Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0468
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    27   0.82 
DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       26   1.4  
CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein ...    24   4.4  
AY752894-1|AAV30068.1|  156|Anopheles gambiae peroxidase 2 protein.    24   4.4  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   5.8  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    24   5.8  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   7.6  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   7.6  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 26.6 bits (56), Expect = 0.82
 Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = -1

Query: 126 LFCYGLVNCVSNAVVGLFLSFIFI-VLDFGLFN 31
           ++C+   +C+  + V LF++FIF+ +L F LF+
Sbjct: 35  IYCFVSPSCLECSSVPLFINFIFMFLLHFVLFS 67


>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 361 KWAPTVSVVSYXGSPQSRR 417
           KW PTV++  Y   P S R
Sbjct: 398 KWRPTVNIADYENRPTSTR 416


>CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein
           protein.
          Length = 196

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 455 CCSLPTSTSSRIREFSPRYNGST 523
           CC+LP +T+++ ++ S   N  T
Sbjct: 17  CCALPANTNAQTKQDSSNNNNRT 39


>AY752894-1|AAV30068.1|  156|Anopheles gambiae peroxidase 2 protein.
          Length = 156

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 595 IAPHRLLLTGTPLQNKLPELWALLNFLLPSIFXSW 699
           ++P RL L G P  N+ P   ALL+F +  +F  W
Sbjct: 27  LSPERLYLLGDPRTNQNP---ALLSFAI--LFLRW 56


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +1

Query: 616 LTGTPLQNKLPELWALLNFLLPSIFXSWSTFEQWV 720
           +TGTP Q     +  L+ FL  SI  +  T E W+
Sbjct: 309 VTGTPAQQDRFNVLLLILFLCVSILGTLITPELWM 343


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 361 SRTPIPSLKEYSTVR*LDKVHS 296
           +R P P + E  T R LD VH+
Sbjct: 58  ARKPFPPITERQTTRVLDLVHT 79


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = -1

Query: 465 SEQHIELGGSHLSLHQATRLRRAXVGNDRNCGSPL 361
           S   I+   SHL +  A RL      N  NC  P+
Sbjct: 559 SYSRIDTLRSHLRIKHADRLNAPKFSNPPNCKLPM 593


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = -1

Query: 465 SEQHIELGGSHLSLHQATRLRRAXVGNDRNCGSPL 361
           S   I+   SHL +  A RL      N  NC  P+
Sbjct: 535 SYSRIDTLRSHLRIKHADRLNAPKFSNPPNCKLPM 569


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.133    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 796,302
Number of Sequences: 2352
Number of extensions: 17175
Number of successful extensions: 51
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)