Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0447
(750 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 291 5e-80
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 283 2e-77
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 262 3e-71
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 256 3e-69
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 214 1e-56
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 107 1e-24
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 84 2e-17
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 58 1e-09
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 30 0.40
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.94
SPCC1183.04c |pet127||mitochondrial membrane protein Pet127|Schi... 29 0.94
SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchang... 27 2.2
SPBC25H2.05 |egd2|nac1|nascent polypeptide-associated complex al... 27 3.8
SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting pr... 26 5.0
SPBC18H10.11c |||conserved fungal protein|Schizosaccharomyces po... 25 8.7
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 8.7
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 25 8.7
SPBC1778.07 |||methyltransferase N2227 family|Schizosaccharomyce... 25 8.7
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 291 bits (715), Expect = 5e-80
Identities = 148/200 (74%), Positives = 162/200 (81%), Gaps = 24/200 (12%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 259
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 260 TIFDAKRLIGRKFEDATVQADMKHWPFEV------------------------VSSMVLT 367
TIFDAKRLIGRKF+D VQ+DMKHWPF+V +SSMVL
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLM 123
Query: 368 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 547
KM+ETAEAYLG V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGL
Sbjct: 124 KMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL 183
Query: 548 DKKGTGERNVLIFDLGGGTF 607
D+ GE NVLIFDLGGGTF
Sbjct: 184 DRSNQGESNVLIFDLGGGTF 203
Score = 81.0 bits (191), Expect = 2e-16
Identities = 35/48 (72%), Positives = 41/48 (85%)
Frame = +3
Query: 606 FDVSILTIEDGIFXVKSTAGDTHLGXEDFDNRMXNHFVQXFKXKXXKD 749
FDVS+LTIE+GIF VK+TAGDTHLG EDFD+R+ NHF+Q FK K KD
Sbjct: 203 FDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFIQEFKRKNKKD 250
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 283 bits (694), Expect = 2e-77
Identities = 144/200 (72%), Positives = 160/200 (80%), Gaps = 24/200 (12%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 259
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 260 TIFDAKRLIGRKFEDATVQADMKHWPFEV------------------------VSSMVLT 367
TIFDAKRLIGR+F D VQ+DMKHWPF+V +SSMVL
Sbjct: 64 TIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLL 123
Query: 368 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 547
KM+E+AEA+LG V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGL
Sbjct: 124 KMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL 183
Query: 548 DKKGTGERNVLIFDLGGGTF 607
D+ E NVLIFDLGGGTF
Sbjct: 184 DRSNQHETNVLIFDLGGGTF 203
Score = 79.8 bits (188), Expect = 4e-16
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +3
Query: 606 FDVSILTIEDGIFXVKSTAGDTHLGXEDFDNRMXNHFVQXFKXKXXKD 749
FDVS+LTIE+GIF VK+TAGDTHLG EDFD+R+ NHF Q FK K KD
Sbjct: 203 FDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFAQEFKRKNKKD 250
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 262 bits (643), Expect = 3e-71
Identities = 134/200 (67%), Positives = 152/200 (76%), Gaps = 24/200 (12%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 259
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP N
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67
Query: 260 TIFDAKRLIGRKFEDATVQADMKHWPFEV------------------------VSSMVLT 367
T+FDAKRLIGR++ED Q D+KHWPF+V +S+MVLT
Sbjct: 68 TVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLT 127
Query: 368 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 547
KMKE +EA L K V+ AVITVPAYF+DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGL
Sbjct: 128 KMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGL 187
Query: 548 DKKGTGERNVLIFDLGGGTF 607
D K +NVLIFDLGGGTF
Sbjct: 188 DAKSDKPKNVLIFDLGGGTF 207
Score = 66.9 bits (156), Expect = 3e-12
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +3
Query: 606 FDVSILTIEDGIFXVKSTAGDTHLGXEDFDNRMXNHFVQXFKXKXXKD 749
FDVS+L I+ G+F V +TAGDTHLG EDFDN + HF+Q FK K D
Sbjct: 207 FDVSLLKIQGGVFEVLATAGDTHLGGEDFDNALVEHFIQEFKRKQKID 254
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 256 bits (626), Expect = 3e-69
Identities = 127/199 (63%), Positives = 156/199 (78%), Gaps = 24/199 (12%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 262
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP NT
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 263 IFDAKRLIGRKFEDATVQADMKHWPFEVV------------------------SSMVLTK 370
IFD KRLIGRKF++ T+ D+K +PF +V S+M+L+K
Sbjct: 98 IFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSK 157
Query: 371 MKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 550
MK+TAEAYLGK V +AV+TVPAYFND+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLD
Sbjct: 158 MKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLD 217
Query: 551 KKGTGERNVLIFDLGGGTF 607
K T E++++++DLGGGTF
Sbjct: 218 KTDT-EKHIVVYDLGGGTF 235
Score = 61.3 bits (142), Expect = 1e-10
Identities = 25/48 (52%), Positives = 36/48 (75%)
Frame = +3
Query: 606 FDVSILTIEDGIFXVKSTAGDTHLGXEDFDNRMXNHFVQXFKXKXXKD 749
FDVS+L+I++G+F V +T+GDTHLG EDFDNR+ N+ + + K D
Sbjct: 235 FDVSLLSIDNGVFEVLATSGDTHLGGEDFDNRVINYLARTYNRKNNVD 282
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 214 bits (522), Expect = 1e-56
Identities = 115/219 (52%), Positives = 147/219 (67%), Gaps = 22/219 (10%)
Frame = +2
Query: 17 SRVFLRTSNKTD*KYKMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF 196
SR+ R ++ K+ K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAF
Sbjct: 32 SRMTARWNSNASGNEKV-KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAF 90
Query: 197 T-DTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS------- 352
T D ERL+G +AK Q +NP NT F KRLIGR+F++ VQ D+K P+++V
Sbjct: 91 TKDGERLVGVSAKRQAVINPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGDAW 150
Query: 353 --------------SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 490
+L+KM+ETA YLGK V+NAV+TVPAYFNDSQRQATK AG I+G
Sbjct: 151 LEARGKTYSPSQIGGFILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAG 210
Query: 491 LNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 607
LNVLR++NEPTAAA+AYGLDKK + V +FDLGGGTF
Sbjct: 211 LNVLRVVNEPTAAALAYGLDKK--NDAIVAVFDLGGGTF 247
Score = 58.4 bits (135), Expect = 1e-09
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = +3
Query: 606 FDVSILTIEDGIFXVKSTAGDTHLGXEDFDNRMXNHFVQXFKXKXXKD 749
FD+SIL + +G+F V+ST GDTHLG EDFD + H V+ FK D
Sbjct: 247 FDISILELNNGVFEVRSTNGDTHLGGEDFDVALVRHIVETFKKNEGLD 294
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 107 bits (258), Expect = 1e-24
Identities = 69/209 (33%), Positives = 111/209 (53%), Gaps = 29/209 (13%)
Frame = +2
Query: 68 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 247
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 248 NPNNTIFDAKRLIGRKFEDATVQ-------------------ADMKHWPFEVVSSMV--- 361
N NT+ KRL GR ++D ++ A +++ E S +
Sbjct: 63 NFRNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLI 122
Query: 362 ---LTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 532
TK+K AEA L +V + VI++PA+F D QR+A +A I+GLN LR++N+ AAA
Sbjct: 123 AAYFTKIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAA 182
Query: 533 IAYGLDKKGTGE----RNVLIFDLGGGTF 607
+ YG+ K E R V I D G +
Sbjct: 183 LTYGITKTDLPEPESPRRVAIVDFGHSNY 211
Score = 36.3 bits (80), Expect = 0.005
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +3
Query: 606 FDVSILTIEDGIFXVKSTAGDTHLGXEDFDNRMXNHFVQXFKXKXXKD 749
+ VSI+ G F +KST D +LG + D + ++F FK K D
Sbjct: 211 YSVSIVEFSRGQFHIKSTVCDRNLGSRNMDKALIDYFAAEFKEKYKID 258
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 84.2 bits (199), Expect = 2e-17
Identities = 54/199 (27%), Positives = 101/199 (50%), Gaps = 28/199 (14%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 262
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N +N+
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNS 86
Query: 263 IFDAKRLIGRKFEDAT----------------------VQADMKHWPFEVV------SSM 358
+ + + L+G+ ++ T VQ D + P E + S
Sbjct: 87 VTNFRDLLGKSHDELTLHHCHYSANPVNVEGQIGFKITVQEDEESDPKEKILTAHEASVR 146
Query: 359 VLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIA 538
L ++ E+AE +LG V V++VP YF D+QR+A + A +GL VL++I++P A +A
Sbjct: 147 HLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAGLPVLQLIHDPAAVILA 206
Query: 539 YGLDKKGTGERNVLIFDLG 595
++ ++ V++ + G
Sbjct: 207 LMYSEEVLIDKTVVVANFG 225
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 58.0 bits (134), Expect = 1e-09
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 28/202 (13%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 259
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P +
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAH 84
Query: 260 TIFDAKRLIG---------RKF------------EDAT-----VQADMKHWPFEVVSSMV 361
+I + K L+ +K+ E+ T V +D +++ E + +M
Sbjct: 85 SIRNVKELLDTAGLESVLVQKYQSSYPAIQLVENEETTSGISFVISDEENYSLEEIIAMT 144
Query: 362 LTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAY 541
+ AE + + + V+TVP +FN+ QR +A I +VL +I++ A AI Y
Sbjct: 145 MEHYISLAEEMAHEKITDLVLTVPPHFNELQRSILLEAARILNKHVLALIDDNVAVAIEY 204
Query: 542 GLDKK-GTGERNVLIFDLGGGT 604
L + T +I+D G G+
Sbjct: 205 SLSRSFSTDPTYNIIYDSGSGS 226
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 29.9 bits (64), Expect = 0.40
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Frame = +2
Query: 188 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSSMV-- 361
+ F+D E GD A + P + AK L+G+ + + D P++V+ +
Sbjct: 125 IIFSDDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPYQVLYDRLGP 184
Query: 362 LTKMKE-TAEAYLGKTVQNAVITVPAYFNDSQRQAT-KDAGTISGLNVLRIINEPTAAAI 535
L M + T ++ + +Q A T F S R A+ ++ + + ++++ +N T AAI
Sbjct: 185 LKLMIDGTVRNFIAQGLQYAGFTT---FGVSPRVASLREIKSPAEVDIMSRVNIATVAAI 241
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.94
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 75 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 170
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPCC1183.04c |pet127||mitochondrial membrane protein
Pet127|Schizosaccharomyces pombe|chr 3|||Manual
Length = 524
Score = 28.7 bits (61), Expect = 0.94
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -3
Query: 514 IDDSENVQARD-GTCIFCGLSLRVIE-VRGNRDNCILHSFAKISFGSFLHFRKHHGTDNL 341
+D +N++A+ FC L + ++ V G + + H K ++ HFRK DNL
Sbjct: 425 LDGQKNLEAKTVSPSNFCALEVCALQFVNGVHKSVVKHLDEKETWSIKYHFRKPRDQDNL 484
Query: 340 ER 335
R
Sbjct: 485 LR 486
>SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchange
factor Sec73 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 27.5 bits (58), Expect = 2.2
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +2
Query: 161 QGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIF-DAKRLIGRKFEDATVQADMKHWP 337
Q +R+ P T+R + +N+ ++ T+ D + + E++ + +D+K P
Sbjct: 287 QSSRSRPRSSTIP-TQRTLERLRENRSSIFSFRTLRRDDDECVAQTIENSALFSDIKPNP 345
Query: 338 FEVVSSMVLTKMKETAEAYLGK 403
+ +SS+ +TAE+YL K
Sbjct: 346 TKFLSSVPELTADDTAESYLSK 367
>SPBC25H2.05 |egd2|nac1|nascent polypeptide-associated complex alpha
subunit Egd2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 26.6 bits (56), Expect = 3.8
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 344 VVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATK 469
+++ ++ K A LGK + FN+SQ+QAT+
Sbjct: 56 IINEPIVYKSSNNAYIVLGKVTVEDMAAQARAFNESQKQATE 97
>SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting
protein homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 455
Score = 26.2 bits (55), Expect = 5.0
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -3
Query: 430 NRDNCILHSFAKISFGSFLHFRKHHGTDNLERPVLHVGLHSS 305
+ D L + K+ S H K NL RP+ H LHSS
Sbjct: 385 DEDQDELDNLTKVEGQSHSHNPKAPVIRNLPRPIYHQDLHSS 426
>SPBC18H10.11c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 432
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 344 VVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGT 481
V+ SM++ +K+T + Y G + ++ + FN QR+ GT
Sbjct: 208 VLVSMIIPSIKQTLDFYSGSQILR-LLNDFSMFNPEQREEVLKMGT 252
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.4 bits (53), Expect = 8.7
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +1
Query: 61 QNGKSTRSRNRSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCRQEPG 240
+NGK T +R +S + W P++E R G D + V R + + +EP
Sbjct: 477 RNGKKTPTRTKSRMQQFINWFKPSKE----RSSNGNSDSASPPPVPRLSITRSQVSREP- 531
Query: 241 GDEPQQ 258
++P++
Sbjct: 532 -EKPEE 536
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 8.7
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -2
Query: 161 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCI 57
G W SP S + H ++++ +F +RVL C+
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCM 310
>SPBC1778.07 |||methyltransferase N2227 family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 373
Score = 25.4 bits (53), Expect = 8.7
Identities = 11/45 (24%), Positives = 20/45 (44%)
Frame = -3
Query: 478 TCIFCGLSLRVIEVRGNRDNCILHSFAKISFGSFLHFRKHHGTDN 344
TC F + +++ NC++ I+ G L+ + GT N
Sbjct: 261 TCFFIDTTKNILDYLDTIKNCLVDGGYWINLGPLLYHFESEGTSN 305
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,113,153
Number of Sequences: 5004
Number of extensions: 66355
Number of successful extensions: 216
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 213
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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