Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0464
(750 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61151-1|AAB41306.1| 45|Tribolium castaneum TATH1 protein. 27 0.12
AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein. 27 0.12
AY321476-2|AAQ23387.1| 257|Tribolium castaneum Ase protein. 25 0.49
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 24 1.1
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 24 1.1
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 24 1.1
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 23 2.0
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 23 2.6
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 23 3.4
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 22 4.6
AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxida... 22 6.0
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 22 6.0
>U61151-1|AAB41306.1| 45|Tribolium castaneum TATH1 protein.
Length = 45
Score = 27.5 bits (58), Expect = 0.12
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 176 KLQDLVPFMPKNRKISKLEVIQHVIDY 256
+L+D+VP + +RK+SK E +Q Y
Sbjct: 19 RLRDVVPSLGNDRKLSKFETLQMAQTY 45
>AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein.
Length = 253
Score = 27.5 bits (58), Expect = 0.12
Identities = 9/27 (33%), Positives = 20/27 (74%)
Frame = +2
Query: 209 NRKISKLEVIQHVIDYICDLQSALENH 289
++K+SK+E ++ ++YI L+ +E+H
Sbjct: 132 SKKLSKVETLRLAVEYIRSLKQMIEDH 158
>AY321476-2|AAQ23387.1| 257|Tribolium castaneum Ase protein.
Length = 257
Score = 25.4 bits (53), Expect = 0.49
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +2
Query: 209 NRKISKLEVIQHVIDYICDLQSAL 280
N+K+SK+E ++ ++YI L+ L
Sbjct: 95 NKKLSKVETLRMAVEYIRSLEDLL 118
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 221 RSFYSWA*RVRDPGASRGTF 162
R Y W +V GAS GTF
Sbjct: 208 RQIYPWMRKVHVAGASNGTF 227
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 221 RSFYSWA*RVRDPGASRGTF 162
R Y W +V GAS GTF
Sbjct: 208 RQIYPWMRKVHVAGASNGTF 227
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 221 RSFYSWA*RVRDPGASRGTF 162
R Y W +V GAS GTF
Sbjct: 208 RQIYPWMRKVHVAGASNGTF 227
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 23.4 bits (48), Expect = 2.0
Identities = 8/28 (28%), Positives = 19/28 (67%)
Frame = +2
Query: 32 LPSVRVQ*LKMKAITAVCATGASVPAIA 115
+P +++Q + +++TA+ TG+ V I+
Sbjct: 87 VPEIKIQISQQQSVTALLDTGSEVSCIS 114
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 343 SVAAAPPSEETARPSP 390
+ + APP EE A P+P
Sbjct: 42 AASPAPPEEEAASPTP 57
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 22.6 bits (46), Expect = 3.4
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 1 LTRIALRLYIFTQCSCSVTQDESDNSSV 84
+TR LR + T S SVT+D+ +SSV
Sbjct: 31 VTRRRLRRPLKTTQSVSVTKDQDVSSSV 58
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 22.2 bits (45), Expect = 4.6
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 396 PTPSSANHPPHTNTEIKRHQKNKTNLTG 479
PTPS++ PP N + + Q TG
Sbjct: 225 PTPSTSASPPTVNIKKESPQMQSYRPTG 252
>AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxidase
subunit 2 protein.
Length = 683
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 613 EDHLSMISYVRSRYDQYMYFY 675
+D LS+ Y R R + Y++ Y
Sbjct: 105 DDLLSVAVYARDRVNPYLFSY 125
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3
Query: 402 PSSANHPPHTNTEIKRHQKNKTNLTGR 482
P + + PP N+ + HQ T+L G+
Sbjct: 121 PGATSQPPTDNSHVHHHQ---TSLLGK 144
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,029
Number of Sequences: 336
Number of extensions: 3184
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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