Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0462
         (700 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC056882-1|AAH56882.1|  386|Homo sapiens CUEDC1 protein protein.       76   1e-13
AK000746-1|BAA91357.1|  386|Homo sapiens protein ( Homo sapiens ...    76   1e-13
AK000977-1|BAA91452.1|  358|Homo sapiens protein ( Homo sapiens ...    74   6e-13
CR533477-1|CAG38508.1|  274|Homo sapiens TOLLIP protein.               38   0.034
BC018272-1|AAH18272.1|  274|Homo sapiens toll interacting protei...    38   0.034
BC012057-1|AAH12057.1|  274|Homo sapiens toll interacting protei...    38   0.034
BC004420-1|AAH04420.1|  274|Homo sapiens toll interacting protei...    38   0.034
AY730683-1|AAX22229.1|  274|Homo sapiens toll interacting protei...    38   0.034
AK096693-1|BAC04844.1|  213|Homo sapiens protein ( Homo sapiens ...    38   0.034
AK022871-1|BAB14283.1|  205|Homo sapiens protein ( Homo sapiens ...    38   0.034
AJ242972-1|CAB58118.1|  273|Homo sapiens TOLLIP protein protein.       38   0.034
AB209541-1|BAD92778.1|  352|Homo sapiens toll interacting protei...    33   1.3  

>BC056882-1|AAH56882.1|  386|Homo sapiens CUEDC1 protein protein.
          Length = 386

 Score = 76.2 bits (179), Expect = 1e-13
 Identities = 35/47 (74%), Positives = 41/47 (87%)
 Frame = +2

Query: 278 QLEFTQAMNDFKTMFPDMDDDVIEAVLRANQGAVDATIDQLLXMSTD 418
           +LEF QAM+DFKTMFP+MD D+IE VLRAN GAVDATIDQLL M+ +
Sbjct: 44  RLEFNQAMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLLQMNLE 90


>AK000746-1|BAA91357.1|  386|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20739 fis, clone HEP07341. ).
          Length = 386

 Score = 76.2 bits (179), Expect = 1e-13
 Identities = 35/47 (74%), Positives = 41/47 (87%)
 Frame = +2

Query: 278 QLEFTQAMNDFKTMFPDMDDDVIEAVLRANQGAVDATIDQLLXMSTD 418
           +LEF QAM+DFKTMFP+MD D+IE VLRAN GAVDATIDQLL M+ +
Sbjct: 44  RLEFNQAMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLLQMNLE 90


>AK000977-1|BAA91452.1|  358|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10115 fis, clone HEMBA1002777. ).
          Length = 358

 Score = 73.7 bits (173), Expect = 6e-13
 Identities = 34/47 (72%), Positives = 40/47 (85%)
 Frame = +2

Query: 278 QLEFTQAMNDFKTMFPDMDDDVIEAVLRANQGAVDATIDQLLXMSTD 418
           +LE  QAM+DFKTMFP+MD D+IE VLRAN GAVDATIDQLL M+ +
Sbjct: 44  RLELNQAMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLLQMNLE 90


>CR533477-1|CAG38508.1|  274|Homo sapiens TOLLIP protein.
          Length = 274

 Score = 37.9 bits (84), Expect = 0.034
 Identities = 17/34 (50%), Positives = 23/34 (67%)
 Frame = +2

Query: 317 MFPDMDDDVIEAVLRANQGAVDATIDQLLXMSTD 418
           MFP+MD +VI +VL A +G  DA I+ LL M  +
Sbjct: 240 MFPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEE 273


>BC018272-1|AAH18272.1|  274|Homo sapiens toll interacting protein
           protein.
          Length = 274

 Score = 37.9 bits (84), Expect = 0.034
 Identities = 17/34 (50%), Positives = 23/34 (67%)
 Frame = +2

Query: 317 MFPDMDDDVIEAVLRANQGAVDATIDQLLXMSTD 418
           MFP+MD +VI +VL A +G  DA I+ LL M  +
Sbjct: 240 MFPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEE 273


>BC012057-1|AAH12057.1|  274|Homo sapiens toll interacting protein
           protein.
          Length = 274

 Score = 37.9 bits (84), Expect = 0.034
 Identities = 17/34 (50%), Positives = 23/34 (67%)
 Frame = +2

Query: 317 MFPDMDDDVIEAVLRANQGAVDATIDQLLXMSTD 418
           MFP+MD +VI +VL A +G  DA I+ LL M  +
Sbjct: 240 MFPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEE 273


>BC004420-1|AAH04420.1|  274|Homo sapiens toll interacting protein
           protein.
          Length = 274

 Score = 37.9 bits (84), Expect = 0.034
 Identities = 17/34 (50%), Positives = 23/34 (67%)
 Frame = +2

Query: 317 MFPDMDDDVIEAVLRANQGAVDATIDQLLXMSTD 418
           MFP+MD +VI +VL A +G  DA I+ LL M  +
Sbjct: 240 MFPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEE 273


>AY730683-1|AAX22229.1|  274|Homo sapiens toll interacting protein
           protein.
          Length = 274

 Score = 37.9 bits (84), Expect = 0.034
 Identities = 17/34 (50%), Positives = 23/34 (67%)
 Frame = +2

Query: 317 MFPDMDDDVIEAVLRANQGAVDATIDQLLXMSTD 418
           MFP+MD +VI +VL A +G  DA I+ LL M  +
Sbjct: 240 MFPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEE 273


>AK096693-1|BAC04844.1|  213|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39374 fis, clone PEBLM2008576, highly similar to
           Homo sapiens mRNA for TOLLIP protein. ).
          Length = 213

 Score = 37.9 bits (84), Expect = 0.034
 Identities = 17/34 (50%), Positives = 23/34 (67%)
 Frame = +2

Query: 317 MFPDMDDDVIEAVLRANQGAVDATIDQLLXMSTD 418
           MFP+MD +VI +VL A +G  DA I+ LL M  +
Sbjct: 179 MFPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEE 212


>AK022871-1|BAB14283.1|  205|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12809 fis, clone NT2RP2002408, highly similar to
           Homo sapiens mRNA for TOLLIP protein. ).
          Length = 205

 Score = 37.9 bits (84), Expect = 0.034
 Identities = 17/34 (50%), Positives = 23/34 (67%)
 Frame = +2

Query: 317 MFPDMDDDVIEAVLRANQGAVDATIDQLLXMSTD 418
           MFP+MD +VI +VL A +G  DA I+ LL M  +
Sbjct: 171 MFPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEE 204


>AJ242972-1|CAB58118.1|  273|Homo sapiens TOLLIP protein protein.
          Length = 273

 Score = 37.9 bits (84), Expect = 0.034
 Identities = 17/34 (50%), Positives = 23/34 (67%)
 Frame = +2

Query: 317 MFPDMDDDVIEAVLRANQGAVDATIDQLLXMSTD 418
           MFP+MD +VI +VL A +G  DA I+ LL M  +
Sbjct: 239 MFPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEE 272


>AB209541-1|BAD92778.1|  352|Homo sapiens toll interacting protein
           variant protein.
          Length = 352

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +2

Query: 317 MFPDMDDDVIEAVLRANQGAVDATIDQLLXM 409
           MFP+MD +VI +VL A +G  DA I   L +
Sbjct: 271 MFPNMDQEVIRSVLEAQRGNKDAAIPSHLVL 301


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,316,243
Number of Sequences: 237096
Number of extensions: 1844640
Number of successful extensions: 4549
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4549
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)