Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0465
         (750 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S65442-1|AAB28140.1|   69|Homo sapiens furin protein.                  33   0.83 
AF053356-3|AAC78792.1|  817|Homo sapiens ORF2 protein.                 33   0.83 
AB209610-1|BAD92847.1|  835|Homo sapiens PREDICTED: F-box protei...    32   2.5  
BC130531-1|AAI30532.1|  491|Homo sapiens Cas-Br-M (murine) ecotr...    31   5.8  
BC130529-1|AAI30530.1|  491|Homo sapiens Cas-Br-M (murine) ecotr...    31   5.8  
BC027460-1|AAH27460.2|  488|Homo sapiens CBLL1 protein protein.        31   5.8  
BC013764-1|AAH13764.1|  325|Homo sapiens potassium channel tetra...    31   5.8  
AK026762-1|BAB15544.1|  491|Homo sapiens protein ( Homo sapiens ...    31   5.8  
AJ347532-1|CAC78988.1|   82|Homo sapiens immunoglobulin kappa ch...    31   5.8  
AF359381-1|AAQ15187.1|  325|Homo sapiens C13orf2 protein.              31   5.8  
AC002467-2|AAS07390.1|  491|Homo sapiens unknown protein.              31   5.8  
BC125125-1|AAI25126.1|  956|Homo sapiens FBXO10 protein protein.       30   7.7  
AL513165-1|CAI16152.1|  954|Homo sapiens F-box protein 10 protein.     30   7.7  
AF176705-1|AAF03705.1|  551|Homo sapiens F-box protein FBX10 pro...    30   7.7  

>S65442-1|AAB28140.1|   69|Homo sapiens furin protein.
          Length = 69

 Score = 33.5 bits (73), Expect = 0.83
 Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
 Frame = +2

Query: 329 AVLFASKWAQSNAAPWSQRESFARGL--HALEWPQPRVS-RW*CSARRGSGVP*RHPADP 499
           A L A+ WA +N        S+  GL   A  WP PR+  +W  S    S       + P
Sbjct: 3   AHLNANDWA-TNGVGRKVSHSYGYGLWTQAPWWPWPRIGPQWPPSGSASS------TSSP 55

Query: 500 GPRTFGNSQRAGRP 541
            P+T GN  R GRP
Sbjct: 56  SPKTSGNGSRCGRP 69


>AF053356-3|AAC78792.1|  817|Homo sapiens ORF2 protein.
          Length = 817

 Score = 33.5 bits (73), Expect = 0.83
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = +3

Query: 348 NGPNP-TLRRGPRESLLLEDYMPWNGPNPEYRAGNAVRVEGPEYRDVTQQTLARGPSGTA 524
           + P+P  +++GP+E +  E  + + G   E      +  EGPE  D+    L+ G  G++
Sbjct: 229 SAPHPGPMQKGPKEPIPEEQELDFQGLEEEEEPSEGLEEEGPEADDIRGIQLSPG-VGSS 287

Query: 525 NGPAG 539
            GP G
Sbjct: 288 AGPPG 292


>AB209610-1|BAD92847.1|  835|Homo sapiens PREDICTED: F-box protein
           10 variant protein.
          Length = 835

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = -2

Query: 503 GQGLLGDVTVLRTLDAHCITSAI 435
           GQG LG+V +L ++D HC+T+ +
Sbjct: 36  GQGKLGEVALLASIDQHCLTTRL 58


>BC130531-1|AAI30532.1|  491|Homo sapiens Cas-Br-M (murine)
           ecotropic retroviral transforming sequence-like 1
           protein.
          Length = 491

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 210 RPHSNLVLCPVRIDAASALREPSP 139
           R HSNL+  P++ D+ S  REP P
Sbjct: 287 RKHSNLITVPIQDDSNSGAREPPP 310


>BC130529-1|AAI30530.1|  491|Homo sapiens Cas-Br-M (murine)
           ecotropic retroviral transforming sequence-like 1
           protein.
          Length = 491

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 210 RPHSNLVLCPVRIDAASALREPSP 139
           R HSNL+  P++ D+ S  REP P
Sbjct: 287 RKHSNLITVPIQDDSNSGAREPPP 310


>BC027460-1|AAH27460.2|  488|Homo sapiens CBLL1 protein protein.
          Length = 488

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 210 RPHSNLVLCPVRIDAASALREPSP 139
           R HSNL+  P++ D+ S  REP P
Sbjct: 284 RKHSNLITVPIQDDSNSGAREPPP 307


>BC013764-1|AAH13764.1|  325|Homo sapiens potassium channel
           tetramerisation domain containing 12 protein.
          Length = 325

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 19/61 (31%), Positives = 28/61 (45%)
 Frame = +3

Query: 351 GPNPTLRRGPRESLLLEDYMPWNGPNPEYRAGNAVRVEGPEYRDVTQQTLARGPSGTANG 530
           GP P+ R   +E  L ++ +P     PE + G +     P     T +  +R PSG A G
Sbjct: 138 GPPPSRRGVHKEGSLGDELLPLGYSEPEQQEGASAGAPSP-----TLELASRSPSGGAAG 192

Query: 531 P 533
           P
Sbjct: 193 P 193


>AK026762-1|BAB15544.1|  491|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23109 fis, clone LNG07754. ).
          Length = 491

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 210 RPHSNLVLCPVRIDAASALREPSP 139
           R HSNL+  P++ D+ S  REP P
Sbjct: 287 RKHSNLITVPIQDDSNSGAREPPP 310


>AJ347532-1|CAC78988.1|   82|Homo sapiens immunoglobulin kappa chain
           variable region protein.
          Length = 82

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = -3

Query: 469 GPSTR-TALPARYSGLGPFQGM*SSSKRLSLGPRRSVGLGPFACEQYGDLYLVS 311
           G STR T +PAR+SG G       +   L++G  +S     + C+QY D + ++
Sbjct: 33  GASTRATGIPARFSGSGS-----GTEFTLTIGSLQSEDFAVYYCQQYSDWHALT 81


>AF359381-1|AAQ15187.1|  325|Homo sapiens C13orf2 protein.
          Length = 325

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 19/61 (31%), Positives = 28/61 (45%)
 Frame = +3

Query: 351 GPNPTLRRGPRESLLLEDYMPWNGPNPEYRAGNAVRVEGPEYRDVTQQTLARGPSGTANG 530
           GP P+ R   +E  L ++ +P     PE + G +     P     T +  +R PSG A G
Sbjct: 138 GPPPSRRGVHKEGSLGDELLPLGYSEPEQQEGASAGAPSP-----TLELASRSPSGGAAG 192

Query: 531 P 533
           P
Sbjct: 193 P 193


>AC002467-2|AAS07390.1|  491|Homo sapiens unknown protein.
          Length = 491

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 210 RPHSNLVLCPVRIDAASALREPSP 139
           R HSNL+  P++ D+ S  REP P
Sbjct: 287 RKHSNLITVPIQDDSNSGAREPPP 310


>BC125125-1|AAI25126.1|  956|Homo sapiens FBXO10 protein protein.
          Length = 956

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 503 GQGLLGDVTVLRTLDAHCITSAI 435
           GQG LG+V +L ++D HC T+ +
Sbjct: 157 GQGKLGEVALLASIDQHCSTTRL 179


>AL513165-1|CAI16152.1|  954|Homo sapiens F-box protein 10 protein.
          Length = 954

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 503 GQGLLGDVTVLRTLDAHCITSAI 435
           GQG LG+V +L ++D HC T+ +
Sbjct: 157 GQGKLGEVALLASIDQHCSTTRL 179


>AF176705-1|AAF03705.1|  551|Homo sapiens F-box protein FBX10
           protein.
          Length = 551

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 503 GQGLLGDVTVLRTLDAHCITSAI 435
           GQG LG+V +L ++D HC T+ +
Sbjct: 173 GQGKLGEVALLASIDQHCSTTRL 195


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,921,544
Number of Sequences: 237096
Number of extensions: 2795088
Number of successful extensions: 10412
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 9691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10400
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)