Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0457
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.59 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   3.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.3  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 578  AVGGARESRGQKISRTISNINVCSHSAKH 664
            A+GG  +S+G K SR ++N    +   KH
Sbjct: 1474 ALGGWNDSQGDKYSRLVNNPAARARFIKH 1502


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +2

Query: 611 KISRTISNINVCSHSAKHRATWRRIARTSV 700
           K+   IS ++   +  KH   W+   RT +
Sbjct: 103 KLIEVISKLHKLDNKLKHMLIWKSYKRTQI 132


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 611 FALDFPLHHQPLNGVLIMS 555
           F +D P+H  P +G+L  S
Sbjct: 191 FPVDAPMHSPPGDGILDFS 209


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,489
Number of Sequences: 336
Number of extensions: 3761
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)