Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0462
(700 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070503-1|AAL47974.1| 292|Drosophila melanogaster GH08896p pro... 92 6e-19
AE014296-373|AAF47582.2| 292|Drosophila melanogaster CG12024-PA... 92 6e-19
AE014296-374|AAN11501.1| 276|Drosophila melanogaster CG12024-PB... 91 1e-18
AE014298-1847|AAF48227.2| 320|Drosophila melanogaster CG12714-P... 33 0.49
AE014297-2908|AAF55834.2| 4496|Drosophila melanogaster CG3723-PA... 31 2.0
AJ309005-1|CAC35209.1| 2382|Drosophila melanogaster GRAAL2 prote... 29 8.0
AE014296-1582|AAF50322.2| 563|Drosophila melanogaster CG4821-PC... 29 8.0
AE014296-1580|AAF50319.3| 2786|Drosophila melanogaster CG4821-PA... 29 8.0
>AY070503-1|AAL47974.1| 292|Drosophila melanogaster GH08896p
protein.
Length = 292
Score = 92.3 bits (219), Expect = 6e-19
Identities = 44/61 (72%), Positives = 51/61 (83%)
Frame = +2
Query: 269 STMQLEFTQAMNDFKTMFPDMDDDVIEAVLRANQGAVDATIDQLLXMSTDNQNELLRLEM 448
ST+QLEF+QAM DFK MFPD+D +VIEA+LRAN GAVD TID LL MS DNQNE LR E+
Sbjct: 2 STLQLEFSQAMTDFKKMFPDIDREVIEAILRANLGAVDQTIDALLAMSIDNQNEKLRNEL 61
Query: 449 E 451
+
Sbjct: 62 D 62
Score = 35.1 bits (77), Expect = 0.092
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 560 SVPLAVRKRWIPRMLGPLPPMFLRIPPATDARIDLXLEMDDDRIA 694
+ P +RW P +LGPLP FLRI PA + E+ D++ A
Sbjct: 138 NTPTKRSRRWNPPILGPLPAGFLRITPAPGQQ---DFELPDEQFA 179
>AE014296-373|AAF47582.2| 292|Drosophila melanogaster CG12024-PA,
isoform A protein.
Length = 292
Score = 92.3 bits (219), Expect = 6e-19
Identities = 44/61 (72%), Positives = 51/61 (83%)
Frame = +2
Query: 269 STMQLEFTQAMNDFKTMFPDMDDDVIEAVLRANQGAVDATIDQLLXMSTDNQNELLRLEM 448
ST+QLEF+QAM DFK MFPD+D +VIEA+LRAN GAVD TID LL MS DNQNE LR E+
Sbjct: 2 STLQLEFSQAMTDFKKMFPDIDREVIEAILRANLGAVDQTIDALLAMSIDNQNEKLRNEL 61
Query: 449 E 451
+
Sbjct: 62 D 62
Score = 35.1 bits (77), Expect = 0.092
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 560 SVPLAVRKRWIPRMLGPLPPMFLRIPPATDARIDLXLEMDDDRIA 694
+ P +RW P +LGPLP FLRI PA + E+ D++ A
Sbjct: 138 NTPTKRSRRWNPPILGPLPAGFLRITPAPGQQ---DFELPDEQFA 179
>AE014296-374|AAN11501.1| 276|Drosophila melanogaster CG12024-PB,
isoform B protein.
Length = 276
Score = 91.5 bits (217), Expect = 1e-18
Identities = 64/166 (38%), Positives = 86/166 (51%), Gaps = 24/166 (14%)
Frame = +2
Query: 269 STMQLEFTQAMNDFKTMFPDMDDDVIEAVLRANQGAVDATIDQLLXMSTDNQNELLRL-- 442
ST+QLEF+QAM DFK MFPD+D +VIEA+LRAN GAVD TID LL MS DNQ+ L+ L
Sbjct: 2 STLQLEFSQAMTDFKKMFPDIDREVIEAILRANLGAVDQTIDALLAMSIDNQS-LINLND 60
Query: 443 ---EMERVESN-------------------TPSKRKDRRNTRPAXXXXXXXTAALVNVXD 556
+++ V++ T + +NT + A
Sbjct: 61 SDRDLQLVDTTDGGGAGAVGAPGAPSALLPTAGASPNHQNTGASPKQRPLGAANSKGSSQ 120
Query: 557 ESVPLAVRKRWIPRMLGPLPPMFLRIPPATDARIDLXLEMDDDRIA 694
+ P +RW P +LGPLP FLRI PA + E+ D++ A
Sbjct: 121 NNTPTKRSRRWNPPILGPLPAGFLRITPAPGQQ---DFELPDEQFA 163
>AE014298-1847|AAF48227.2| 320|Drosophila melanogaster CG12714-PB
protein.
Length = 320
Score = 32.7 bits (71), Expect = 0.49
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -2
Query: 288 NSSCIVDAIAPPTSGTRSVRDVTSASPLPVAQLIYDAGLPQCLRGSTPC-RHWPSSRHTT 112
N + +A A TSG R D +P PV+ L LP+ S RHWPS H
Sbjct: 146 NERRVREAKATATSGRRCANDKLGKTPTPVS-LALSHALPRAHAHSHAYPRHWPSRSHAL 204
Query: 111 R 109
+
Sbjct: 205 K 205
>AE014297-2908|AAF55834.2| 4496|Drosophila melanogaster CG3723-PA
protein.
Length = 4496
Score = 30.7 bits (66), Expect = 2.0
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 275 MQLEFTQAMNDFKTMFPDMDDDVIEAVLRANQGAV-DATIDQLLXMSTDNQNELLRLEME 451
++ + T+ NDFK M ++DD++ + A + + D + + L + +E +E +
Sbjct: 3610 LKADLTKQQNDFKIMLKKLEDDLLSRLSSAGENILGDTALVENLETTKSTASE---IEQK 3666
Query: 452 RVESNTPSKR--KDRRNTRPA 508
E+ SK K R RPA
Sbjct: 3667 VAEAKITSKEIDKAREYYRPA 3687
>AJ309005-1|CAC35209.1| 2382|Drosophila melanogaster GRAAL2 protein
protein.
Length = 2382
Score = 28.7 bits (61), Expect = 8.0
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -2
Query: 279 CIVDAIAPPTSGTRSVRDVTSASPLPVAQLIYDAGLPQCLRGSTPCRH 136
C+ +A SGT +VRD TS + P A D G P RG P H
Sbjct: 181 CVHKDLAKCGSGTGAVRDDTSGTGYP-ALPFDDLGCPPGTRGLRPHPH 227
>AE014296-1582|AAF50322.2| 563|Drosophila melanogaster CG4821-PC,
isoform C protein.
Length = 563
Score = 28.7 bits (61), Expect = 8.0
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -2
Query: 279 CIVDAIAPPTSGTRSVRDVTSASPLPVAQLIYDAGLPQCLRGSTPCRH 136
C+ +A SGT +VRD TS + P A D G P RG P H
Sbjct: 181 CVHKDLAKCGSGTGAVRDDTSGTGYP-ALPFDDLGCPPGTRGLRPHPH 227
>AE014296-1580|AAF50319.3| 2786|Drosophila melanogaster CG4821-PA,
isoform A protein.
Length = 2786
Score = 28.7 bits (61), Expect = 8.0
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -2
Query: 279 CIVDAIAPPTSGTRSVRDVTSASPLPVAQLIYDAGLPQCLRGSTPCRH 136
C+ +A SGT +VRD TS + P A D G P RG P H
Sbjct: 181 CVHKDLAKCGSGTGAVRDDTSGTGYP-ALPFDDLGCPPGTRGLRPHPH 227
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,197,464
Number of Sequences: 53049
Number of extensions: 601773
Number of successful extensions: 1621
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1621
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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