Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0450
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    99   1e-22
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     34   0.004
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    26   1.4  
AJ973470-1|CAJ01517.1|  117|Anopheles gambiae hypothetical prote...    24   5.8  
AJ697733-1|CAG26926.1|  117|Anopheles gambiae putative chemosens...    24   5.8  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   7.6  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    23   7.6  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 99.1 bits (236), Expect = 1e-22
 Identities = 51/104 (49%), Positives = 70/104 (67%), Gaps = 7/104 (6%)
 Frame = +3

Query: 354  KSYLCIFVCLAVKAVHIELVTALSSEAYIAALKRFVSRRGKPRSIWSDNGTNFVGACNEL 533
            K Y+ IFVC   KAVHIELV+ L+S A++AAL+RFV+RRG    + SDNGTNF GA N+L
Sbjct: 1446 KGYISIFVCFVTKAVHIELVSNLTSSAFLAALRRFVARRGHVTELHSDNGTNFRGANNKL 1505

Query: 534  KGV--LSNSD-----IASFMSQEGIDFNFSPPYSPHFNGLAEXA 644
            + +  L NSD     +  + ++  + + F+PP +PHF GL E A
Sbjct: 1506 RELYKLLNSDTHQDEVVGWCAERDMKWKFTPPAAPHFGGLWEAA 1549



 Score = 61.3 bits (142), Expect = 3e-11
 Identities = 30/98 (30%), Positives = 46/98 (46%)
 Frame = +2

Query: 26   KHPIVHCSKHALTKXXXXXXXXXXXXXXXXXXXXXIRQSYWPLXGRNLSKTVVRNCLKCF 205
            KHP++   KH + +                     ++  +W +  RN++K  V NC+KC 
Sbjct: 1338 KHPVIIPGKHRIAELIADKYHKILRHAGAQLMINTMQLRFWIVGARNVAKRTVFNCVKCT 1397

Query: 206  RYRAQNVQPIMGQLPKTRTDLQFPFLNCSVDYAGPILI 319
            R R + +Q  M  LP+ R     PF    VDYAGPI++
Sbjct: 1398 RCRPKLIQQPMADLPEQRVRQARPFSISGVDYAGPIMV 1435


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 34.3 bits (75), Expect = 0.004
 Identities = 22/55 (40%), Positives = 26/55 (47%)
 Frame = +3

Query: 474 KPRSIWSDNGTNFVGACNELKGVLSNSDIASFMSQEGIDFNFSPPYSPHFNGLAE 638
           KPR I SD G           G  SN  +  F + EGI   F+  YSP  NG+AE
Sbjct: 401 KPRIIRSDQG-----------GEYSNKALRKFCADEGIKMEFTAAYSPQQNGVAE 444


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +3

Query: 501 GTNFVGACNELKGVLSNSDIASFMSQEGIDFNFSPPYSPHFNGLAE 638
           G N +   ++  G   +  +  F   +GI   F+  YSP  NG+AE
Sbjct: 134 GRNPIVIRSDQGGEYKSKRLGQFYRAKGIVPQFTAGYSPQQNGVAE 179


>AJ973470-1|CAJ01517.1|  117|Anopheles gambiae hypothetical protein
           protein.
          Length = 117

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 167 LSKTVVRNCLKCFRYRAQNVQPI 235
           L + + RNC  C   +AQN Q +
Sbjct: 73  LPEVIQRNCRNCSPQQAQNAQKL 95


>AJ697733-1|CAG26926.1|  117|Anopheles gambiae putative chemosensory
           protein CSP4 protein.
          Length = 117

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 167 LSKTVVRNCLKCFRYRAQNVQPI 235
           L + + RNC  C   +AQN Q +
Sbjct: 73  LPEVIQRNCRNCSPQQAQNAQKL 95


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +1

Query: 514  LVLATNSKASFQTQTLRHSCLKK 582
            LV AT ++   QT+ +RH+ L++
Sbjct: 1798 LVTATKTRKKQQTEAIRHAMLQQ 1820


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -3

Query: 418 AVTSSI*TAFTARHTKMHKYDFTNLQPRPLRISNQNWP 305
           +V S+   A    H      D+T LQP+   +S Q  P
Sbjct: 80  SVNSASTGAVGGGHQSTDMVDYTQLQPQKFLLSQQQQP 117


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 754,214
Number of Sequences: 2352
Number of extensions: 15775
Number of successful extensions: 32
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)