Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0447
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    71   8e-15
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    71   8e-15
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    65   7e-13
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    25   0.49 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   3.4  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   3.4  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   3.4  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 71.3 bits (167), Expect = 8e-15
 Identities = 32/48 (66%), Positives = 37/48 (77%)
 Frame = +3

Query: 606 FDVSILTIEDGIFXVKSTAGDTHLGXEDFDNRMXNHFVQXFKXKXXKD 749
           FDVS+LTIE+GIF VK+TAGDTHLG EDFDNR+  +  Q FK K   D
Sbjct: 33  FDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVEYCTQDFKKKHKAD 80



 Score = 64.5 bits (150), Expect = 9e-13
 Identities = 30/33 (90%), Positives = 30/33 (90%)
 Frame = +2

Query: 509 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 607
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTF
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDLGGGTF 33


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 71.3 bits (167), Expect = 8e-15
 Identities = 32/48 (66%), Positives = 37/48 (77%)
 Frame = +3

Query: 606 FDVSILTIEDGIFXVKSTAGDTHLGXEDFDNRMXNHFVQXFKXKXXKD 749
           FDVS+LTIE+GIF VK+TAGDTHLG EDFDNR+  +  Q FK K   D
Sbjct: 33  FDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVEYCTQDFKKKHKAD 80



 Score = 64.5 bits (150), Expect = 9e-13
 Identities = 30/33 (90%), Positives = 30/33 (90%)
 Frame = +2

Query: 509 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 607
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTF
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDLGGGTF 33


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 64.9 bits (151), Expect = 7e-13
 Identities = 27/48 (56%), Positives = 38/48 (79%)
 Frame = +3

Query: 606 FDVSILTIEDGIFXVKSTAGDTHLGXEDFDNRMXNHFVQXFKXKXXKD 749
           FDVSILTI++G+F V +T+GDTHLG EDFD ++ ++F++  K K  KD
Sbjct: 32  FDVSILTIDNGVFEVVATSGDTHLGGEDFDQKVMDYFIKMVKQKHKKD 79



 Score = 60.1 bits (139), Expect = 2e-11
 Identities = 27/33 (81%), Positives = 31/33 (93%)
 Frame = +2

Query: 509 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 607
           INEPTAAAIAYGLDKKG  E+N+L++DLGGGTF
Sbjct: 1   INEPTAAAIAYGLDKKG-AEQNILVYDLGGGTF 32


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 22/101 (21%), Positives = 42/101 (41%), Gaps = 5/101 (4%)
 Frame = +2

Query: 242 AMNPNNTIFDAK--RLIGRKFEDATVQADMKHWPFE-VVSSMVLTKMKETAEAYLGKTVQ 412
           A NP    + +    L+ R+  D  + A +K+W      S+ ++  +     A+      
Sbjct: 252 ARNPKEADYPSPLYELVDRR-NDENIDAQVKYWMSNGAPSAKIVLGLPTFGRAWAMDDES 310

Query: 413 NAVITVPAYFNDSQRQA--TKDAGTISGLNVLRIINEPTAA 529
           +   T P + +        TKDAG +S   +  ++N+P  A
Sbjct: 311 DINGTPPLHISGPAEAGPLTKDAGLLSYPEICTLLNDPQNA 351


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -3

Query: 661 AVDFTSKIPSSMVRMDTSKGTAAEVKDKYIS 569
           A DF ++   + + + TS  T A+V +KY+S
Sbjct: 422 AFDFVARNSDTPIILWTSHLTQADVIEKYLS 452


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 124 LPAREGGDHRQRPGQQDH 177
           +P R+  DHR RP +  H
Sbjct: 246 IPIRQCDDHRDRPPRHFH 263


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
 Frame = +1

Query: 352 FH-GAYENEGNCRSL---SWQNCA---ECSYHGSRVLQ*LSKTSHKRCR 477
           FH GA+  EG C+S    ++ N +   EC  +G  V+   ++T+ K CR
Sbjct: 15  FHFGAFTCEG-CKSFFGRTYNNISSISECKNNGECVINKKNRTACKACR 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,620
Number of Sequences: 336
Number of extensions: 3956
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)