Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0468
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10642| Best HMM Match : No HMM Matches (HMM E-Value=.) 320 8e-88
SB_7325| Best HMM Match : SNF2_N (HMM E-Value=8.9e-32) 320 8e-88
SB_46817| Best HMM Match : No HMM Matches (HMM E-Value=.) 212 3e-55
SB_31875| Best HMM Match : SNF2_N (HMM E-Value=0) 210 7e-55
SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0) 189 2e-48
SB_248| Best HMM Match : No HMM Matches (HMM E-Value=.) 164 6e-41
SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.) 161 6e-40
SB_621| Best HMM Match : SNF2_N (HMM E-Value=0) 147 1e-35
SB_56223| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 1e-30
SB_21827| Best HMM Match : No HMM Matches (HMM E-Value=.) 123 2e-28
SB_35930| Best HMM Match : SNF2_N (HMM E-Value=1.3004e-42) 98 8e-21
SB_31213| Best HMM Match : SNF2_N (HMM E-Value=0) 86 3e-17
SB_39230| Best HMM Match : SNF2_N (HMM E-Value=1.40004e-41) 67 1e-11
SB_3329| Best HMM Match : SNF2_N (HMM E-Value=1.5e-07) 56 2e-08
SB_44470| Best HMM Match : SNF2_N (HMM E-Value=1.2e-17) 55 7e-08
SB_22405| Best HMM Match : SNF2_N (HMM E-Value=0) 54 1e-07
SB_24486| Best HMM Match : SNF2_N (HMM E-Value=0) 53 3e-07
SB_16800| Best HMM Match : DUF1662 (HMM E-Value=0.095) 53 3e-07
SB_54314| Best HMM Match : DEAD (HMM E-Value=0.48) 52 5e-07
SB_33711| Best HMM Match : PSCyt1 (HMM E-Value=9) 38 0.007
SB_51562| Best HMM Match : HARP (HMM E-Value=0.00049) 36 0.046
SB_55297| Best HMM Match : Drf_FH1 (HMM E-Value=0.74) 32 0.43
SB_7965| Best HMM Match : Galactosyl_T (HMM E-Value=0.2) 30 2.3
SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_40227| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_30500| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_83| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_12769| Best HMM Match : Peptidase_A17 (HMM E-Value=0.00026) 28 9.3
>SB_10642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1023
Score = 320 bits (786), Expect = 8e-88
Identities = 150/223 (67%), Positives = 181/223 (81%), Gaps = 6/223 (2%)
Frame = +1
Query: 1 KTDEYKARDMIKKAKVEDDEYKTEEQT------YYSIAHTVHESVTEQASILVNGNLKEY 162
K+ E R+ K+ +DDE + E + YYSIAH++ E++TEQ S+LV G LKEY
Sbjct: 219 KSKEKSEREKRKELYGKDDEGELESENPQEAINYYSIAHSMKETITEQPSMLVGGRLKEY 278
Query: 163 QIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPYLIIVPLSTLSN 342
Q+ GLEW+VSL NNNLNGILADEMGLGKTIQTIAL +YL+EKK++NGP+L+IVPLSTLSN
Sbjct: 279 QLAGLEWMVSLHNNNLNGILADEMGLGKTIQTIALFSYLIEKKRLNGPFLVIVPLSTLSN 338
Query: 343 WVLEFEKWAPTVSVVSYXGSPQSRRLVQAQMRSTKFNVLLTTYEYVIKDKGVLAKVQWKY 522
W LEFEKWAP+ VVSY GSP RR A +R+ KFNV+LTTYEYV++DK +LAKV+WKY
Sbjct: 339 WQLEFEKWAPSAIVVSYKGSPNMRRSAGAVLRTGKFNVVLTTYEYVMRDKAILAKVRWKY 398
Query: 523 MIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQNKLPE 651
M++DEGHRMKNHHCKLTQVLNTHY A HR+LLTGTPLQ +L E
Sbjct: 399 MVVDEGHRMKNHHCKLTQVLNTHYAAQHRILLTGTPLQVELNE 441
>SB_7325| Best HMM Match : SNF2_N (HMM E-Value=8.9e-32)
Length = 884
Score = 320 bits (786), Expect = 8e-88
Identities = 150/223 (67%), Positives = 181/223 (81%), Gaps = 6/223 (2%)
Frame = +1
Query: 1 KTDEYKARDMIKKAKVEDDEYKTEEQT------YYSIAHTVHESVTEQASILVNGNLKEY 162
K+ E R+ K+ +DDE + E + YYSIAH++ E++TEQ S+LV G LKEY
Sbjct: 650 KSKEKSEREKRKELYGKDDEGELESENPQEAINYYSIAHSMKETITEQPSMLVGGRLKEY 709
Query: 163 QIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPYLIIVPLSTLSN 342
Q+ GLEW+VSL NNNLNGILADEMGLGKTIQTIAL +YL+EKK++NGP+L+IVPLSTLSN
Sbjct: 710 QLAGLEWMVSLHNNNLNGILADEMGLGKTIQTIALFSYLIEKKRLNGPFLVIVPLSTLSN 769
Query: 343 WVLEFEKWAPTVSVVSYXGSPQSRRLVQAQMRSTKFNVLLTTYEYVIKDKGVLAKVQWKY 522
W LEFEKWAP+ VVSY GSP RR A +R+ KFNV+LTTYEYV++DK +LAKV+WKY
Sbjct: 770 WQLEFEKWAPSAIVVSYKGSPNMRRSAGAVLRTGKFNVVLTTYEYVMRDKAILAKVRWKY 829
Query: 523 MIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQNKLPE 651
M++DEGHRMKNHHCKLTQVLNTHY A HR+LLTGTPLQ +L E
Sbjct: 830 MVVDEGHRMKNHHCKLTQVLNTHYAAQHRILLTGTPLQVELNE 872
>SB_46817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 470
Score = 212 bits (517), Expect = 3e-55
Identities = 99/222 (44%), Positives = 151/222 (68%), Gaps = 1/222 (0%)
Frame = +1
Query: 34 KKAKVEDDEYKTEEQTYYSIAHTVHESVTEQASILVNGNLKEYQIKGLEWLVSLFNNNLN 213
++ + E+DE + QT + +H E + + G +++YQ++GL WL+SL+ N +N
Sbjct: 17 RRTEQEEDE-ELLNQTKGAQTSILH--FEESPNYIKGGEMRDYQVRGLNWLISLYENGIN 73
Query: 214 GILADEMGLGKTIQTIALVTYLMEKKKVNGPYLIIVPLSTLSNWVLEFEKWAPTVSVVSY 393
GILADEMGLGKT+QTI+L+ Y+ + V GP+++I P STL+NW+ EFE+W P++ V
Sbjct: 74 GILADEMGLGKTLQTISLLGYMKNFRNVPGPHMVICPKSTLANWMAEFERWCPSIRAVCL 133
Query: 394 XGSPQSR-RLVQAQMRSTKFNVLLTTYEYVIKDKGVLAKVQWKYMIIDEGHRMKNHHCKL 570
G+ + R ++ M +++V +T+YE VI++K V K W+Y++IDE HR+KN KL
Sbjct: 134 IGNQEQRTAFIRDTMLPGEWDVCVTSYEMVIREKAVFKKFAWRYIVIDEAHRIKNEKSKL 193
Query: 571 TQVLNTHYIAPHRLLLTGTPLQNKLPELWALLNFLLPSIFXS 696
++++ + +RLLLTGTPLQN L ELWALLNFLLP +F S
Sbjct: 194 SEIVR-ELRSANRLLLTGTPLQNNLHELWALLNFLLPDVFSS 234
>SB_31875| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1478
Score = 210 bits (514), Expect = 7e-55
Identities = 102/205 (49%), Positives = 143/205 (69%), Gaps = 7/205 (3%)
Frame = +1
Query: 124 QASILVNGNLKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNG 303
Q +L G L+ YQ++G+EWL L+ N +NGILADEMGLGKTIQ I LV+YL+E V G
Sbjct: 804 QPVLLTGGALRSYQLEGVEWLKGLYENGVNGILADEMGLGKTIQCIGLVSYLIE-MGVRG 862
Query: 304 PYLIIVPLSTLSNWVLEFEKWAPTVSVVSYXGSPQSRRLVQAQMRSTK-------FNVLL 462
P+L+ PLSTL NWV EF +++P + V+ Y GS Q R ++ ++ K V++
Sbjct: 863 PFLVAAPLSTLPNWVSEFRRFSPQIPVILYHGSIQERTSLRRKITKLKKAGPFETMPVVV 922
Query: 463 TTYEYVIKDKGVLAKVQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQNK 642
T+YE + D+ L ++ WK+MI+DEGHR+KN +C+L + L + Y + +RLLLTGTPLQN
Sbjct: 923 TSYEIAMNDQKHLFQLMWKHMIVDEGHRIKNLNCRLIRELKS-YNSANRLLLTGTPLQNN 981
Query: 643 LPELWALLNFLLPSIFXSWSTFEQW 717
L ELW+LLNFLLP IF ++F++W
Sbjct: 982 LAELWSLLNFLLPDIFDDLNSFQRW 1006
>SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1918
Score = 189 bits (460), Expect = 2e-48
Identities = 89/202 (44%), Positives = 134/202 (66%), Gaps = 1/202 (0%)
Frame = +1
Query: 115 VTEQASILVNGNLKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKK 294
+ Q L+ G L+EYQ+ GL+WLV++ LNGILADEMGLGKTIQTI+L+ +L +K
Sbjct: 772 IQTQVPFLLRGTLREYQLIGLDWLVTMHEKRLNGILADEMGLGKTIQTISLLAHLACEKG 831
Query: 295 VNGPYLIIVPLSTLSNWVLEFEKWAPTVSVVSYXGSPQSRRLV-QAQMRSTKFNVLLTTY 471
+ GP+L++VP S + NW +EF+KW P +++Y G+ + R+L Q + F+V +T+Y
Sbjct: 832 IWGPHLVVVPTSVMLNWEMEFKKWLPGFKILTYYGNQKERKLKRQGWTKCNAFHVCITSY 891
Query: 472 EYVIKDKGVLAKVQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQNKLPE 651
+ V++D + +WKY I+DE R + +LN + + RLLLTGTPLQN L E
Sbjct: 892 KLVVQDHQAFRRKKWKYFILDESQRWQ-------YLLN--FNSQRRLLLTGTPLQNSLME 942
Query: 652 LWALLNFLLPSIFXSWSTFEQW 717
LW+L++FL+P +F S F++W
Sbjct: 943 LWSLMHFLMPHLFQSHKDFKEW 964
>SB_248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2656
Score = 164 bits (399), Expect = 6e-41
Identities = 91/191 (47%), Positives = 122/191 (63%), Gaps = 5/191 (2%)
Frame = +1
Query: 151 LKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPYLIIVPLS 330
L+EYQ++G+ WL+ + N N ILADEMGLGKTIQ+IA + + M++ + GP L+I PLS
Sbjct: 578 LREYQLEGVNWLMFCWCNRQNSILADEMGLGKTIQSIAFL-FEMQRYGIRGPNLVIAPLS 636
Query: 331 TLSNWVLEFEKWAPTVSVVSYXGSPQSRRLVQAQMRSTKFNVLLTTYEYVIKDKGV---- 498
T+SNW EFE W ++ V Y GS SR L+Q YE+ +D+ V
Sbjct: 637 TISNWQREFESW-NDINAVVYHGSASSRHLIQ-------------EYEFYYRDEHVADNM 682
Query: 499 -LAKVQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQNKLPELWALLNFL 675
L+ V W+ +IIDE HR+KN +CKL + LN + HR+LLTGTPLQN + EL++LLNFL
Sbjct: 683 QLSTVPWRAVIIDEAHRLKNRNCKLLEGLNNLQM-EHRILLTGTPLQNNVEELFSLLNFL 741
Query: 676 LPSIFXSWSTF 708
PS F S F
Sbjct: 742 EPSQFPSQGAF 752
>SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1789
Score = 161 bits (391), Expect = 6e-40
Identities = 91/208 (43%), Positives = 120/208 (57%), Gaps = 20/208 (9%)
Frame = +1
Query: 145 GNLKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPYLIIVP 324
G L EYQ +GL WL + N ILADEMGLGKTIQTI+ + LM++ GP+L+ P
Sbjct: 636 GKLHEYQREGLNWLRFSWAQGTNTILADEMGLGKTIQTISFLYSLMKEGHSQGPFLVSAP 695
Query: 325 LSTLSNWVLEFEKWAPTVSVVSYXGSPQSRRLVQ--------------------AQMRST 444
LSTL NW EFE WAP + VV+Y G +SR ++ +
Sbjct: 696 LSTLVNWEREFEFWAPDMYVVTYAGDKESRATIRNFDFSFDEDAFKSGLKAYKLKKDSPV 755
Query: 445 KFNVLLTTYEYVIKDKGVLAKVQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTG 624
KF+VLLT+YE V D L + W +++DE HR+KN+ K + L+ + I ++LLLTG
Sbjct: 756 KFHVLLTSYELVSIDSASLQSIDWAMLVVDEAHRLKNNQSKFFRTLSDYNIG-YKLLLTG 814
Query: 625 TPLQNKLPELWALLNFLLPSIFXSWSTF 708
TPLQN L ELW LL FL P F + + F
Sbjct: 815 TPLQNNLEELWNLLFFLDPVEFNNKNNF 842
>SB_621| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1432
Score = 147 bits (356), Expect = 1e-35
Identities = 79/188 (42%), Positives = 108/188 (57%)
Frame = +1
Query: 151 LKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPYLIIVPLS 330
L++YQ+ GL WL + + + ILADEMGLGKTIQ I+ ++YL + GP++++VPLS
Sbjct: 127 LRDYQLDGLNWLANSWCKGYSIILADEMGLGKTIQVISFLSYLCHTHSLFGPFIVVVPLS 186
Query: 331 TLSNWVLEFEKWAPTVSVVSYXGSPQSRRLVQAQMRSTKFNVLLTTYEYVIKDKGVLAKV 510
T++ W EF WA ++VV Y G SR +K L +
Sbjct: 187 TMAAWQREFVIWADQLNVVVYLGDITSR------------------------NKQFLGTI 222
Query: 511 QWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQNKLPELWALLNFLLPSIF 690
W +++DE HR+KN L + L + HRLL+TGTPLQN L ELWALL+FL+P F
Sbjct: 223 NWAGLVVDEAHRLKNDDSLLYKALE-EFHTNHRLLVTGTPLQNSLKELWALLHFLMPERF 281
Query: 691 XSWSTFEQ 714
SW FEQ
Sbjct: 282 SSWEAFEQ 289
>SB_56223| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1719
Score = 130 bits (314), Expect = 1e-30
Identities = 83/255 (32%), Positives = 131/255 (51%), Gaps = 11/255 (4%)
Frame = +1
Query: 16 KARDMIKKAKVEDDEYKTEEQTYYSIAHTVHESVTEQASILVNGNLKEYQIKGLEWLVSL 195
+ + ++KK + D+E EE+ + + + V Q + L +YQ G++WL L
Sbjct: 396 RIQSLLKKQGLNDNESSDEEE-FSDMEFDNNYKVPGQ----IWHKLYKYQQTGVKWLWEL 450
Query: 196 FNNNLNGILADEMGLGKTIQTIALVTYL----MEKKKVN-----GPYLIIVPLSTLSNWV 348
GI+ DEMGLGKTIQT+ + L + +K GP LI+ P++ L WV
Sbjct: 451 HCQQAGGIIGDEMGLGKTIQTVVFLAGLKYSGISARKSRRDQGLGPVLIVCPVTVLHQWV 510
Query: 349 LEFEKWAP--TVSVVSYXGSPQSRRLVQAQMRSTKFNVLLTTYEYVIKDKGVLAKVQWKY 522
EF KW P V+V+ GS RR + V++T+Y V ++ L +W Y
Sbjct: 511 KEFHKWWPEFRVAVLHDTGSFSGRRDALVRKICKAHGVIVTSYSGVRCNQDALLAQRWDY 570
Query: 523 MIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQNKLPELWALLNFLLPSIFXSWS 702
+I+DEGH+++N ++T PHR++L+G+P+QN L ELW+L +F+ P +
Sbjct: 571 VILDEGHKIRNPDAEITLACK-QIRTPHRIILSGSPMQNNLRELWSLFDFVFPGKLGTLP 629
Query: 703 TFEQWVNAXFATTGG 747
F + TTGG
Sbjct: 630 VFLTEFSVPI-TTGG 643
>SB_21827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 708
Score = 123 bits (296), Expect = 2e-28
Identities = 78/202 (38%), Positives = 115/202 (56%), Gaps = 5/202 (2%)
Frame = +1
Query: 100 TVHESVTEQASILVNGNLKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYL 279
T+ VT+ + + LK YQ+ GL WL+ + +NGILADEMGLGKT+Q I+ + +L
Sbjct: 474 TISGLVTQPDILNPSRQLKPYQLTGLNWLILMHEQGVNGILADEMGLGKTVQAISFIAHL 533
Query: 280 MEKKKVNGPYLIIVPLSTLSNWVLEFEKWAPTVSVVSYXGSPQSRRLVQAQM--RSTKFN 453
+EK +GP+LIIVP STLS S + R ++ ++ + F
Sbjct: 534 IEKGD-DGPHLIIVPSSTLS--------------------SQEERTYLREEILDEHSDFK 572
Query: 454 VLLTTYEYV---IKDKGVLAKVQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTG 624
V++TTY +D L +++ Y++ DEGH +KN + L T A RLLLTG
Sbjct: 573 VIITTYNMATGGFEDTSFLRQLRPHYVVFDEGHMLKNMQSQRYLKL-TRIRAKRRLLLTG 631
Query: 625 TPLQNKLPELWALLNFLLPSIF 690
TP+QN L EL +LL+F++P+IF
Sbjct: 632 TPMQNDLLELMSLLSFVMPTIF 653
>SB_35930| Best HMM Match : SNF2_N (HMM E-Value=1.3004e-42)
Length = 784
Score = 97.9 bits (233), Expect = 8e-21
Identities = 68/214 (31%), Positives = 106/214 (49%), Gaps = 23/214 (10%)
Frame = +1
Query: 139 VNGNLKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVN------ 300
+N L++YQ +G+++L + +N IL D+MGLGKT+Q IAL++ ++ K
Sbjct: 138 INCRLRDYQREGVQFLYQHYRSNNGAILGDDMGLGKTVQVIALLSAILGKTGTRADVFGK 197
Query: 301 -----------------GPYLIIVPLSTLSNWVLEFEKWAPTVSVVSYXGSPQSRRLVQA 429
G +LI+ P S L NW E + W V Y GS S+ +V
Sbjct: 198 YIGQGPSGKQSEVSTKKGVFLIVCPGSMLYNWKDELDTWG-YFRVKMYHGS--SKEMVMD 254
Query: 430 QMRSTKFNVLLTTYEYVIKDKGVLAKVQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPHR 609
Q K +V+LTTY+ + + V W +++DE H++K+ K T+ + R
Sbjct: 255 QAAKGKLDVVLTTYDTLRINVTEFDCVNWLAVVMDEVHKLKDPSAKNTKAAKRLKVQ-RR 313
Query: 610 LLLTGTPLQNKLPELWALLNFLLPSIFXSWSTFE 711
LTGTPLQN+ ELW +L++ P S F+
Sbjct: 314 FGLTGTPLQNRWSELWCVLDWANPGCLGSNLRFD 347
>SB_31213| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 919
Score = 85.8 bits (203), Expect = 3e-17
Identities = 38/119 (31%), Positives = 72/119 (60%)
Frame = +1
Query: 361 KWAPTVSVVSYXGSPQSRRLVQAQMRSTKFNVLLTTYEYVIKDKGVLAKVQWKYMIIDEG 540
K +++ +SY Q+ + F++L+T+Y+ V++D +++W+Y+++DE
Sbjct: 111 KTVQSIAFLSYLAEKQTHI---SDRNHAPFHLLITSYQLVVQDVRYFQRIKWQYIVLDEA 167
Query: 541 HRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQNKLPELWALLNFLLPSIFXSWSTFEQW 717
+K+ ++L Y +RLLLTGTP+QN + ELWALL+F++P++F + F +W
Sbjct: 168 QAIKSSSSVRWKIL-LGYQCRNRLLLTGTPIQNSMAELWALLHFIMPTLFDNHEEFNEW 225
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/28 (67%), Positives = 26/28 (92%)
Frame = +1
Query: 208 LNGILADEMGLGKTIQTIALVTYLMEKK 291
++GILADEMGLGKT+Q+IA ++YL EK+
Sbjct: 99 ISGILADEMGLGKTVQSIAFLSYLAEKQ 126
>SB_39230| Best HMM Match : SNF2_N (HMM E-Value=1.40004e-41)
Length = 1682
Score = 67.3 bits (157), Expect = 1e-11
Identities = 56/172 (32%), Positives = 79/172 (45%), Gaps = 21/172 (12%)
Frame = +1
Query: 217 ILADEMGLGKTIQTIALVTYLMEKKKVN-GPYLIIVPLSTLSNWVLEFEKWAPT-----V 378
ILA MGLGKT+Q + LV L K++ L++ PL+TL NW +EFEKW V
Sbjct: 823 ILAHCMGLGKTLQVVTLVHTLFNNKELEFTTALVVAPLNTLLNWQVEFEKWLSVDDRMEV 882
Query: 379 SVVSYXGSPQSRRLVQAQMRSTKFNVLLTTYEYV--------IKDKGV-------LAKVQ 513
V+ G RR +++ Y+ ++ K V L
Sbjct: 883 YVLQEVGHNSWRRADMLTQWQRYGGIMIMGYDMYRNLSLCNNVRSKKVKKIFKETLVDPG 942
Query: 514 WKYMIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQNKLPELWALLN 669
+I DEGH +KN +++ LN R++LTGTPLQN L E L +
Sbjct: 943 PDIVICDEGHILKNDASAISRALNA-IKTRRRVVLTGTPLQNNLIECVGLFS 993
>SB_3329| Best HMM Match : SNF2_N (HMM E-Value=1.5e-07)
Length = 200
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Frame = +1
Query: 445 KFNVLLTTYEYVIKD----KGVLAKVQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPHRL 612
K +++LTTY + D L K++W +++DEGH ++N + T+ + A R
Sbjct: 32 KQDIILTTYPTIGSDFRMNDSPLHKIKWLRIVLDEGHAIRNKNTVWTKAV-LKLEAERRW 90
Query: 613 LLTGTPLQNKLPELWALLNFL 675
++TGTP+QN++ +LW+++ FL
Sbjct: 91 VVTGTPIQNRIGDLWSIVRFL 111
>SB_44470| Best HMM Match : SNF2_N (HMM E-Value=1.2e-17)
Length = 549
Score = 54.8 bits (126), Expect = 7e-08
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Frame = +1
Query: 304 PYLIIVPLSTLSNWVLEFEKWA--PTVSVVSYXGSPQSRRLVQAQMRSTKFNVLLTTYEY 477
P L+I P + +WV E EK+ + + Y G P R+ ++ ++++ N+++ +Y+
Sbjct: 371 PSLVICPPTLTGHWVYEVEKFVIKEYLKPLHYTGPPMERQRLRNKVKN--HNLIVASYDI 428
Query: 478 VIKDKGVLAKVQWKYMIIDEGHRMKNHHCK 567
V D + W Y I+DEGH +KN K
Sbjct: 429 VRNDGDFFKSIHWNYCILDEGHIIKNGKTK 458
>SB_22405| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 764
Score = 54.0 bits (124), Expect = 1e-07
Identities = 32/101 (31%), Positives = 48/101 (47%)
Frame = +1
Query: 292 KVNGPYLIIVPLSTLSNWVLEFEKWAPTVSVVSYXGSPQSRRLVQAQMRSTKFNVLLTTY 471
KV LII P S + NW EF KW + + + R V+ + S + VL+ +Y
Sbjct: 292 KVCNRILIITPGSLVKNWCAEFRKWLGNERMRVFPVTSDMR--VKEFIISPIYPVLIISY 349
Query: 472 EYVIKDKGVLAKVQWKYMIIDEGHRMKNHHCKLTQVLNTHY 594
E I+ + + +++ I DE HR+KN K T V Y
Sbjct: 350 EMFIRSQDDIMNIKFDLFICDEAHRLKNSAIKTTTVAKAFY 390
>SB_24486| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 785
Score = 52.8 bits (121), Expect = 3e-07
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 12/119 (10%)
Frame = +1
Query: 52 DDEYKTEEQTYYSIAHTVHESVTEQASIL---VNGNLKEYQIKGLEWLV-----SLFNNN 207
+D Y ++ + +T H VTE+ L + +K +QI G+ +L +L N
Sbjct: 224 EDAYNVPDEQGRVLVNTNHP-VTEEDIFLAPQIASAVKPHQIGGIRFLYDNLIETLARCN 282
Query: 208 LNG----ILADEMGLGKTIQTIALVTYLMEKKKVNGPYLIIVPLSTLSNWVLEFEKWAP 372
++ ILA MGLGKT+Q +A V + L IVP++T+ NW+ EF W P
Sbjct: 283 ISAGFGCILAHCMGLGKTLQVVAFVDIFLRHTTAK-KVLCIVPINTIQNWLSEFNSWLP 340
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/79 (32%), Positives = 43/79 (54%)
Frame = +1
Query: 472 EYVIKDKGVLAKVQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQNKLPE 651
+++I + L K +I DEGHR+KN+ ++ L R++LTG PLQN L E
Sbjct: 445 DFLIGIQKALCKPGPDLVICDEGHRIKNNQANISHALKK-IKTRRRVVLTGYPLQNNLVE 503
Query: 652 LWALLNFLLPSIFXSWSTF 708
W +++F+ P+ + F
Sbjct: 504 YWCMVDFVRPNFLGNRHEF 522
>SB_16800| Best HMM Match : DUF1662 (HMM E-Value=0.095)
Length = 142
Score = 52.8 bits (121), Expect = 3e-07
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Frame = +1
Query: 520 YMIIDEGHRMKNHHCKLTQVLNTHYI-APHRLLLTGTPLQNKLPELWALLNFLLP-SIFX 693
Y+I+DEGH++KN K ++ N I A H +LTGTP+QN L E+WAL +F +
Sbjct: 2 YIILDEGHKIKNV-TKTSK--NVRAIPAKHHFILTGTPIQNNLREMWALFDFTCQGQLLG 58
Query: 694 SWSTFEQ 714
S TF+Q
Sbjct: 59 SSKTFKQ 65
>SB_54314| Best HMM Match : DEAD (HMM E-Value=0.48)
Length = 137
Score = 52.0 bits (119), Expect = 5e-07
Identities = 31/96 (32%), Positives = 47/96 (48%)
Frame = +1
Query: 292 KVNGPYLIIVPLSTLSNWVLEFEKWAPTVSVVSYXGSPQSRRLVQAQMRSTKFNVLLTTY 471
KV LII P S + NW EF KW + + + R V+ + S + VL+ +Y
Sbjct: 43 KVCNRILIITPGSLVKNWCAEFRKWLGNERMRVFPVTSDMR--VKEFIISPIYPVLIISY 100
Query: 472 EYVIKDKGVLAKVQWKYMIIDEGHRMKNHHCKLTQV 579
E I+ + + +++ I DE HR+KN K T V
Sbjct: 101 EMFIRSQDDIMNIKFDLFICDEAHRLKNSAIKTTTV 136
>SB_33711| Best HMM Match : PSCyt1 (HMM E-Value=9)
Length = 103
Score = 38.3 bits (85), Expect = 0.007
Identities = 23/80 (28%), Positives = 38/80 (47%)
Frame = +1
Query: 16 KARDMIKKAKVEDDEYKTEEQTYYSIAHTVHESVTEQASILVNGNLKEYQIKGLEWLVSL 195
K ++++ E DE + + ++ + T + L L+ YQ++G+ W+
Sbjct: 24 KLLELVRWNLGEMDEIRQKVDNLKAVKAEIVTQETLSGAGLRGITLRPYQLEGVGWMRDC 83
Query: 196 FNNNLNGILADEMGLGKTIQ 255
IL DEMGLGKTIQ
Sbjct: 84 ALTGHGCILGDEMGLGKTIQ 103
>SB_51562| Best HMM Match : HARP (HMM E-Value=0.00049)
Length = 508
Score = 35.5 bits (78), Expect = 0.046
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +1
Query: 217 ILADEMGLGKTIQTIALVTYLMEKKKVNGPYLIIVPLSTLSNW 345
I+AD+MGLGKT+Q I + ++ ++ P L++ P S W
Sbjct: 426 IIADDMGLGKTVQAICVASFYRKE----WPLLVVAPSSMRLTW 464
>SB_55297| Best HMM Match : Drf_FH1 (HMM E-Value=0.74)
Length = 808
Score = 32.3 bits (70), Expect = 0.43
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +1
Query: 214 GILADEMGLGKTIQTIALV 270
GILAD+MGLGKT+ I+L+
Sbjct: 706 GILADDMGLGKTLTVISLI 724
>SB_7965| Best HMM Match : Galactosyl_T (HMM E-Value=0.2)
Length = 345
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 496 VLAKVQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQ 636
VL+ + + + D HR KN+ K+T+VL +P+ L + G P++
Sbjct: 67 VLSSLNFSADMRDLHHRQKNNTSKMTKVLCWVLTSPNNLRVRGRPIK 113
>SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1938
Score = 29.1 bits (62), Expect = 4.0
Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 4/106 (3%)
Frame = +1
Query: 1 KTDEYKARDMIKKAKVEDDEYKTEEQTYYSIAHTVHESVTEQASILVNGNLKE----YQI 168
K D ++ + ++DE K E++ YY A S+ S++ G KE +
Sbjct: 1221 KPDNVNLTEIQAEELCKEDEEKKEKRNYYIAAEAEALSMNHTTSLVTVGFTKEGGRKIPV 1280
Query: 169 KGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGP 306
E L S ++++ I + L +A V + ++ N P
Sbjct: 1281 ASSENLASTTSSSVGAIAGGVVALLILAAFVAAVVLFIRRRNDNSP 1326
>SB_40227| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 28.3 bits (60), Expect = 7.0
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Frame = -1
Query: 318 DN*IRSIH---FLLFHEVGDQCNSLNGLTQAHLVGQNSIKIIVE**HQ-PFQALYLIFFE 151
DN + +IH LFH + NS G +Q L NS + +E P+ LY +F
Sbjct: 194 DNIMHAIHDDLLPLFHTMKQYSNS--GSSQIDL---NSRLVFMEGYELGPYSELYQLFSR 248
Query: 150 ISVH*NTSLFCYGLVNCVSNAVVGL 76
+ + +L + C NAVVGL
Sbjct: 249 LQLVIKDNLTVNNTLKCFQNAVVGL 273
>SB_30500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2014
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 306 RSIHFLLFHEVGDQCNSLN-GLTQAHLVGQNSIKI 205
R +H L+ E GD+C S N LT + +N++ I
Sbjct: 1110 RDVHRLIQKESGDRCKSANEALTVKRRIQENNVSI 1144
>SB_83| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 246 LTQAHLVGQNSIKIIVE**HQPFQALYLIFFEISVH 139
L + LVGQN+IK++ Q A+ + FF +V+
Sbjct: 35 LAKLRLVGQNTIKVLARHESQQSMAVAIAFFNTTVY 70
>SB_12769| Best HMM Match : Peptidase_A17 (HMM E-Value=0.00026)
Length = 352
Score = 27.9 bits (59), Expect = 9.3
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +2
Query: 335 FQTGY-WSSRSGLPQFRSFPTXALRSRVAWCKLRCDPPSSMCCSLPTSTSSRIREFSP 505
FQ Y WSSRS L + + P +RV + + P+S C T S RE P
Sbjct: 8 FQKKYLWSSRSNLEKTVTLPLPKTYTRVEIPAITREIPTSDTCRRWTHISRIAREMLP 65
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.133 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,739,874
Number of Sequences: 59808
Number of extensions: 521471
Number of successful extensions: 1518
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1488
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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