Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0460
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010295-1|AAQ23613.1|  661|Drosophila melanogaster LD16058p pro...    29   6.1  
AF416603-1|AAL11905.1|  661|Drosophila melanogaster ribbon protein.    29   6.1  
AE013599-2846|AAF57588.1|  661|Drosophila melanogaster CG7230-PA...    29   6.1  

>BT010295-1|AAQ23613.1|  661|Drosophila melanogaster LD16058p
           protein.
          Length = 661

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = -3

Query: 365 RRRDEQSRQSKCNDRNHLQRHVTSRTRARDQQ---GLGPDPAQAG 240
           R RD+  R+   ++ +H Q HV   + AR ++      P P +AG
Sbjct: 571 RERDQDEREDADDEEDHEQEHVEDLSLARKERPPSPYSPQPTEAG 615


>AF416603-1|AAL11905.1|  661|Drosophila melanogaster ribbon protein.
          Length = 661

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = -3

Query: 365 RRRDEQSRQSKCNDRNHLQRHVTSRTRARDQQ---GLGPDPAQAG 240
           R RD+  R+   ++ +H Q HV   + AR ++      P P +AG
Sbjct: 571 RERDQDEREDADDEEDHEQEHVEDLSLARKERPPSPYSPQPTEAG 615


>AE013599-2846|AAF57588.1|  661|Drosophila melanogaster CG7230-PA
           protein.
          Length = 661

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = -3

Query: 365 RRRDEQSRQSKCNDRNHLQRHVTSRTRARDQQ---GLGPDPAQAG 240
           R RD+  R+   ++ +H Q HV   + AR ++      P P +AG
Sbjct: 571 RERDQDEREDADDEEDHEQEHVEDLSLARKERPPSPYSPQPTEAG 615


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,817,680
Number of Sequences: 53049
Number of extensions: 623891
Number of successful extensions: 1372
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1372
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)