Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0447
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 308 2e-84
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 308 2e-84
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 265 2e-71
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 7e-47
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 149 2e-36
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 92 5e-19
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 2e-16
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 9e-12
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 4e-08
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 7e-04
SB_50928| Best HMM Match : 7tm_2 (HMM E-Value=4.7e-07) 33 0.33
SB_40980| Best HMM Match : ANF_receptor (HMM E-Value=0.00014) 33 0.33
SB_53077| Best HMM Match : SRP54_N (HMM E-Value=1.8) 32 0.57
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 1.00
SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_53662| Best HMM Match : Protamine_P2 (HMM E-Value=9.2) 31 1.3
SB_33833| Best HMM Match : DUF947 (HMM E-Value=0.2) 31 1.3
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 31 1.3
SB_1210| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026) 30 2.3
SB_23942| Best HMM Match : 5-nucleotidase (HMM E-Value=4) 29 3.0
SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88) 29 3.0
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 3.0
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 4.0
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 4.0
SB_20217| Best HMM Match : Amidase (HMM E-Value=2.3e-21) 28 7.0
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 28 7.0
SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) 28 9.3
SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05) 28 9.3
SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2) 28 9.3
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 308 bits (757), Expect = 2e-84
Identities = 158/205 (77%), Positives = 167/205 (81%), Gaps = 24/205 (11%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 245 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEV------------------------VS 352
MNP NT+FDAKRLIGRKF+D V DM HWPF V +S
Sbjct: 61 MNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEIS 120
Query: 353 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 532
SMVLTKMKETAEAYLG V +AV+TVPAYF+DSQRQATKDAGTI+GLNVLRIINEPTAAA
Sbjct: 121 SMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 533 IAYGLDKKGTGERNVLIFDLGGGTF 607
IAYGLDKK ERNVLI+DLGGGTF
Sbjct: 181 IAYGLDKKVGVERNVLIYDLGGGTF 205
Score = 83.0 bits (196), Expect = 2e-16
Identities = 37/48 (77%), Positives = 41/48 (85%)
Frame = +3
Query: 606 FDVSILTIEDGIFXVKSTAGDTHLGXEDFDNRMXNHFVQXFKXKXXKD 749
FDVS+LTIEDGIF VKSTAGDTHLG EDFDN+M +HFV+ FK K KD
Sbjct: 205 FDVSVLTIEDGIFEVKSTAGDTHLGGEDFDNKMVDHFVKQFKQKYKKD 252
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 308 bits (757), Expect = 2e-84
Identities = 154/205 (75%), Positives = 172/205 (83%), Gaps = 24/205 (11%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 245 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEV------------------------VS 352
+NP NTIFDAKRLIGR+++DATVQ+DMK WPF++ +S
Sbjct: 61 LNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEIS 120
Query: 353 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 532
SMVL KMKETAEAYLG+ V +AVITVPAYFNDSQRQATKDAGTI+GLNVLR+INEPTAAA
Sbjct: 121 SMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLNVLRVINEPTAAA 180
Query: 533 IAYGLDKKGTGERNVLIFDLGGGTF 607
+AYGLDK +GE+NVLIFDLGGGTF
Sbjct: 181 LAYGLDKSLSGEKNVLIFDLGGGTF 205
Score = 78.2 bits (184), Expect = 7e-15
Identities = 37/49 (75%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Frame = +3
Query: 606 FDVSILTIEDG-IFXVKSTAGDTHLGXEDFDNRMXNHFVQXFKXKXXKD 749
FDVSILTI+DG +F VKSTAGDTHLG EDFDNR+ NHFV FK K KD
Sbjct: 205 FDVSILTIDDGSLFEVKSTAGDTHLGGEDFDNRLVNHFVAEFKRKYKKD 253
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 265 bits (650), Expect = 2e-71
Identities = 136/200 (68%), Positives = 159/200 (79%), Gaps = 25/200 (12%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNN 259
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP N
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763
Query: 260 TIFDAKRLIGRKFEDATVQADMKHWPFEVV------------------------SSMVLT 367
T+FDAKRLIGR ++D +VQ D+K +PF+VV S+MVLT
Sbjct: 764 TVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVLT 823
Query: 368 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 547
KMKETAEAYLGK V +AV+TVPAYFND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+
Sbjct: 824 KMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGM 883
Query: 548 DKKGTGERNVLIFDLGGGTF 607
DKK GE+N+L+FDLGGGTF
Sbjct: 884 DKK-EGEKNILVFDLGGGTF 902
Score = 63.7 bits (148), Expect = 2e-10
Identities = 26/48 (54%), Positives = 36/48 (75%)
Frame = +3
Query: 606 FDVSILTIEDGIFXVKSTAGDTHLGXEDFDNRMXNHFVQXFKXKXXKD 749
FDVS+LTI++G+F V +T GDTHLG EDFD + HF++ +K K K+
Sbjct: 902 FDVSLLTIDNGVFEVVATNGDTHLGGEDFDQNVMEHFIKLYKKKKGKN 949
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 184 bits (448), Expect = 7e-47
Identities = 85/104 (81%), Positives = 92/104 (88%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 245 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSSMVLTKMK 376
MNP NTIFDAKRLIGR+F+D V+ DMKHW FEVV+ K+K
Sbjct: 61 MNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVK 104
Score = 153 bits (371), Expect = 1e-37
Identities = 76/87 (87%), Positives = 79/87 (90%)
Frame = +2
Query: 347 VSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTA 526
+SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPTA
Sbjct: 212 ISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPTA 271
Query: 527 AAIAYGLDKKGTGERNVLIFDLGGGTF 607
AAIAYGLDKK ERNVLIFDLGGGTF
Sbjct: 272 AAIAYGLDKKVGQERNVLIFDLGGGTF 298
Score = 80.2 bits (189), Expect = 2e-15
Identities = 41/64 (64%), Positives = 47/64 (73%)
Frame = +2
Query: 287 GRKFEDATVQADMKHWPFEVVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQAT 466
GR + + K + E +SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQAT
Sbjct: 124 GRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQAT 183
Query: 467 KDAG 478
KDAG
Sbjct: 184 KDAG 187
Score = 74.5 bits (175), Expect = 8e-14
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = +3
Query: 606 FDVSILTIEDGIFXVKSTAGDTHLGXEDFDNRMXNHFVQXFKXKXXKD 749
FDVS+L+IEDGIF VKST GDTHLG EDFDN M + FV+ FK K KD
Sbjct: 298 FDVSVLSIEDGIFEVKSTHGDTHLGGEDFDNNMVDFFVKQFKQKYKKD 345
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 149 bits (362), Expect = 2e-36
Identities = 87/205 (42%), Positives = 120/205 (58%), Gaps = 27/205 (13%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 245 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEV-------------------------V 349
+NP NTI+DAKR IG+ F + K + F V +
Sbjct: 90 INPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEI 149
Query: 350 SSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAA 529
V+ K++ AE L TV AV++VPA F+ QR AT A +++G+ VLR+INEPTAA
Sbjct: 150 GGYVIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRVINEPTAA 209
Query: 530 AIAYGLDKKGTGERNVLIFDLGGGT 604
A+AYGL KK G NV++ DLGGGT
Sbjct: 210 ALAYGLHKK-EGVANVMVVDLGGGT 233
Score = 36.7 bits (81), Expect = 0.020
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 609 DVSILTIEDGIFXVKSTAGDTHLGXEDFDNRMXNHFVQ 722
DVS+L I+ G+F + AG+ LG +DF+ R + +Q
Sbjct: 235 DVSLLNIQGGMFVTMAMAGNNRLGGQDFNARFMQYLLQ 272
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 91.9 bits (218), Expect = 5e-19
Identities = 57/104 (54%), Positives = 69/104 (66%), Gaps = 26/104 (25%)
Frame = +2
Query: 341 EVVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLN-------- 496
E +S++VL ++K AEA+LG+ V+ AVITVPA+FND+QRQATKDAGTI+GL+
Sbjct: 16 EQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAGTIAGLDVLSRTASE 75
Query: 497 ----------------VLRIINEPTAAAIAYGLDKK--GTGERN 574
VLRIINEPTAAAIAYGLDK G ERN
Sbjct: 76 RPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLDKARGGKAERN 119
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 83.4 bits (197), Expect = 2e-16
Identities = 53/144 (36%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Frame = +2
Query: 248 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS------------------------- 352
N NTI KR IGRKF D VQ ++ H P++VV
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177
Query: 353 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 532
+M+ T++K TAE L V + VI+VP+Y+ D QR+ DA +GLN LR++N+ TA +
Sbjct: 178 AMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVS 237
Query: 533 IAYGLDKKG---TGERNVLIFDLG 595
+AYG+ K+ RNV+ D+G
Sbjct: 238 LAYGIYKQDLPTDKPRNVVFVDIG 261
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 238
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/46 (41%), Positives = 22/46 (47%)
Frame = +3
Query: 612 VSILTIEDGIFXVKSTAGDTHLGXEDFDNRMXNHFVQXFKXKXXKD 749
V I G V STA + +LG DFD + HF Q FK K D
Sbjct: 267 VCITAFLKGQLKVLSTAVEPNLGGRDFDYVLVEHFAQEFKTKYKID 312
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 67.7 bits (158), Expect = 9e-12
Identities = 39/128 (30%), Positives = 73/128 (57%), Gaps = 8/128 (6%)
Frame = +2
Query: 245 MNPNNTIFDAKRLIGRKFEDATV----QADMKHWPFEVVSSMVLTKMKETAEAYLGKTVQ 412
M+P+ + L+G+K ++ V Q+D+ P E++ M+L + E + ++
Sbjct: 48 MHPDKSYIYLHDLLGKKLDNPHVKNYQQSDVTFTPEELMG-MILNHSRFIGEQFADHPIK 106
Query: 413 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVL 580
+ V+TVP +FN ++R+A A + GLNVL+I+N TA A+ YGL ++ T E++ +
Sbjct: 107 DVVLTVPPFFNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFM 166
Query: 581 IFDLGGGT 604
+D+G +
Sbjct: 167 FYDMGASS 174
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 55.6 bits (128), Expect = 4e-08
Identities = 24/48 (50%), Positives = 32/48 (66%)
Frame = +3
Query: 606 FDVSILTIEDGIFXVKSTAGDTHLGXEDFDNRMXNHFVQXFKXKXXKD 749
FD+SIL I+ G+F VK+T GDT+LG EDFDN + + FK + D
Sbjct: 12 FDISILEIQKGVFEVKATNGDTYLGGEDFDNTLLKFLIAEFKKESGVD 59
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 134 GKVEIIANDQGNRTTPSYVAFTDTERLI 217
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_50928| Best HMM Match : 7tm_2 (HMM E-Value=4.7e-07)
Length = 1127
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Frame = +1
Query: 223 CRQEPGGDEPQQ-----HNIRCQTSHRT*VRRCYCASRHEALAFRGCQFHGAYENEGNCR 387
CR + G + +Q H++RC+ HR VRR Y RH R C + R
Sbjct: 609 CRNDYGDRDEEQIVLRVHHMRCEIPHRC-VRRKYRIRRHSPFRLRNCWEGRSVRASSLLR 667
Query: 388 SLSWQNCA 411
L+ CA
Sbjct: 668 QLAKGGCA 675
>SB_40980| Best HMM Match : ANF_receptor (HMM E-Value=0.00014)
Length = 735
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +1
Query: 223 CRQEPGGDEP--QQHNIRCQTSHRT*VRRCYCASRHEALAFRGCQFHGAYENEGNCRSLS 396
C QE G ++ + H++RC+ HR VRR Y RH R C + R L+
Sbjct: 521 CPQEIGKEQIVLRVHHMRCEIPHRC-VRRKYRIRRHSPFRLRNCWEGRSVRASSLLRQLA 579
Query: 397 WQNCA 411
CA
Sbjct: 580 KGGCA 584
>SB_53077| Best HMM Match : SRP54_N (HMM E-Value=1.8)
Length = 533
Score = 31.9 bits (69), Expect = 0.57
Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 14/88 (15%)
Frame = +1
Query: 190 CVHRHRASHRRCRQEPGGDEPQQ--------------HNIRCQTSHRT*VRRCYCASRHE 327
C R R S C++ PG D+P + H++RC+ HR VRR Y RH
Sbjct: 9 CSSRRR-SQLVCKRMPGADKPVRARQRVLAEQIVLRVHHMRCEIPHRC-VRRKYRIRRHS 66
Query: 328 ALAFRGCQFHGAYENEGNCRSLSWQNCA 411
R C + R L+ CA
Sbjct: 67 PFRLRNCWEGRSVRASSLLRQLAKGGCA 94
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 1.00
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +2
Query: 143 EIIANDQGNRTTPSYVAFT-DTERL 214
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3213
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +1
Query: 259 HNIRCQTSHRT*VRRCYCASRHEALAFRGCQFHGAYENEGNCRSLSWQNCA 411
H++RC+ HR VRR Y RH R C + R L+ CA
Sbjct: 452 HHMRCEIPHRC-VRRKYRIRRHSPFRLRNCWEGRSVRASSLLRQLAKGGCA 501
>SB_53662| Best HMM Match : Protamine_P2 (HMM E-Value=9.2)
Length = 253
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +1
Query: 259 HNIRCQTSHRT*VRRCYCASRHEALAFRGCQFHGAYENEGNCRSLSWQNCA 411
H++RC+ HR VRR Y RH R C + R L+ CA
Sbjct: 168 HHMRCEIPHRC-VRRKYRIRRHSPFRLRNCWEGRSVRASSLLRQLAKGGCA 217
>SB_33833| Best HMM Match : DUF947 (HMM E-Value=0.2)
Length = 1106
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +1
Query: 259 HNIRCQTSHRT*VRRCYCASRHEALAFRGCQFHGAYENEGNCRSLSWQNCA 411
H++RC+ HR VRR Y RH R C + R L+ CA
Sbjct: 894 HHMRCEIPHRC-VRRKYRIRRHSPFRLRNCWEGRSVRASSLLRQLAKGGCA 943
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +1
Query: 259 HNIRCQTSHRT*VRRCYCASRHEALAFRGCQFHGAYENEGNCRSLSWQNCA 411
H++RC+ HR VRR Y RH R C + R L+ CA
Sbjct: 242 HHMRCEIPHRC-VRRKYRIRRHSPFRLRNCWEGRSVRASSLLRQLAKGGCA 291
>SB_1210| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +1
Query: 259 HNIRCQTSHRT*VRRCYCASRHEALAFRGCQFHGAYENEGNCRSLSWQNCA 411
H++RC+ HR VRR Y RH R C + R L+ CA
Sbjct: 48 HHMRCEIPHRC-VRRKYRIRRHSPFRLRNCWEGRSVRASSLLRQLAKGGCA 97
>SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026)
Length = 1080
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Frame = +2
Query: 344 VVSSMVLTKMKETAEAYLGKT----------VQNAVITVPAYFNDSQRQATKDAGTISGL 493
+ + V K T+E Y+G T + NA +T+P YF + +K G G+
Sbjct: 989 IYQATVTRKDNNTSETYVGLTENSFKTRRNKIYNAPLTLPPYFWCHPSRKSKKDGAKEGM 1048
Query: 494 NVLRIINEPTAAAIAYGLDKKGTG 565
+ +++ I+Y LD+K TG
Sbjct: 1049 AM--AMSKERNQEISYKLDRKWTG 1070
>SB_23942| Best HMM Match : 5-nucleotidase (HMM E-Value=4)
Length = 735
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 566 ERNVLIFDLGGGTFRRVHPYHRGWYLRXEIHRRRHP 673
+R VL FD +HP+ RGWY R E R HP
Sbjct: 521 KRAVLAFDELIMAAAGLHPFQRGWYRRCE--RFHHP 554
>SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88)
Length = 953
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +1
Query: 151 RQRPGQQDHSVLCCVHRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASR 321
RQ + +++ H R +R+ ++ GG +EP + R T T C+CA R
Sbjct: 267 RQSAPSRSMAIINKTHGKRHGYRKLSRDCGGRRPNEPYERTARVHTILSTDTETCFCAKR 326
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -2
Query: 251 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 153
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 4.0
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 269 RILCCWGSSPPGSWRH 222
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 4.0
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 269 RILCCWGSSPPGSWRH 222
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_20217| Best HMM Match : Amidase (HMM E-Value=2.3e-21)
Length = 457
Score = 28.3 bits (60), Expect = 7.0
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Frame = +2
Query: 284 IGRKFEDATVQADMKHWPFEVVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQA 463
+GR ++DA +AD+ P + + +L + + + LGK + + T P F+ + A
Sbjct: 356 LGRDYDDALTKADVLVMPTNPMKARLLPTKETSVKDLLGKYGGHYINTCP--FDLTGHPA 413
Query: 464 TK-DAGTISGLNV-LRII----NEPTAAAIAYGLD 550
+AG GL V L I+ +E T +AY +
Sbjct: 414 LSINAGLSDGLPVGLMIVGKKYDEETILRVAYAFE 448
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 548 DKKGTGERNVLIFDLGGGTFRRVHPYHRGWYLRXEIHRRRHPL 676
D+ T +R++ + DLG T +++H HR + I RR H L
Sbjct: 363 DRGMTRQRSISMHDLGHETIQKIHFRHRA-SISHGIERRVHEL 404
>SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 654
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/44 (25%), Positives = 19/44 (43%)
Frame = +1
Query: 310 CASRHEALAFRGCQFHGAYENEGNCRSLSWQNCAECSYHGSRVL 441
C+S + +A C+ H Y+ + CS+HG V+
Sbjct: 84 CSSHGDCVASNTCRCHPGYQGSRCSEVADCSSFGNCSFHGECVI 127
>SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1774
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -3
Query: 583 DKYISFSSTLFVKTVSNRSSSRFIDDSEN 497
+K ISF +LF+ VSN S+ R+I +E+
Sbjct: 752 NKVISFGPSLFMDKVSNASAGRYICIAES 780
>SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05)
Length = 1264
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +1
Query: 196 HRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASRHEALA 336
H R +R+ + GG +EP + R T T C+CA R+ + A
Sbjct: 421 HGERHGYRKLSRVCGGRRPNEPYERTARVHTILSTDTETCFCAKRYGSAA 470
>SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2)
Length = 451
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -1
Query: 333 QCFMSACTVASSNLRPMRRLASNIVLLGFIATWFLAASPMRRSVSVNAT 187
QCF+S C + S + + R+ L TW + + M S +AT
Sbjct: 169 QCFLSVCDLCCSLMTQIPRMRHTWDFLEHAPTWISSQTSMSFSAITDAT 217
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,396,195
Number of Sequences: 59808
Number of extensions: 570579
Number of successful extensions: 1674
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1662
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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