFEQ 714
           QN L E ++LLNF  P +  S   F +
Sbjct: 443 QNDLSEYFSLLNFANPGLLGSRQEFRK 469


>SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog
           Rhp16|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 963

 Score = 87.4 bits (207), Expect = 2e-18
 Identities = 61/191 (31%), Positives = 101/191 (52%), Gaps = 15/191 (7%)
 Frame = +1

Query: 148 NLKEYQIKGLEWLVSLFNNNLNG-ILADEMGLGKTIQTIALVTYLMEKKKVNGPYLIIVP 324
           NL  +Q +G+ WL    +++  G ILADEMG+GKTIQTIAL+  L E +    P L++ P
Sbjct: 356 NLLPFQREGVYWLKRQEDSSFGGGILADEMGMGKTIQTIALL--LSEPR--GKPTLVVAP 411

Query: 325 LSTLSNWVLEFEKWA-PTVSVVSYXGSPQS---RRLVQAQMRSTKFNVLLTTYEY----- 477
           +  +  W  E +      +S   Y G  +      L    +  T +NV+ + Y       
Sbjct: 412 VVAIMQWKEEIDTHTNKALSTYLYYGQARDISGEELSSYDVVLTSYNVIESVYRKERSGF 471

Query: 478 -----VIKDKGVLAKVQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQNK 642
                V+K+K +L ++++  +I+DE H +K+  C   + +        ++ L+GTPLQN+
Sbjct: 472 RRKNGVVKEKSLLHQMEFYRIILDEAHGIKSRTCNTARAV-CGLRTTRKICLSGTPLQNR 530

Query: 643 LPELWALLNFL 675
           + EL++LL FL
Sbjct: 531 IGELFSLLRFL 541


>SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces
            pombe|chr 2|||Manual
          Length = 1040

 Score = 87.0 bits (206), Expect = 3e-18
 Identities = 75/249 (30%), Positives = 122/249 (48%), Gaps = 25/249 (10%)
 Frame = +1

Query: 43   KVEDDEYKTEEQTYYSIAHTV--HESVTEQASILVNGNLKEYQIKGLEWLVSLFNNNLNG 216
            KV+DD+ +  E+ +  +   +    ++ E     +   L E+Q +GL WL  L  ++  G
Sbjct: 352  KVQDDQQQQLEELFKDLDEQLVNDPTIREGTPAGLIPTLMEHQKEGLMWLKRLEESSKKG 411

Query: 217  -ILADEMGLGKTIQTIAL-VTYLMEKKKVNGPYLIIVPLSTLSNWVLEF-EKWAPT--VS 381
             ILAD+MGLGKT+Q +AL VT   E K V    LII P+S L  W  E   K AP+   +
Sbjct: 412  GILADDMGLGKTVQALALLVTRPPESKSVKTT-LIITPVSLLQQWHNEILTKIAPSHRPT 470

Query: 382  VVSYXGSPQSRRLVQAQMRS----TKFNVLL------TTYEYVIKDKGVLAK-------- 507
            V  + GS +  ++ +  M      T +NV+         Y+  I+D   + K        
Sbjct: 471  VYIHHGSSKKHKIAEQLMSYDIVLTTYNVIAYEFKNKMAYDKSIEDNAPIKKFEHLPFFE 530

Query: 508  VQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQNKLPELWALLNFLLPSI 687
             +W  +I+DE   +KN +    +       + +R  L+GTP+QN + E ++L+ FL    
Sbjct: 531  AEWYRVILDEAQTIKNRNTLAARGCCL-LESTYRWCLSGTPMQNGVEEFYSLIKFLRIKP 589

Query: 688  FXSWSTFEQ 714
            +  WS+F +
Sbjct: 590  YSDWSSFSK 598


>SPAC22F3.03c |rdh54|tid1, mug34|ATP-dependent DNA helicase
           Rdh54|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 811

 Score = 84.2 bits (199), Expect = 2e-17
 Identities = 54/174 (31%), Positives = 88/174 (50%), Gaps = 7/174 (4%)
 Frame = +1

Query: 211 NGILADEMGLGKTIQTIALV------TYLMEKKKVNGPYLIIVPLSTLSNWVLEFEKWAP 372
           + ILADEMGLGKT+QTI +V      +Y   +       +++ P++ L NW  EF  W  
Sbjct: 230 SAILADEMGLGKTLQTITVVWTLLKQSYYANRSSTINNAMVVAPVTLLKNWENEFYNWLG 289

Query: 373 TVSVVSYXGSPQSRRLVQAQMRSTKFNVLLTTYEYVIKD-KGVLAKVQWKYMIIDEGHRM 549
              +  Y    +     Q    +  +++++T YE V    +     +    +I DE HR+
Sbjct: 290 HERIHVYIA--RCAEDFQEFTSNKTYSIIITGYETVCTYLRNYGCGIDIDLLICDEAHRL 347

Query: 550 KNHHCKLTQVLNTHYIAPHRLLLTGTPLQNKLPELWALLNFLLPSIFXSWSTFE 711
           K+   +    LN       RLLLTGTPLQN L E ++++NF++P    + ++F+
Sbjct: 348 KSMSSQTWITLNK-LKTRKRLLLTGTPLQNDLSEYFSMVNFIIPGSLGTPNSFK 400


>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 897

 Score = 83.4 bits (197), Expect = 3e-17
 Identities = 63/217 (29%), Positives = 107/217 (49%), Gaps = 21/217 (9%)
 Frame = +1

Query: 121 EQASILVNGNLKEYQIKGLEWLVSLFNNN-LNGILADEMGLGKTIQTIALVTYLMEKKKV 297
           + A +LV+  L  +Q++G  W+ S+  ++   G++AD+MGLGKTIQTIAL+     +  +
Sbjct: 242 QSAGLLVS--LLPHQVEGHAWMESMEQSSKCGGVMADDMGLGKTIQTIALLLTQKSQDPL 299

Query: 298 NGPYLIIVPLSTLSNWVLEFE-KWAPTVSVVSYXGSPQSRRLVQAQMRSTKFNVLLTTYE 474
               LI+V ++ L  W  E   K  P+  +  Y     +++ + +   S +++V+LTTY 
Sbjct: 300 RKTNLIVVSVALLHQWAEELSTKVHPSKKLSVYIHHGSTKKNLDSYELS-QYDVVLTTYS 358

Query: 475 ---YVIKDKGV----------------LAKVQWKYMIIDEGHRMKNHHCKLTQVLNTHYI 597
              Y +K                    L +  W  +++DE H ++N    L         
Sbjct: 359 MLAYEMKQNDAFNNNNPATATPPPACSLLETSWYRIVLDEAHTIRNRD-TLAAKCCVKLD 417

Query: 598 APHRLLLTGTPLQNKLPELWALLNFLLPSIFXSWSTF 708
           A +R  L+GTP+QN + E ++LL FL    +  WS F
Sbjct: 418 AKYRWCLSGTPIQNHIDEFYSLLKFLRIKPYCVWSLF 454


>SPBC582.10c |||ATP-dependent DNA helicase Rhp16b
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 830

 Score = 80.6 bits (190), Expect = 2e-16
 Identities = 69/236 (29%), Positives = 121/236 (51%), Gaps = 31/236 (13%)
 Frame = +1

Query: 109 ESVTEQASILVNGNLK--EYQIKGLEWLVSLF----NNNLNGILADEMGLGKTIQTIALV 270
           +S+  Q+S +   +++  ++Q++GL WL S      ++   GILAD+MGLGKTIQ IAL+
Sbjct: 217 DSMQRQSSFIPGMHIRLLDHQVQGLTWLKSRETVSKSSASGGILADDMGLGKTIQMIALI 276

Query: 271 -TYLMEKKKVN-GPYLIIVPLSTLSNWVLEFEKWAPTVSVVSYXGSPQSRRLVQAQMRST 444
            ++ + KKK +    L++ PLS +  W  E +  +   ++V Y G+ + + L        
Sbjct: 277 LSHPLPKKKHSIKSTLVVAPLSLIKQWESEVQTKSKLTAIV-YHGASRYKLLKVIH---- 331

Query: 445 KFNVLLTTYEYVI-----------------------KDKGVLAKVQWKYMIIDEGHRMKN 555
           +++V++TTY+ ++                       K K  L    W  +I+DE H +KN
Sbjct: 332 EYDVVITTYQILVSEWVSHNTTGTDGKSPTEAKSYEKKKPSLFAFYWWRIILDEAHTIKN 391

Query: 556 HHCKLTQVLNTHYIAPHRLLLTGTPLQNKLPELWALLNFLLPSIFXSWSTFEQWVN 723
              K + +        +R  LTGTPLQN + EL++L+ FL  + F   S ++  ++
Sbjct: 392 KSSK-SALACCALQGINRWCLTGTPLQNNVDELYSLVKFLHINPFNDQSVWKDQIS 446


>SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1133

 Score = 68.5 bits (160), Expect = 9e-13
 Identities = 54/193 (27%), Positives = 92/193 (47%), Gaps = 25/193 (12%)
 Frame = +1

Query: 214  GILADEMGLGKTIQTIALV-----------TYLMEKKKVNGPY-----LIIVPLSTLSNW 345
            GILADEMGLGKTI+ ++L+                  K + P      L++ P+S L  W
Sbjct: 525  GILADEMGLGKTIEVLSLIHSRPCFSTDEIPEAFRHSKPSLPVASRTTLVVAPMSLLDQW 584

Query: 346  VLEFEKWAPTVSVVS--YXGSPQSRRLVQAQM-RSTKFNVLLTTYEYVIKD------KGV 498
              E  K +      S  Y GS +   L    +  ST   +++T+Y  ++ +         
Sbjct: 585  HSEACKVSQGTKFRSMIYYGSEKPLDLKSCVIDTSTAPLIIITSYGVLLSEFSQQSHSSG 644

Query: 499  LAKVQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQNKLPELWALLNFLL 678
            L  V W  +++DEGH ++N   K  +  ++   + +R ++TGTP+ NKL +L++L+ F+ 
Sbjct: 645  LFSVHWFRVVLDEGHNIRNRESKTAKACHS-ISSQNRWVITGTPIVNKLDDLYSLIKFMR 703

Query: 679  PSIFXSWSTFEQW 717
               +  W  +  W
Sbjct: 704  ---YEPWCNYTYW 713


>SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1375

 Score = 45.2 bits (102), Expect = 1e-05
 Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 37/192 (19%)
 Frame = +1

Query: 214 GILADEMGLGKTIQTIALVTY----------------LMEKKKVNGPYLIIVPLSTLSNW 345
           GILADEMG+GKT++ + LV +                + +  K +   LII P + L  W
Sbjct: 286 GILADEMGMGKTLEVLGLVLHHQLPISLTDTCTFDQVVGKNVKYSKATLIITPSTILDQW 345

Query: 346 VLEFEKWAPTVSVVSYXGSPQSRRLVQAQM-----------RSTKFNVLLT-----TYEY 477
           + E +   P++ V  Y G  +S  L  A++              +F +L T     T  +
Sbjct: 346 LSEIDLHVPSLKVFHYQGIRKSNGLKSAKIFLDCDIVVTSYSDLRFELLYTESHSRTLRH 405

Query: 478 V---IKDKGVLAKVQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAP--HRLLLTGTPLQNK 642
               +  K  L  V W  + +DE   ++     + Q++   Y  P  +   ++GTP++++
Sbjct: 406 EKRHVSPKSPLIDVCWWRICVDEAQMVETSQSNVAQMI---YRIPRVNCWTVSGTPVRSE 462

Query: 643 LPELWALLNFLL 678
           + +L+ LL FLL
Sbjct: 463 VDDLFGLL-FLL 473


>SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 470

 Score = 31.9 bits (69), Expect = 0.10
 Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 4/163 (2%)
 Frame = +1

Query: 16  KARDMIKKAKVEDDEYKTEEQTYYSIAHTVHESVTEQASILVNGNLKEYQIKGLEWLVSL 195
           K  +  + +  +D+E    E+     A  + +S + +AS+  + + K Y  K  + +V  
Sbjct: 104 KIAEAAQASNPDDEEEFVMEEDNLGEAPLLVDSESYEASVKADTSRKAYD-KEFKKVVEA 162

Query: 196 FNNNLNGILA-DEMGL-GKTIQTIALVTYLMEKKKVNGPYLI-IVPLSTLSNWVLEFEKW 366
            +  L  + A D  G   K ++   L +   EK+ +     I +VP   L+ WV     +
Sbjct: 163 SDVILYVLDARDPEGTRSKDVERQVLASSAEEKRLIFVINKIDLVPSEVLNKWVTYLRNF 222

Query: 367 APTVSVVSYXGSPQSRRLVQ-AQMRSTKFNVLLTTYEYVIKDK 492
            PT+ + S  GS  S    Q A   ST  N+L +   Y  K K
Sbjct: 223 FPTIPMRSASGSGNSNLKHQSASASSTISNLLKSLKSYSAKKK 265


>SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase
           Ubp21|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1129

 Score = 28.7 bits (61), Expect = 0.94
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 322 PLSTLSNWVLEFEKWAPTVSVVSY 393
           P+S+LS W+ E  KW+  V +  Y
Sbjct: 742 PISSLSEWIREHLKWSSDVPITYY 765


>SPCC1393.07c |mug4||sequence orphan|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 845

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = +2

Query: 338 QTGYWSSRSGLPQFRSFPTXALRSRVAWCKLRCDPPSSMCCSLPTSTSSRIREFSP 505
           +T +WS     PQF +F   ALR R+ + K +   P +  CSL     + + E +P
Sbjct: 286 ETYHWSPFP--PQFSTFNDNALRLRI-YYKPKSWLPKNSSCSLSVDVKATLLETTP 338


>SPBC29A3.18 |cyt1||cytochrome c1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 307

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = -1

Query: 390 GNDRNCGSPLLELQYPV*KSTQRYDN*IRSIHFLLFHEVGDQCNSLNGLTQAHLVG 223
           G  +  G   ++  +P  K    +D+      F ++ EV   C+SLN +   HLVG
Sbjct: 63  GTPKEEGLHFIQHDWPQSKVLSGFDHASLRRGFQVYREVCSACHSLNLIAWRHLVG 118


>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 2386

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 12/46 (26%), Positives = 25/46 (54%)
 Frame = +1

Query: 91  IAHTVHESVTEQASILVNGNLKEYQIKGLEWLVSLFNNNLNGILAD 228
           + H   E+   + +++V+  + +  +   E L   FNN++ GILA+
Sbjct: 831 VPHEKIENALRKVAMIVSQVVNDEDLSNKELLYDFFNNHILGILAE 876


>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 625

 Score = 27.5 bits (58), Expect = 2.2
 Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 6/85 (7%)
 Frame = +3

Query: 360 EVGSHSFGRFLQXLSAVASPGAS------SDAIHQVQCAAHYLRVRHQG*GSSRQGTMEV 521
           E    SFG FL   ++ +S  AS      S ++  V  ++     +     SSR G+   
Sbjct: 487 EASLTSFGNFLGTATSYSSASASYPSTSMSASLSSVHTSSATSSSKSSSSSSSRSGSSSS 546

Query: 522 HDN*RRSSDEKSSLQTNTSTKHSLH 596
             +   S+    S  T TST  S+H
Sbjct: 547 SSSRSGSTSSSGSSHTITSTSQSVH 571


>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 488

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 350 WSSRSGLPQFRSFPTXALRSRVAWC 424
           W +RS +P+F      A    VAWC
Sbjct: 331 WDARSSIPKFTKTNHNAAVKAVAWC 355


>SPAC22E12.10c |etp1|cox15|mitochondrial type I [2Fe-2S] ferredoxin
           Etp1/ cytochrome oxidase cofactor Cox15,
           fusion|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 631

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +2

Query: 380 RSFPTXALRSRVAWCKLRCDPPSSMCCSLPTSTSSRIREFSPRYN 514
           R  P  AL++  +W KL   PP S   S   +   +   F P ++
Sbjct: 463 RLHPEYALKNIRSWTKLISSPPKSSISSSILTQQRQFHTFRPSFH 507


>SPCC622.03c |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 132

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 78  LFLSFIFIVLDFGLFNHISRFIFVGF 1
           LF+SFI  ++   LF  +  FIF GF
Sbjct: 43  LFMSFISFIVSCRLFILVFTFIFKGF 68


>SPCC1795.06 |map2||P-factor |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 201

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +1

Query: 22  RDMIKKAKVEDDEYKTEEQTYYSIAHTVHESVTEQASI 135
           R  +KK   ED+E + E++ YY        +V E ++I
Sbjct: 153 RPNLKKRTEEDEENEEEDEEYYRFLQFYIMTVPENSTI 190


>SPBC1271.03c |||phosphoprotein phosphatase|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 244

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -2

Query: 725 ALTHCSKVDQLLNIDGNRKFSSAQSSGSLFCSGVPVRSRR 606
           +LT+ S+         NRK      +G+L C  + VRS +
Sbjct: 6   SLTYLSQASSCNGATDNRKLVILDLNGTLLCRALAVRSEK 45


>SPBC28E12.03 |rga4||GTPase activating protein
           Rga4|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 933

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 598 RCSECLVLVLVCSDDFSSDDLRQLSC 521
           +C  C   +   S+DFS DD +Q+ C
Sbjct: 50  KCVNCNKKLDPSSEDFSQDDQKQIFC 75


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.317    0.133    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,177,486
Number of Sequences: 5004
Number of extensions: 67893
Number of successful extensions: 249
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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