Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0451
         (750 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B5843 Cluster: PREDICTED: hypothetical protein;...    33   5.7  
UniRef50_Q8XP96 Cluster: Glycogen biosynthesis protein; n=4; Clo...    33   7.5  
UniRef50_A5K3R5 Cluster: Putative uncharacterized protein; n=3; ...    33   9.9  

>UniRef50_UPI00015B5843 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 985

 Score = 33.5 bits (73), Expect = 5.7
 Identities = 18/56 (32%), Positives = 29/56 (51%)
 Frame = +1

Query: 340 CNLNLSERLIFYSK*DAVTEIFITLLNMLFINFH**FTSSFLRNNWKSYVQYENDC 507
           C+ N  +RL        +  +F+TL  +  +N H  + SSF RNN K    ++N+C
Sbjct: 387 CDFNDCKRLKKNENAIFLAALFLTLSKIAHVNKHEMWNSSFCRNNLKRLECWKNEC 442


>UniRef50_Q8XP96 Cluster: Glycogen biosynthesis protein; n=4;
           Clostridium|Rep: Glycogen biosynthesis protein -
           Clostridium perfringens
          Length = 368

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +1

Query: 280 LEYY*RSRPFY*TISPWYRVCNLNLSERLIFYSK*D 387
           LE+  +SR  Y  +SP Y +CN++L E L ++ K D
Sbjct: 105 LEFLTKSRREYVIMSPSYMICNIDLKEALEYHKKND 140


>UniRef50_A5K3R5 Cluster: Putative uncharacterized protein; n=3;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 1372

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = +1

Query: 460  FLRNNWKSYVQYENDCKINKNRNAKKTVDKEAQIFXHNTNXGGPNMTIIIYRCW 621
            +LR+N   + Q+ ND K +KN   K+   K+ ++     N  GP+ T +I   W
Sbjct: 1263 YLRDNASEWDQWNNDSKKSKNNLVKEVFGKQLRLI----NMCGPDATELILSLW 1312


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,046,693
Number of Sequences: 1657284
Number of extensions: 9294404
Number of successful extensions: 19064
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18974
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)