Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0448
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   4.0  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   9.2  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -3

Query: 272 VSCVTYEPKLRPTMQCQVGXYFL 204
           +SC++Y+P++   MQ   G  F+
Sbjct: 605 LSCISYDPEVDQAMQFAFGHSFI 627


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 14/55 (25%), Positives = 26/55 (47%)
 Frame = +2

Query: 275 ATSSTSTWDRWLYCSLRAVRPFSITSIFLLAADAVLSDG*PLQILMRGSGXGTFP 439
           A +S   + RW  CS+R      ++ +  +A D +L      Q +++ +  GT P
Sbjct: 318 AKTSLPGYSRWRTCSVREKDTAFVSELLGIATD-ILGKALRQQTVLQRTPSGTEP 371


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,861
Number of Sequences: 2352
Number of extensions: 9772
Number of successful extensions: 28
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)