Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0451
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    24   1.5  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   2.0  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   4.6  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   4.6  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   6.0  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 274 TKLEYY*RSRPFY*TISPWYRVCNLNLSERLIFYS 378
           T L Y   +R +Y     W  VC LNLS   IF++
Sbjct: 44  TNLTYNNTNRKYY-----WLNVCCLNLSIVTIFFN 73


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 499 NDCKINKNRNAKKTVDK 549
           NDCK+N   N    VDK
Sbjct: 70  NDCKVNPCENGGTCVDK 86


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -1

Query: 585 AXICIMXKYLCLFIYCFFRVSVFIY 511
           A    M ++LCL  Y +F    +IY
Sbjct: 71  AHFSFMSRFLCLPFYSYFFYLSYIY 95


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -1

Query: 585 AXICIMXKYLCLFIYCFFRVSVFIY 511
           A    M ++LCL  Y +F    +IY
Sbjct: 27  AHFSFMSRFLCLPFYSYFFYLSYIY 51


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -2

Query: 563 NICASLSTVFFAFLFLFILQSFS 495
           N+C   ++++    FLF+L +FS
Sbjct: 223 NLCQVANSIYGFQNFLFVLSTFS 245


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,516
Number of Sequences: 336
Number of extensions: 2779
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)