Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0453
         (800 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q75C93 Cluster: ACR023Wp; n=1; Eremothecium gossypii|Re...    35   2.7  
UniRef50_A1KCP4 Cluster: Conserved hypothetical secreted protein...    33   8.4  

>UniRef50_Q75C93 Cluster: ACR023Wp; n=1; Eremothecium gossypii|Rep:
           ACR023Wp - Ashbya gossypii (Yeast) (Eremothecium
           gossypii)
          Length = 769

 Score = 34.7 bits (76), Expect = 2.7
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +1

Query: 19  PSDPKPTSPARGAPCRPTNEALARRGRH 102
           P DP+PTSPA+ A  RP++ +L   G H
Sbjct: 552 PGDPQPTSPAQNATRRPSDASLGYPGSH 579


>UniRef50_A1KCP4 Cluster: Conserved hypothetical secreted protein;
           n=2; Azoarcus|Rep: Conserved hypothetical secreted
           protein - Azoarcus sp. (strain BH72)
          Length = 234

 Score = 33.1 bits (72), Expect = 8.4
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
 Frame = -2

Query: 664 FTTEVFLKYCEWYRVFDVSSIKSYTFNLN---LTYSYELSNESXHQN 533
           F TEV ++   WY + DV   +S  + L+   +T SY LS  S HQN
Sbjct: 111 FVTEVIVERPRWYWLNDVVVNRSLNYRLSYQAITRSYRLSIGSLHQN 157


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,250,342
Number of Sequences: 1657284
Number of extensions: 11695960
Number of successful extensions: 26615
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26583
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68731504465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)