Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0463
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF045639-8|AAC02566.1| 649|Caenorhabditis elegans Hypothetical ... 43 2e-04
U28737-6|AAL02486.1| 566|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U64845-5|AAC48027.1| 581|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z69717-3|CAA93534.1| 617|Caenorhabditis elegans Hypothetical pr... 38 0.005
U64845-6|AAC48028.1| 556|Caenorhabditis elegans Hypothetical pr... 38 0.005
U64845-4|AAC48029.1| 623|Caenorhabditis elegans Hypothetical pr... 38 0.005
AL009170-1|CAA15637.1| 617|Caenorhabditis elegans Hypothetical ... 38 0.005
AF016414-5|AAG24020.1| 585|Caenorhabditis elegans Hypothetical ... 38 0.009
U64845-12|AAC48025.1| 475|Caenorhabditis elegans Hypothetical p... 36 0.028
M98552-7|AAK82925.2| 355|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for... 27 9.8
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 27 9.8
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 27 9.8
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei... 27 9.8
>AF045639-8|AAC02566.1| 649|Caenorhabditis elegans Hypothetical
protein B0212.1 protein.
Length = 649
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +2
Query: 23 AWSLVQRFTLPLCIFHRFHSAVTLAEIWKTSYKAR 127
+W + R PL IF+RFHS+V AEIWK Y A+
Sbjct: 598 SWVFLVRSFSPLTIFYRFHSSVCFAEIWKNVYAAK 632
>U28737-6|AAL02486.1| 566|Caenorhabditis elegans Hypothetical
protein F14B8.7 protein.
Length = 566
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +2
Query: 26 WSLVQRFTLPLCIFHRFHSAVTLAEIWKTSYK 121
W++V R PL IF+RFHS+ AEIWK +++
Sbjct: 520 WAIVVRGCSPLTIFYRFHSSACFAEIWKKTFR 551
>U64845-5|AAC48027.1| 581|Caenorhabditis elegans Hypothetical
protein F45F2.6 protein.
Length = 581
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 26 WSLVQRFTLPLCIFHRFHSAVTLAEIWKTSYKAR 127
+S + + PL +F+RFHS+ LAEIWK +Y +
Sbjct: 531 YSALLNISSPLVVFYRFHSSACLAEIWKHAYSKK 564
>Z69717-3|CAA93534.1| 617|Caenorhabditis elegans Hypothetical
protein H19J13.1 protein.
Length = 617
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2
Query: 53 PLCIFHRFHSAVTLAEIWKTSYKAR 127
PL +F+RFHS+ LAEIWK +Y +
Sbjct: 557 PLLVFYRFHSSACLAEIWKHTYSTK 581
>U64845-6|AAC48028.1| 556|Caenorhabditis elegans Hypothetical
protein F45F2.5 protein.
Length = 556
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2
Query: 23 AWSLVQRFTLPLCIFHRFHSAVTLAEIWKTSYKAR 127
++S + P+ +F+RFHS+ LAEIWK +Y +
Sbjct: 503 SYSAMLNIASPIVVFYRFHSSACLAEIWKHTYSRK 537
>U64845-4|AAC48029.1| 623|Caenorhabditis elegans Hypothetical
protein F45F2.7 protein.
Length = 623
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2
Query: 53 PLCIFHRFHSAVTLAEIWKTSYKAR 127
PL +F+RFHS+ LAEIWK +Y +
Sbjct: 578 PLVVFYRFHSSACLAEIWKHAYSTK 602
>AL009170-1|CAA15637.1| 617|Caenorhabditis elegans Hypothetical
protein H19J13.1 protein.
Length = 617
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2
Query: 53 PLCIFHRFHSAVTLAEIWKTSYKAR 127
PL +F+RFHS+ LAEIWK +Y +
Sbjct: 557 PLLVFYRFHSSACLAEIWKHTYSTK 581
>AF016414-5|AAG24020.1| 585|Caenorhabditis elegans Hypothetical
protein D1065.1 protein.
Length = 585
Score = 37.5 bits (83), Expect = 0.009
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 53 PLCIFHRFHSAVTLAEIWKTSY 118
P+ +F+RFHS+ LAEIWK +Y
Sbjct: 540 PIVVFYRFHSSACLAEIWKNTY 561
>U64845-12|AAC48025.1| 475|Caenorhabditis elegans Hypothetical
protein F45F2.1 protein.
Length = 475
Score = 35.9 bits (79), Expect = 0.028
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2
Query: 41 RFTLPLCIFHRFHSAVTLAEIWKTSY 118
+ LPL +F RFH +V AEIWK Y
Sbjct: 389 KICLPLVVFFRFHCSVCFAEIWKVYY 414
>M98552-7|AAK82925.2| 355|Caenorhabditis elegans Hypothetical
protein ZK370.7 protein.
Length = 355
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -1
Query: 277 QTSRNIIS*KTDVPQ*DVTGSIIALFYSKTFQNAWNRTFYIPSVQ--GCSLKTSFVACLP 104
+T+ N I + V VT +++ K ++ + F+I ++Q C + ++ +ACL
Sbjct: 205 ETAENYIVGLSAVLATCVTAGFAGVYFEKMLKDGGSTPFWIRNMQMYSCGVISASIACLT 264
Query: 103 DFS 95
DFS
Sbjct: 265 DFS 267
>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
protein.
Length = 4280
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 111 VFQISARVTAEWKRWK 64
VFQ+ A+V EW WK
Sbjct: 3739 VFQVRAKVDGEWNHWK 3754
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 111 VFQISARVTAEWKRWK 64
VFQ+ A+V EW WK
Sbjct: 3739 VFQVRAKVDGEWNHWK 3754
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 111 VFQISARVTAEWKRWK 64
VFQ+ A+V EW WK
Sbjct: 3739 VFQVRAKVDGEWNHWK 3754
>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
805, isoform a protein.
Length = 4280
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 111 VFQISARVTAEWKRWK 64
VFQ+ A+V EW WK
Sbjct: 3739 VFQVRAKVDGEWNHWK 3754
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,469,040
Number of Sequences: 27780
Number of extensions: 307117
Number of successful extensions: 601
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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